RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 PPP1R1CQ8WVI7 109 aa5.75□□□□□ -1.49
SMARCB1-207ENST00000491967 TMED6Q8WW62 240 aa5.75□□□□□ -1.49
SMARCB1-207ENST00000491967 PHYHIPLQ96FC7 376 aa5.75□□□□□ -1.49
SMARCB1-207ENST00000491967 ATP5SQ99766 215 aa5.75□□□□□ -1.49
SMARCB1-207ENST00000491967 PAXXQ9BUH6 204 aa5.75□□□□□ -1.49
SMARCB1-207ENST00000491967 LENEPQ9Y5L5 61 aa5.75□□□□□ -1.49
SMARCB1-207ENST00000491967 ABCA13Q86UQ4 5058 aa5.75□□□□□ -1.49
SMARCB1-207ENST00000491967 LRP1BQ9NZR2 4599 aa5.74□□□□□ -1.49
SMARCB1-207ENST00000491967 TRGV2A0A075B6R0 118 aa5.74□□□□□ -1.49
SMARCB1-207ENST00000491967 IGHV1OR15-1A0A075B7D0 117 aa5.74□□□□□ -1.49
SMARCB1-207ENST00000491967 C16orf90A8MZG2 172 aa5.74□□□□□ -1.49
SMARCB1-207ENST00000491967 MPC2O95563 127 aa5.74□□□□□ -1.49
SMARCB1-207ENST00000491967 PTTG1O95997 202 aa5.74□□□□□ -1.49
SMARCB1-207ENST00000491967 OR10J4P0C629 311 aa5.74□□□□□ -1.49
SMARCB1-207ENST00000491967 FAM122CQ6P4D5 195 aa5.74□□□□□ -1.49
SMARCB1-207ENST00000491967 RASL10AQ92737 203 aa5.74□□□□□ -1.49
SMARCB1-207ENST00000491967 HSPB11Q9Y547 144 aa5.74□□□□□ -1.49
SMARCB1-207ENST00000491967 TRGV1A0A0A0MS02 117 aa5.73□□□□□ -1.49
SMARCB1-207ENST00000491967 DIRC3C9JPN6 131 aa5.73□□□□□ -1.49
SMARCB1-207ENST00000491967 C17orf112F2Z3M2 114 aa5.73□□□□□ -1.49
SMARCB1-207ENST00000491967 RGS13O14921 159 aa5.73□□□□□ -1.49
SMARCB1-207ENST00000491967 CRYBA4P53673 196 aa5.73□□□□□ -1.49
SMARCB1-207ENST00000491967 RANP62826 216 aaKnown RBP5.73□□□□□ -1.49
SMARCB1-207ENST00000491967 SLAQ13239 276 aa5.73□□□□□ -1.49
SMARCB1-207ENST00000491967 LRRC37A5PQ49AS3 106 aa5.73□□□□□ -1.49
SMARCB1-207ENST00000491967 WFDC1Q9HC57 220 aa5.73□□□□□ -1.49
SMARCB1-207ENST00000491967 MDFICQ9P1T7 246 aa5.73□□□□□ -1.49
SMARCB1-207ENST00000491967 PRO0255Q9UI72 69 aa5.73□□□□□ -1.49
SMARCB1-207ENST00000491967 PAX4O43316 350 aa5.72□□□□□ -1.49
SMARCB1-207ENST00000491967 RPL12P30050 165 aaKnown RBP5.72□□□□□ -1.49
SMARCB1-207ENST00000491967 KRTAP10-2P60368 255 aa5.72□□□□□ -1.49
SMARCB1-207ENST00000491967 LYPD5Q6UWN5 251 aa5.72□□□□□ -1.49
SMARCB1-207ENST00000491967 SPATA12Q7Z6I5 190 aa5.72□□□□□ -1.49
SMARCB1-207ENST00000491967 OR10G4Q8NGN3 311 aa5.72□□□□□ -1.49
SMARCB1-207ENST00000491967 Q8TAT8 98 aa5.72□□□□□ -1.49
SMARCB1-207ENST00000491967 SPXQ9BT56 116 aa5.72□□□□□ -1.49
SMARCB1-207ENST00000491967 HHLA3Q9XRX5 114 aa5.72□□□□□ -1.49
SMARCB1-207ENST00000491967 K7EP13 123 aa5.71□□□□□ -1.5
SMARCB1-207ENST00000491967 SIVA1O15304 175 aa5.71□□□□□ -1.5
SMARCB1-207ENST00000491967 OR7C2O60412 319 aa5.71□□□□□ -1.5
SMARCB1-207ENST00000491967 PET100P0DJ07 73 aa5.71□□□□□ -1.5
SMARCB1-207ENST00000491967 CSN1S1P47710 185 aa5.71□□□□□ -1.5
SMARCB1-207ENST00000491967 LINC00315P59091 139 aa5.71□□□□□ -1.5
SMARCB1-207ENST00000491967 TAS2R45P59539 299 aa5.71□□□□□ -1.5
SMARCB1-207ENST00000491967 UBE2L3P68036 154 aaKnown RBP5.71□□□□□ -1.5
SMARCB1-207ENST00000491967 MRPL23Q16540 153 aaKnown RBP5.71□□□□□ -1.5
SMARCB1-207ENST00000491967 KHDC3LQ587J8 217 aa5.71□□□□□ -1.5
SMARCB1-207ENST00000491967 FFAR4Q5NUL3 377 aa5.71□□□□□ -1.5
SMARCB1-207ENST00000491967 PQLC2Q6ZP29 291 aa5.71□□□□□ -1.5
SMARCB1-207ENST00000491967 SUN5Q8TC36 379 aa5.71□□□□□ -1.5
SMARCB1-207ENST00000491967 TVP23CQ96ET8 276 aa5.71□□□□□ -1.5
SMARCB1-207ENST00000491967 OTORQ9NRC9 128 aa5.71□□□□□ -1.5
SMARCB1-207ENST00000491967 MRPL16Q9NX20 251 aaKnown RBP5.71□□□□□ -1.5
SMARCB1-207ENST00000491967 MBD2Q9UBB5 411 aa5.71□□□□□ -1.5
SMARCB1-207ENST00000491967 ICOSQ9Y6W8 199 aa5.71□□□□□ -1.5
SMARCB1-207ENST00000491967 SSNA1O43805 119 aa5.7□□□□□ -1.5
SMARCB1-207ENST00000491967 NXPH4O95158 308 aa5.7□□□□□ -1.5
SMARCB1-207ENST00000491967 IFNA5P01569 189 aa5.7□□□□□ -1.5
SMARCB1-207ENST00000491967 ZNF415Q09FC8 603 aa5.7□□□□□ -1.5
SMARCB1-207ENST00000491967 NEGR1Q7Z3B1 354 aa5.7□□□□□ -1.5
SMARCB1-207ENST00000491967 Q8N1X5 172 aa5.7□□□□□ -1.5
SMARCB1-207ENST00000491967 SCGB1C1Q8TD33 95 aa5.7□□□□□ -1.5
SMARCB1-207ENST00000491967 ARPC5LQ9BPX5 153 aa5.7□□□□□ -1.5
SMARCB1-207ENST00000491967 ALG5Q9Y673 324 aa5.7□□□□□ -1.5
SMARCB1-207ENST00000491967 APOBP04114 4563 aaKnown RBP5.7□□□□□ -1.5
SMARCB1-207ENST00000491967 TRGV11A0A075B6L2 103 aa5.69□□□□□ -1.5
SMARCB1-207ENST00000491967 IGHV3-16A0A0C4DH30 117 aa5.69□□□□□ -1.5
SMARCB1-207ENST00000491967 PGPA6NDG6 321 aa5.69□□□□□ -1.5
SMARCB1-207ENST00000491967 K7EQD1 137 aa5.69□□□□□ -1.5
SMARCB1-207ENST00000491967 DNAH10OSP0CZ25 163 aa5.69□□□□□ -1.5
SMARCB1-207ENST00000491967 TIRAPP58753 221 aa5.69□□□□□ -1.5
SMARCB1-207ENST00000491967 ACOT6Q3I5F7 207 aaPredicted RBP5.69□□□□□ -1.5
SMARCB1-207ENST00000491967 MUC21Q5SSG8 566 aa5.69□□□□□ -1.5
SMARCB1-207ENST00000491967 OR2G3Q8NGZ4 309 aa5.69□□□□□ -1.5
SMARCB1-207ENST00000491967 ZNF479Q96JC4 524 aa5.69□□□□□ -1.5
SMARCB1-207ENST00000491967 C8orf49Q96NF6 230 aa5.69□□□□□ -1.5
SMARCB1-207ENST00000491967 SMIM3Q9BZL3 60 aa5.69□□□□□ -1.5
SMARCB1-207ENST00000491967 PGPEP1Q9NXJ5 209 aa5.69□□□□□ -1.5
SMARCB1-207ENST00000491967 TRAV4A0A0B4J268 109 aa5.68□□□□□ -1.5
SMARCB1-207ENST00000491967 M0R2P5 195 aa5.68□□□□□ -1.5
SMARCB1-207ENST00000491967 GNRH2O43555 120 aa5.68□□□□□ -1.5
SMARCB1-207ENST00000491967 IGLV2-11P01706 119 aa5.68□□□□□ -1.5
SMARCB1-207ENST00000491967 IGHV3-53P01767 116 aa5.68□□□□□ -1.5
SMARCB1-207ENST00000491967 ORM1P02763 201 aa5.68□□□□□ -1.5
SMARCB1-207ENST00000491967 STAG3L2P0CL84 134 aa5.68□□□□□ -1.5
SMARCB1-207ENST00000491967 STAG3L3P0CL85 134 aa5.68□□□□□ -1.5
SMARCB1-207ENST00000491967 TMEM183BQ1AE95 376 aa5.68□□□□□ -1.5
SMARCB1-207ENST00000491967 FAM159AQ6UWV7 190 aa5.68□□□□□ -1.5
SMARCB1-207ENST00000491967 TMEM183AQ8IXX5 376 aa5.68□□□□□ -1.5
SMARCB1-207ENST00000491967 MAPKAPK5-AS1Q8N8E1 139 aa5.68□□□□□ -1.5
SMARCB1-207ENST00000491967 MED28Q9H204 178 aa5.68□□□□□ -1.5
SMARCB1-207ENST00000491967 hCG_2014768A0A024R1R8 64 aa5.67□□□□□ -1.5
SMARCB1-207ENST00000491967 TRAV21A0A0B4J279 112 aa5.67□□□□□ -1.5
SMARCB1-207ENST00000491967 TRGV4A0A0C4DH28 118 aa5.67□□□□□ -1.5
SMARCB1-207ENST00000491967 SERTM2A0A1B0GWG4 89 aa5.67□□□□□ -1.5
SMARCB1-207ENST00000491967 EIF3GO75821 320 aaKnown RBP eCLIP5.67□□□□□ -1.5
SMARCB1-207ENST00000491967 SFTA3P0C7M3 94 aa5.67□□□□□ -1.5
SMARCB1-207ENST00000491967 GATA1P15976 413 aaPredicted RBP5.67□□□□□ -1.5
SMARCB1-207ENST00000491967 RAB2AP61019 212 aa5.67□□□□□ -1.5
SMARCB1-207ENST00000491967 FAM74A1Q5RGS3 127 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms