RNA–Protein interactions for RNA: ENST00000492190.5

LMNB1-206, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 738 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-206ENST00000492190 MAP1LC3B2A6NCE7 125 aa12.54□□□□□ -0.4
LMNB1-206ENST00000492190 C1QBP02746 253 aa12.54□□□□□ -0.4
LMNB1-206ENST00000492190 TCRAP04437 139 aa12.54□□□□□ -0.4
LMNB1-206ENST00000492190 SGK494Q96LW2 274 aa12.54□□□□□ -0.4
LMNB1-206ENST00000492190 LINC00467Q9BRT7 94 aa12.54□□□□□ -0.4
LMNB1-206ENST00000492190 MAP1LC3BQ9GZQ8 125 aa12.54□□□□□ -0.4
LMNB1-206ENST00000492190 NOP10Q9NPE3 64 aaKnown RBP12.54□□□□□ -0.4
LMNB1-206ENST00000492190 TIMM8BQ9Y5J9 83 aaPredicted RBP12.54□□□□□ -0.4
LMNB1-206ENST00000492190 LENEPQ9Y5L5 61 aa12.54□□□□□ -0.4
LMNB1-206ENST00000492190 PFDN1O60925 122 aa12.53□□□□□ -0.4
LMNB1-206ENST00000492190 DEFB130BP0DP73 79 aa12.53□□□□□ -0.4
LMNB1-206ENST00000492190 DEFB130AP0DP74 79 aa12.53□□□□□ -0.4
LMNB1-206ENST00000492190 UBE2G2P60604 165 aa12.53□□□□□ -0.4
LMNB1-206ENST00000492190 CCDC28AQ8IWP9 274 aa12.53□□□□□ -0.4
LMNB1-206ENST00000492190 C11orf72Q8NBR9 251 aa12.53□□□□□ -0.4
LMNB1-206ENST00000492190 TP53TG3Q9ULZ0 132 aa12.53□□□□□ -0.4
LMNB1-206ENST00000492190 LY6G6CO95867 125 aa12.52□□□□□ -0.41
LMNB1-206ENST00000492190 IGLV2-11P01706 119 aa12.52□□□□□ -0.41
LMNB1-206ENST00000492190 HTN3P15516 51 aa12.52□□□□□ -0.41
LMNB1-206ENST00000492190 ANXA2RQ3ZCQ2 193 aa12.52□□□□□ -0.41
LMNB1-206ENST00000492190 AKAP14Q86UN6 197 aa12.52□□□□□ -0.41
LMNB1-206ENST00000492190 EIF4E3Q8N5X7 224 aaKnown RBP12.52□□□□□ -0.41
LMNB1-206ENST00000492190 LINC00612Q8N6U2 182 aa12.52□□□□□ -0.41
LMNB1-206ENST00000492190 STOML3Q8TAV4 291 aa12.52□□□□□ -0.41
LMNB1-206ENST00000492190 EPDR1Q9UM22 224 aa12.52□□□□□ -0.41
LMNB1-206ENST00000492190 DNAH10Q8IVF4 4471 aa12.52□□□□□ -0.41
LMNB1-206ENST00000492190 IGHV1OR15-1A0A075B7D0 117 aa12.51□□□□□ -0.41
LMNB1-206ENST00000492190 FAM74A7A6NL05 159 aa12.51□□□□□ -0.41
LMNB1-206ENST00000492190 TCTAP57738 103 aa12.51□□□□□ -0.41
LMNB1-206ENST00000492190 Q6AWC8 147 aa12.51□□□□□ -0.41
LMNB1-206ENST00000492190 FAM213BQ8TBF2 198 aa12.51□□□□□ -0.41
LMNB1-206ENST00000492190 MBD3L1Q8WWY6 194 aa12.51□□□□□ -0.41
LMNB1-206ENST00000492190 GSN-AS1Q9NRJ2 163 aa12.51□□□□□ -0.41
LMNB1-206ENST00000492190 NACAE9PAV3 2078 aa12.5□□□□□ -0.41
LMNB1-206ENST00000492190 CBY3A6NI87 242 aa12.5□□□□□ -0.41
LMNB1-206ENST00000492190 UMAD1C9J7I0 102 aa12.5□□□□□ -0.41
LMNB1-206ENST00000492190 TPT1P13693 172 aaKnown RBP12.5□□□□□ -0.41
LMNB1-206ENST00000492190 LGALS9CQ6DKI2 356 aa12.5□□□□□ -0.41
LMNB1-206ENST00000492190 LINC00479Q96M42 142 aa12.5□□□□□ -0.41
LMNB1-206ENST00000492190 SERTM2A0A1B0GWG4 89 aa12.49□□□□□ -0.41
LMNB1-206ENST00000492190 SNURFLB1AK76 121 aa12.49□□□□□ -0.41
LMNB1-206ENST00000492190 F6UZH7 168 aa12.49□□□□□ -0.41
LMNB1-206ENST00000492190 RGS13O14921 159 aa12.49□□□□□ -0.41
LMNB1-206ENST00000492190 EIF5AP63241 154 aaKnown RBP12.49□□□□□ -0.41
LMNB1-206ENST00000492190 DAZ2Q13117 558 aaKnown RBP12.49□□□□□ -0.41
LMNB1-206ENST00000492190 MUC21Q5SSG8 566 aa12.49□□□□□ -0.41
LMNB1-206ENST00000492190 Q6ZTI0 123 aa12.49□□□□□ -0.41
LMNB1-206ENST00000492190 CYB561D1Q8N8Q1 229 aa12.49□□□□□ -0.41
LMNB1-206ENST00000492190 C8orf49Q96NF6 230 aa12.49□□□□□ -0.41
LMNB1-206ENST00000492190 TREM1Q9NP99 234 aa12.49□□□□□ -0.41
LMNB1-206ENST00000492190 PSG8Q9UQ74 426 aa12.49□□□□□ -0.41
LMNB1-206ENST00000492190 KLF12Q9Y4X4 402 aa12.49□□□□□ -0.41
LMNB1-206ENST00000492190 ZNF680Q8NEM1 530 aa12.48□□□□□ -0.41
LMNB1-206ENST00000492190 SFT2D1Q8WV19 159 aa12.48□□□□□ -0.41
LMNB1-206ENST00000492190 ATG101Q9BSB4 218 aa12.48□□□□□ -0.41
LMNB1-206ENST00000492190 TRAV34A0A0B4J273 112 aa12.47□□□□□ -0.41
LMNB1-206ENST00000492190 A0A1B0GV50 99 aa12.47□□□□□ -0.41
LMNB1-206ENST00000492190 GAGE12BA1L429 117 aa12.47□□□□□ -0.41
LMNB1-206ENST00000492190 GAGE7O76087 117 aa12.47□□□□□ -0.41
LMNB1-206ENST00000492190 GAGE12FP0CL80 117 aa12.47□□□□□ -0.41
LMNB1-206ENST00000492190 GAGE12GP0CL81 117 aa12.47□□□□□ -0.41
LMNB1-206ENST00000492190 GAGE12IP0CL82 117 aa12.47□□□□□ -0.41
LMNB1-206ENST00000492190 ZNF80P51504 273 aaPredicted RBP12.47□□□□□ -0.41
LMNB1-206ENST00000492190 TCL1AP56279 114 aa12.47□□□□□ -0.41
LMNB1-206ENST00000492190 FLI1Q01543 452 aaPredicted RBP12.47□□□□□ -0.41
LMNB1-206ENST00000492190 TMEM88Q6PEY1 159 aa12.47□□□□□ -0.41
LMNB1-206ENST00000492190 C9orf62Q8N4C0 152 aa12.47□□□□□ -0.41
LMNB1-206ENST00000492190 TMEM75Q8N9X5 138 aa12.47□□□□□ -0.41
LMNB1-206ENST00000492190 NDUFAF3Q9BU61 184 aa12.47□□□□□ -0.41
LMNB1-206ENST00000492190 PEX7O00628 323 aa12.46□□□□□ -0.41
LMNB1-206ENST00000492190 IFNA7P01567 189 aa12.46□□□□□ -0.41
LMNB1-206ENST00000492190 ATP5G1P05496 136 aa12.46□□□□□ -0.41
LMNB1-206ENST00000492190 ATP5G3P48201 142 aa12.46□□□□□ -0.41
LMNB1-206ENST00000492190 IBA57Q5T440 356 aaKnown RBP12.46□□□□□ -0.41
LMNB1-206ENST00000492190 DPPA3Q6W0C5 159 aa12.46□□□□□ -0.41
LMNB1-206ENST00000492190 PRNTQ86SH4 94 aa12.46□□□□□ -0.41
LMNB1-206ENST00000492190 K7EQM0 130 aa12.45□□□□□ -0.42
LMNB1-206ENST00000492190 FAM210BQ96KR6 192 aa12.45□□□□□ -0.42
LMNB1-206ENST00000492190 NKX6-2Q9C056 277 aaPredicted RBP12.45□□□□□ -0.42
LMNB1-206ENST00000492190 MDFICQ9P1T7 246 aa12.45□□□□□ -0.42
LMNB1-206ENST00000492190 C11orf21Q9P2W6 132 aa12.45□□□□□ -0.42
LMNB1-206ENST00000492190 F5H768 121 aa12.44□□□□□ -0.42
LMNB1-206ENST00000492190 SPINK4O60575 86 aa12.44□□□□□ -0.42
LMNB1-206ENST00000492190 PAGE4O60829 102 aa12.44□□□□□ -0.42
LMNB1-206ENST00000492190 H2AFB1P0C5Y9 115 aa12.44□□□□□ -0.42
LMNB1-206ENST00000492190 CCL20P78556 96 aa12.44□□□□□ -0.42
LMNB1-206ENST00000492190 TMEM183BQ1AE95 376 aa12.44□□□□□ -0.42
LMNB1-206ENST00000492190 TDRG1Q3Y452 100 aa12.44□□□□□ -0.42
LMNB1-206ENST00000492190 SLC51BQ86UW2 128 aa12.44□□□□□ -0.42
LMNB1-206ENST00000492190 TMEM183AQ8IXX5 376 aa12.44□□□□□ -0.42
LMNB1-206ENST00000492190 NAGKQ9UJ70 344 aa12.44□□□□□ -0.42
LMNB1-206ENST00000492190 FRAS1Q86XX4 4008 aa12.44□□□□□ -0.42
LMNB1-206ENST00000492190 DNAH2Q9P225 4427 aa12.43□□□□□ -0.42
LMNB1-206ENST00000492190 TRAV21A0A0B4J279 112 aa12.43□□□□□ -0.42
LMNB1-206ENST00000492190 GNRH2O43555 120 aa12.43□□□□□ -0.42
LMNB1-206ENST00000492190 GCGP01275 180 aa12.43□□□□□ -0.42
LMNB1-206ENST00000492190 HOXA5P20719 270 aa12.43□□□□□ -0.42
LMNB1-206ENST00000492190 CST9LP1Q5W188 147 aa12.43□□□□□ -0.42
LMNB1-206ENST00000492190 FAM159AQ6UWV7 190 aa12.43□□□□□ -0.42
LMNB1-206ENST00000492190 HIST1H2BAQ96A08 127 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms