RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 A1L4Q6 167 aa11.81□□□□□ -0.52
TNFRSF1B-203ENST00000492361 TMEM97Q5BJF2 176 aa11.81□□□□□ -0.52
TNFRSF1B-203ENST00000492361 TMEM158Q8WZ71 300 aa11.81□□□□□ -0.52
TNFRSF1B-203ENST00000492361 HOXB4P17483 251 aaPredicted RBP11.8□□□□□ -0.52
TNFRSF1B-203ENST00000492361 EFNA4P52798 201 aa11.8□□□□□ -0.52
TNFRSF1B-203ENST00000492361 RNASE4P34096 147 aaKnown RBP11.8□□□□□ -0.52
TNFRSF1B-203ENST00000492361 ATP5G2Q06055 141 aa11.8□□□□□ -0.52
TNFRSF1B-203ENST00000492361 FAM74A4Q5TZK3 123 aa11.8□□□□□ -0.52
TNFRSF1B-203ENST00000492361 GNLYP22749 145 aa11.8□□□□□ -0.52
TNFRSF1B-203ENST00000492361 NRGNQ92686 78 aa11.8□□□□□ -0.52
TNFRSF1B-203ENST00000492361 UTP20O75691 2785 aaKnown RBP11.8□□□□□ -0.52
TNFRSF1B-203ENST00000492361 AGPAT4-IT1Q9H0P7 198 aa11.79□□□□□ -0.52
TNFRSF1B-203ENST00000492361 LY6LH3BQJ8 138 aa11.79□□□□□ -0.52
TNFRSF1B-203ENST00000492361 TRBV12-3P01733 135 aa11.79□□□□□ -0.52
TNFRSF1B-203ENST00000492361 RIPPLY3P57055 190 aa11.79□□□□□ -0.52
TNFRSF1B-203ENST00000492361 Q8N9W7 124 aa11.79□□□□□ -0.52
TNFRSF1B-203ENST00000492361 DUX5Q96PT3 197 aa11.79□□□□□ -0.52
TNFRSF1B-203ENST00000492361 SMAD5-AS1Q9Y6J3 95 aa11.79□□□□□ -0.52
TNFRSF1B-203ENST00000492361 ORAOV1Q8WV07 137 aa11.79□□□□□ -0.52
TNFRSF1B-203ENST00000492361 ZANQ9Y493 2812 aa11.79□□□□□ -0.52
TNFRSF1B-203ENST00000492361 FAM231BA6NCW3 169 aa11.78□□□□□ -0.52
TNFRSF1B-203ENST00000492361 K7ERJ3 54 aa11.78□□□□□ -0.52
TNFRSF1B-203ENST00000492361 TNFRSF6BO95407 300 aa11.78□□□□□ -0.52
TNFRSF1B-203ENST00000492361 KHDC1LQ5JSQ8 128 aa11.78□□□□□ -0.52
TNFRSF1B-203ENST00000492361 C14orf178Q8N769 122 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF1B-203ENST00000492361 OR11H6Q8NGC7 330 aa11.78□□□□□ -0.52
TNFRSF1B-203ENST00000492361 MSRB2Q9Y3D2 182 aa11.78□□□□□ -0.52
TNFRSF1B-203ENST00000492361 KIR3DS1Q14943 382 aa11.78□□□□□ -0.52
TNFRSF1B-203ENST00000492361 TMEM95Q3KNT9 176 aa11.78□□□□□ -0.52
TNFRSF1B-203ENST00000492361 EEF1AKMT3Q96AZ1 226 aa11.78□□□□□ -0.52
TNFRSF1B-203ENST00000492361 FN1P02751 2386 aaKnown RBP11.77□□□□□ -0.52
TNFRSF1B-203ENST00000492361 BSNQ9UPA5 3926 aa11.77□□□□□ -0.52
TNFRSF1B-203ENST00000492361 WI2-2373I1.2A0A1W2PRP0 233 aa11.77□□□□□ -0.53
TNFRSF1B-203ENST00000492361 TAX1BP3O14907 124 aa11.77□□□□□ -0.53
TNFRSF1B-203ENST00000492361 ZC2HC1BQ5TFG8 222 aa11.77□□□□□ -0.53
TNFRSF1B-203ENST00000492361 MYOZ3Q8TDC0 251 aa11.77□□□□□ -0.53
TNFRSF1B-203ENST00000492361 RNF5Q99942 180 aa11.77□□□□□ -0.53
TNFRSF1B-203ENST00000492361 NHP2Q9NX24 153 aaKnown RBP11.77□□□□□ -0.53
TNFRSF1B-203ENST00000492361 PHLDA3Q9Y5J5 127 aa11.77□□□□□ -0.53
TNFRSF1B-203ENST00000492361 AGRNO00468 2067 aa11.77□□□□□ -0.53
TNFRSF1B-203ENST00000492361 DTX2Q86UW9 622 aa11.77□□□□□ -0.53
TNFRSF1B-203ENST00000492361 PIP4P2Q8N4L2 257 aa11.77□□□□□ -0.53
TNFRSF1B-203ENST00000492361 SMIM12Q96EX1 92 aa11.77□□□□□ -0.53
TNFRSF1B-203ENST00000492361 HIST2H2BDQ6DRA6 164 aa11.76□□□□□ -0.53
TNFRSF1B-203ENST00000492361 ZNF502Q8TBZ5 544 aa11.76□□□□□ -0.53
TNFRSF1B-203ENST00000492361 SCRT2Q9NQ03 307 aa11.76□□□□□ -0.53
TNFRSF1B-203ENST00000492361 HIVEP2P31629 2446 aa11.76□□□□□ -0.53
TNFRSF1B-203ENST00000492361 M0R1W7 72 aa11.76□□□□□ -0.53
TNFRSF1B-203ENST00000492361 NBL1P41271 181 aa11.76□□□□□ -0.53
TNFRSF1B-203ENST00000492361 LYPD1Q8N2G4 141 aa11.76□□□□□ -0.53
TNFRSF1B-203ENST00000492361 ITPR1Q14643 2758 aa11.76□□□□□ -0.53
TNFRSF1B-203ENST00000492361 F8W735 103 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF1B-203ENST00000492361 H3BUX3 64 aa11.76□□□□□ -0.53
TNFRSF1B-203ENST00000492361 ATP5J2P56134 94 aa11.76□□□□□ -0.53
TNFRSF1B-203ENST00000492361 GAGE1Q13065 139 aa11.76□□□□□ -0.53
TNFRSF1B-203ENST00000492361 Q6AWC8 147 aa11.76□□□□□ -0.53
TNFRSF1B-203ENST00000492361 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.76□□□□□ -0.53
TNFRSF1B-203ENST00000492361 C8orf86Q6ZUL3 223 aa11.76□□□□□ -0.53
TNFRSF1B-203ENST00000492361 NPFFO15130 113 aa11.75□□□□□ -0.53
TNFRSF1B-203ENST00000492361 PRRC2AP48634 2157 aaKnown RBP11.75□□□□□ -0.53
TNFRSF1B-203ENST00000492361 NPIPB6E9PJ23 425 aa11.75□□□□□ -0.53
TNFRSF1B-203ENST00000492361 C19orf84I3L1E1 186 aa11.75□□□□□ -0.53
TNFRSF1B-203ENST00000492361 PAX8Q06710 450 aa11.75□□□□□ -0.53
TNFRSF1B-203ENST00000492361 ARL6IP6Q8N6S5 226 aa11.75□□□□□ -0.53
TNFRSF1B-203ENST00000492361 BLCAPP62952 87 aa11.74□□□□□ -0.53
TNFRSF1B-203ENST00000492361 GAGE12BA1L429 117 aa11.74□□□□□ -0.53
TNFRSF1B-203ENST00000492361 COX8AP10176 69 aa11.74□□□□□ -0.53
TNFRSF1B-203ENST00000492361 UNQ9165/PRO28630Q6UXU0 137 aa11.74□□□□□ -0.53
TNFRSF1B-203ENST00000492361 TTC9CQ8N5M4 171 aa11.74□□□□□ -0.53
TNFRSF1B-203ENST00000492361 ANKRD17O75179 2603 aaKnown RBP11.74□□□□□ -0.53
TNFRSF1B-203ENST00000492361 TRAV41A0A0B4J266 112 aa11.74□□□□□ -0.53
TNFRSF1B-203ENST00000492361 TGFAP01135 160 aa11.74□□□□□ -0.53
TNFRSF1B-203ENST00000492361 A6NDN8 102 aa11.73□□□□□ -0.53
TNFRSF1B-203ENST00000492361 SAP30O75446 220 aa11.73□□□□□ -0.53
TNFRSF1B-203ENST00000492361 LINC01545Q5VT33 79 aa11.73□□□□□ -0.53
TNFRSF1B-203ENST00000492361 NPBQ8NG41 125 aa11.73□□□□□ -0.53
TNFRSF1B-203ENST00000492361 OR2K2Q8NGT1 345 aa11.73□□□□□ -0.53
TNFRSF1B-203ENST00000492361 LINC00477Q96M19 166 aa11.73□□□□□ -0.53
TNFRSF1B-203ENST00000492361 PEF1Q9UBV8 284 aaKnown RBP11.73□□□□□ -0.53
TNFRSF1B-203ENST00000492361 TMEM8BA6NDV4 472 aa11.73□□□□□ -0.53
TNFRSF1B-203ENST00000492361 BUB3O43684 328 aa11.73□□□□□ -0.53
TNFRSF1B-203ENST00000492361 SMIM17P0DL12 118 aa11.73□□□□□ -0.53
TNFRSF1B-203ENST00000492361 PDE6HQ13956 83 aa11.73□□□□□ -0.53
TNFRSF1B-203ENST00000492361 LY6G5BQ8NDX9 201 aa11.73□□□□□ -0.53
TNFRSF1B-203ENST00000492361 OR10J6PQ8NGY7 276 aa11.73□□□□□ -0.53
TNFRSF1B-203ENST00000492361 JMJD8Q96S16 334 aa11.73□□□□□ -0.53
TNFRSF1B-203ENST00000492361 C11orf21Q9P2W6 132 aa11.73□□□□□ -0.53
TNFRSF1B-203ENST00000492361 A0A087WWL8 130 aa11.72□□□□□ -0.53
TNFRSF1B-203ENST00000492361 GNRH2O43555 120 aa11.72□□□□□ -0.53
TNFRSF1B-203ENST00000492361 RPS20P60866 119 aaKnown RBP11.72□□□□□ -0.53
TNFRSF1B-203ENST00000492361 OVOL3O00110 214 aa11.72□□□□□ -0.53
TNFRSF1B-203ENST00000492361 IGHV4-38-2P0DP08 117 aa11.72□□□□□ -0.53
TNFRSF1B-203ENST00000492361 SCGB1D4Q6XE38 83 aa11.72□□□□□ -0.53
TNFRSF1B-203ENST00000492361 CCDC140Q96MF4 163 aa11.72□□□□□ -0.53
TNFRSF1B-203ENST00000492361 MRPL35Q9NZE8 188 aaKnown RBP11.72□□□□□ -0.53
TNFRSF1B-203ENST00000492361 IGKV3D-20A0A0C4DH25 116 aa11.71□□□□□ -0.53
TNFRSF1B-203ENST00000492361 MRPS12O15235 138 aaKnown RBP11.71□□□□□ -0.53
TNFRSF1B-203ENST00000492361 HIST1H4GQ99525 98 aa11.71□□□□□ -0.53
TNFRSF1B-203ENST00000492361 CST9LQ9H4G1 147 aa11.71□□□□□ -0.53
TNFRSF1B-203ENST00000492361 SPCS1Q9Y6A9 102 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms