RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 DYNC1H1Q14204 4646 aaKnown RBP12.46□□□□□ -0.41
HMGN1-219ENST00000491183 DIRC3C9JPN6 131 aa12.46□□□□□ -0.41
HMGN1-219ENST00000491183 TAS2R45P59539 299 aa12.46□□□□□ -0.41
HMGN1-219ENST00000491183 TNP2Q05952 138 aa12.46□□□□□ -0.41
HMGN1-219ENST00000491183 ZNF266Q14584 549 aa12.46□□□□□ -0.41
HMGN1-219ENST00000491183 MUC4Q99102 2169 aa12.45□□□□□ -0.42
HMGN1-219ENST00000491183 A0A096LPF7 62 aa12.45□□□□□ -0.42
HMGN1-219ENST00000491183 ACOT6Q3I5F7 207 aaPredicted RBP12.45□□□□□ -0.42
HMGN1-219ENST00000491183 C6orf223Q8N319 242 aa12.45□□□□□ -0.42
HMGN1-219ENST00000491183 DNAH11Q96DT5 4516 aa12.44□□□□□ -0.42
HMGN1-219ENST00000491183 PGPA6NDG6 321 aa12.44□□□□□ -0.42
HMGN1-219ENST00000491183 RAB2AP61019 212 aa12.44□□□□□ -0.42
HMGN1-219ENST00000491183 HYLS1Q96M11 299 aa12.44□□□□□ -0.42
HMGN1-219ENST00000491183 UPK3BQ9BT76 320 aa12.44□□□□□ -0.42
HMGN1-219ENST00000491183 MRPL16Q9NX20 251 aaKnown RBP12.44□□□□□ -0.42
HMGN1-219ENST00000491183 MED14OSP0DP75 135 aa12.43□□□□□ -0.42
HMGN1-219ENST00000491183 MUC21Q5SSG8 566 aa12.43□□□□□ -0.42
HMGN1-219ENST00000491183 ARPC5LQ9BPX5 153 aa12.43□□□□□ -0.42
HMGN1-219ENST00000491183 KRTAP1-5Q9BYS1 174 aa12.43□□□□□ -0.42
HMGN1-219ENST00000491183 OTORQ9NRC9 128 aa12.43□□□□□ -0.42
HMGN1-219ENST00000491183 MDFICQ9P1T7 246 aa12.43□□□□□ -0.42
HMGN1-219ENST00000491183 LENEPQ9Y5L5 61 aa12.43□□□□□ -0.42
HMGN1-219ENST00000491183 A0A1W2PPV4 95 aa12.42□□□□□ -0.42
HMGN1-219ENST00000491183 HMGB3O15347 200 aaKnown RBP12.42□□□□□ -0.42
HMGN1-219ENST00000491183 IGHV3-53P01767 116 aa12.42□□□□□ -0.42
HMGN1-219ENST00000491183 Q6AWC8 147 aa12.42□□□□□ -0.42
HMGN1-219ENST00000491183 PQLC2Q6ZP29 291 aa12.42□□□□□ -0.42
HMGN1-219ENST00000491183 ZNF575Q86XF7 245 aa12.42□□□□□ -0.42
HMGN1-219ENST00000491183 OR10G4Q8NGN3 311 aa12.42□□□□□ -0.42
HMGN1-219ENST00000491183 OR10G9Q8NGN4 311 aa12.42□□□□□ -0.42
HMGN1-219ENST00000491183 OR10G7Q8NGN6 311 aa12.42□□□□□ -0.42
HMGN1-219ENST00000491183 ST6GAL2Q96JF0 529 aa12.42□□□□□ -0.42
HMGN1-219ENST00000491183 MRPS16Q9Y3D3 137 aaKnown RBP12.42□□□□□ -0.42
HMGN1-219ENST00000491183 PTTG1O95997 202 aa12.41□□□□□ -0.42
HMGN1-219ENST00000491183 ZNF415Q09FC8 603 aa12.41□□□□□ -0.42
HMGN1-219ENST00000491183 Q5BKY6 102 aa12.41□□□□□ -0.42
HMGN1-219ENST00000491183 TMED6Q8WW62 240 aa12.41□□□□□ -0.42
HMGN1-219ENST00000491183 FHL2Q14192 279 aa12.4□□□□□ -0.42
HMGN1-219ENST00000491183 CMTM2Q8TAZ6 248 aa12.4□□□□□ -0.42
HMGN1-219ENST00000491183 TVP23CQ96ET8 276 aa12.4□□□□□ -0.42
HMGN1-219ENST00000491183 AQP10Q96PS8 301 aa12.4□□□□□ -0.42
HMGN1-219ENST00000491183 MED28Q9H204 178 aa12.4□□□□□ -0.42
HMGN1-219ENST00000491183 RPH3ALQ9UNE2 315 aa12.4□□□□□ -0.42
HMGN1-219ENST00000491183 PAX4O43316 350 aa12.39□□□□□ -0.43
HMGN1-219ENST00000491183 FAM74A1Q5RGS3 127 aa12.39□□□□□ -0.43
HMGN1-219ENST00000491183 GOLT1AQ6ZVE7 132 aa12.39□□□□□ -0.43
HMGN1-219ENST00000491183 ARL6IP6Q8N6S5 226 aa12.39□□□□□ -0.43
HMGN1-219ENST00000491183 HSD17B11Q8NBQ5 300 aa12.39□□□□□ -0.43
HMGN1-219ENST00000491183 TRAV8-1A0A0A6YYK1 113 aa12.38□□□□□ -0.43
HMGN1-219ENST00000491183 ARL14EPLP0DKL9 152 aa12.38□□□□□ -0.43
HMGN1-219ENST00000491183 CRYBA4P53673 196 aa12.38□□□□□ -0.43
HMGN1-219ENST00000491183 GNG5P63218 68 aa12.38□□□□□ -0.43
HMGN1-219ENST00000491183 TMEM183BQ1AE95 376 aa12.38□□□□□ -0.43
HMGN1-219ENST00000491183 FAM159AQ6UWV7 190 aa12.38□□□□□ -0.43
HMGN1-219ENST00000491183 TMEM183AQ8IXX5 376 aa12.38□□□□□ -0.43
HMGN1-219ENST00000491183 OR2G3Q8NGZ4 309 aa12.38□□□□□ -0.43
HMGN1-219ENST00000491183 PRO0255Q9UI72 69 aa12.38□□□□□ -0.43
HMGN1-219ENST00000491183 GNRH2O43555 120 aa12.37□□□□□ -0.43
HMGN1-219ENST00000491183 STAG3L2P0CL84 134 aa12.37□□□□□ -0.43
HMGN1-219ENST00000491183 STAG3L3P0CL85 134 aa12.37□□□□□ -0.43
HMGN1-219ENST00000491183 ATP6V0CP27449 155 aa12.37□□□□□ -0.43
HMGN1-219ENST00000491183 CDC34P49427 236 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-219ENST00000491183 TDRG1Q3Y452 100 aa12.37□□□□□ -0.43
HMGN1-219ENST00000491183 TTC32Q5I0X7 151 aa12.37□□□□□ -0.43
HMGN1-219ENST00000491183 C8orf49Q96NF6 230 aa12.37□□□□□ -0.43
HMGN1-219ENST00000491183 PSMG3Q9BT73 122 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-219ENST00000491183 HHLA3Q9XRX5 114 aa12.37□□□□□ -0.43
HMGN1-219ENST00000491183 A0A1W2PPQ1 181 aa12.36□□□□□ -0.43
HMGN1-219ENST00000491183 SLAQ13239 276 aa12.36□□□□□ -0.43
HMGN1-219ENST00000491183 SUN5Q8TC36 379 aa12.36□□□□□ -0.43
HMGN1-219ENST00000491183 RASL10AQ92737 203 aa12.36□□□□□ -0.43
HMGN1-219ENST00000491183 RAB24Q969Q5 203 aa12.36□□□□□ -0.43
HMGN1-219ENST00000491183 ZNF479Q96JC4 524 aa12.36□□□□□ -0.43
HMGN1-219ENST00000491183 SPXQ9BT56 116 aa12.36□□□□□ -0.43
HMGN1-219ENST00000491183 ICOSQ9Y6W8 199 aa12.36□□□□□ -0.43
HMGN1-219ENST00000491183 TRGV11A0A075B6L2 103 aa12.35□□□□□ -0.43
HMGN1-219ENST00000491183 F6UZH7 168 aa12.35□□□□□ -0.43
HMGN1-219ENST00000491183 SFTA3P0C7M3 94 aa12.35□□□□□ -0.43
HMGN1-219ENST00000491183 SGK494Q96LW2 274 aa12.35□□□□□ -0.43
HMGN1-219ENST00000491183 SH3BGRL3Q9H299 93 aa12.35□□□□□ -0.43
HMGN1-219ENST00000491183 TREM1Q9NP99 234 aa12.35□□□□□ -0.43
HMGN1-219ENST00000491183 NAGKQ9UJ70 344 aa12.35□□□□□ -0.43
HMGN1-219ENST00000491183 GIPP09681 153 aaPredicted RBP12.34□□□□□ -0.43
HMGN1-219ENST00000491183 GCHFRP30047 84 aa12.34□□□□□ -0.43
HMGN1-219ENST00000491183 SERF2P84101 59 aa12.34□□□□□ -0.43
HMGN1-219ENST00000491183 IQCF2Q8IXL9 164 aa12.34□□□□□ -0.43
HMGN1-219ENST00000491183 PCLOQ9Y6V0 5065 aa12.33□□□□□ -0.44
HMGN1-219ENST00000491183 TRAV21A0A0B4J279 112 aa12.33□□□□□ -0.44
HMGN1-219ENST00000491183 TRGV4A0A0C4DH28 118 aa12.33□□□□□ -0.44
HMGN1-219ENST00000491183 IGHV3-16A0A0C4DH30 117 aa12.33□□□□□ -0.44
HMGN1-219ENST00000491183 RNF222A6NCQ9 220 aa12.33□□□□□ -0.44
HMGN1-219ENST00000491183 LYPD5Q6UWN5 251 aa12.33□□□□□ -0.44
HMGN1-219ENST00000491183 C16orf90A8MZG2 172 aa12.32□□□□□ -0.44
HMGN1-219ENST00000491183 SIVA1O15304 175 aa12.32□□□□□ -0.44
HMGN1-219ENST00000491183 MBP02144 154 aa12.32□□□□□ -0.44
HMGN1-219ENST00000491183 TCRAP04437 139 aa12.32□□□□□ -0.44
HMGN1-219ENST00000491183 TYMSP04818 313 aa12.32□□□□□ -0.44
HMGN1-219ENST00000491183 MRPL23Q16540 153 aaKnown RBP12.32□□□□□ -0.44
HMGN1-219ENST00000491183 RPL7L1Q6DKI1 246 aaKnown RBP12.32□□□□□ -0.44
HMGN1-219ENST00000491183 TNFSF18Q9UNG2 199 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms