RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 TRAV8-6A0A0B4J262 113 aa7.83□□□□□ -1.16
HDAC9-225ENST00000490851 TRGV3P03979 118 aa7.83□□□□□ -1.16
HDAC9-225ENST00000490851 CTSGP08311 255 aa7.83□□□□□ -1.16
HDAC9-225ENST00000490851 CT45A10P0DMU9 189 aa7.83□□□□□ -1.16
HDAC9-225ENST00000490851 ADMP35318 185 aa7.83□□□□□ -1.16
HDAC9-225ENST00000490851 FAM3BP58499 235 aaPredicted RBP7.83□□□□□ -1.16
HDAC9-225ENST00000490851 RPL23P62829 140 aaKnown RBP7.83□□□□□ -1.16
HDAC9-225ENST00000490851 NF1P21359 2839 aa7.83□□□□□ -1.16
HDAC9-225ENST00000490851 SETD2Q9BYW2 2564 aaPredicted RBP7.83□□□□□ -1.16
HDAC9-225ENST00000490851 TEX48A0A1B0GUV7 120 aa7.82□□□□□ -1.16
HDAC9-225ENST00000490851 A0A1B0GX51 115 aa7.82□□□□□ -1.16
HDAC9-225ENST00000490851 IER3P46695 156 aa7.82□□□□□ -1.16
HDAC9-225ENST00000490851 TPPP2P59282 170 aa7.82□□□□□ -1.16
HDAC9-225ENST00000490851 ZNRF2Q8NHG8 242 aa7.82□□□□□ -1.16
HDAC9-225ENST00000490851 ZNF502Q8TBZ5 544 aa7.82□□□□□ -1.16
HDAC9-225ENST00000490851 CCDC140Q96MF4 163 aa7.82□□□□□ -1.16
HDAC9-225ENST00000490851 TRBV20OR9-2A0A075B6H5 130 aa7.82□□□□□ -1.16
HDAC9-225ENST00000490851 TRBV9A0A0B4J1U6 114 aa7.82□□□□□ -1.16
HDAC9-225ENST00000490851 HOXA3O43365 443 aaPredicted RBP7.82□□□□□ -1.16
HDAC9-225ENST00000490851 IGHG2P01859 326 aa7.82□□□□□ -1.16
HDAC9-225ENST00000490851 SPINK8P0C7L1 97 aa7.82□□□□□ -1.16
HDAC9-225ENST00000490851 GP9P14770 177 aa7.82□□□□□ -1.16
HDAC9-225ENST00000490851 ATP5G2Q06055 141 aa7.82□□□□□ -1.16
HDAC9-225ENST00000490851 PNRC1Q12796 327 aaPredicted RBP7.82□□□□□ -1.16
HDAC9-225ENST00000490851 C12orf54Q6X4T0 127 aa7.82□□□□□ -1.16
HDAC9-225ENST00000490851 FSHBP01225 129 aa7.81□□□□□ -1.16
HDAC9-225ENST00000490851 IGHV3-11P01762 117 aa7.81□□□□□ -1.16
HDAC9-225ENST00000490851 RPS28P62857 69 aaKnown RBP7.81□□□□□ -1.16
HDAC9-225ENST00000490851 GNG5P63218 68 aa7.81□□□□□ -1.16
HDAC9-225ENST00000490851 Q6ZWC4 215 aa7.81□□□□□ -1.16
HDAC9-225ENST00000490851 ZNF329Q86UD4 541 aa7.81□□□□□ -1.16
HDAC9-225ENST00000490851 EEF1AKMT3Q96AZ1 226 aa7.81□□□□□ -1.16
HDAC9-225ENST00000490851 TXNDC17Q9BRA2 123 aa7.81□□□□□ -1.16
HDAC9-225ENST00000490851 TINCRA0A1B0GVN0 87 aa7.81□□□□□ -1.16
HDAC9-225ENST00000490851 WI2-2373I1.2A0A1W2PRP0 233 aa7.81□□□□□ -1.16
HDAC9-225ENST00000490851 J3KT08 172 aa7.81□□□□□ -1.16
HDAC9-225ENST00000490851 NHLRC4P0CG21 123 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-225ENST00000490851 C19orf54Q5BKX5 351 aa7.81□□□□□ -1.16
HDAC9-225ENST00000490851 ACTL10Q5JWF8 245 aa7.81□□□□□ -1.16
HDAC9-225ENST00000490851 LINC00479Q96M42 142 aa7.81□□□□□ -1.16
HDAC9-225ENST00000490851 SHANK2-AS3Q9BTD1 123 aa7.81□□□□□ -1.16
HDAC9-225ENST00000490851 KLK15Q9H2R5 256 aa7.81□□□□□ -1.16
HDAC9-225ENST00000490851 H3BRN7 92 aa7.8□□□□□ -1.16
HDAC9-225ENST00000490851 IGF1P05019 195 aa7.8□□□□□ -1.16
HDAC9-225ENST00000490851 CRYGDP07320 174 aa7.8□□□□□ -1.16
HDAC9-225ENST00000490851 OXLD1Q5BKU9 147 aa7.8□□□□□ -1.16
HDAC9-225ENST00000490851 SGK494Q96LW2 274 aa7.8□□□□□ -1.16
HDAC9-225ENST00000490851 IGHV3OR16-13A0A075B7E8 117 aa7.8□□□□□ -1.16
HDAC9-225ENST00000490851 IGHV3-74A0A0B4J1X5 117 aa7.8□□□□□ -1.16
HDAC9-225ENST00000490851 IGHV3-66A0A0C4DH42 116 aa7.8□□□□□ -1.16
HDAC9-225ENST00000490851 PGPA6NDG6 321 aa7.8□□□□□ -1.16
HDAC9-225ENST00000490851 SLC25A5P05141 298 aaKnown RBP7.8□□□□□ -1.16
HDAC9-225ENST00000490851 RPL15P61313 204 aaKnown RBP7.8□□□□□ -1.16
HDAC9-225ENST00000490851 FAM19A5Q7Z5A7 132 aaPredicted RBP7.8□□□□□ -1.16
HDAC9-225ENST00000490851 C17orf77Q96MU5 243 aa7.8□□□□□ -1.16
HDAC9-225ENST00000490851 IGHV3-49A0A0A0MS15 119 aa7.79□□□□□ -1.16
HDAC9-225ENST00000490851 A6NDN8 102 aa7.79□□□□□ -1.16
HDAC9-225ENST00000490851 TRBV12-3P01733 135 aa7.79□□□□□ -1.16
HDAC9-225ENST00000490851 CENPWQ5EE01 88 aa7.79□□□□□ -1.16
HDAC9-225ENST00000490851 BVES-AS1Q5T3Y7 98 aa7.79□□□□□ -1.16
HDAC9-225ENST00000490851 C10orf99Q6UWK7 81 aa7.79□□□□□ -1.16
HDAC9-225ENST00000490851 Q6YL49 198 aa7.79□□□□□ -1.16
HDAC9-225ENST00000490851 SIGLECL1Q8N7X8 197 aa7.79□□□□□ -1.16
HDAC9-225ENST00000490851 BAALCQ8WXS3 180 aa7.79□□□□□ -1.16
HDAC9-225ENST00000490851 C11orf52Q96A22 123 aa7.79□□□□□ -1.16
HDAC9-225ENST00000490851 JMJD8Q96S16 334 aa7.79□□□□□ -1.16
HDAC9-225ENST00000490851 PRO0628Q9UI54 55 aa7.79□□□□□ -1.16
HDAC9-225ENST00000490851 ARL2-SNX15V9GYD0 113 aa7.79□□□□□ -1.16
HDAC9-225ENST00000490851 FLNBO75369 2602 aaKnown RBP7.79□□□□□ -1.16
HDAC9-225ENST00000490851 TMEM89A2RUT3 159 aa7.79□□□□□ -1.16
HDAC9-225ENST00000490851 RPL7P18124 248 aaKnown RBP7.79□□□□□ -1.16
HDAC9-225ENST00000490851 PPIFP30405 207 aaKnown RBP7.79□□□□□ -1.16
HDAC9-225ENST00000490851 SRP14P37108 136 aaKnown RBP7.79□□□□□ -1.16
HDAC9-225ENST00000490851 CRIP2P52943 208 aaPredicted RBP7.79□□□□□ -1.16
HDAC9-225ENST00000490851 BPIFA4PQ86YQ2 179 aa7.79□□□□□ -1.16
HDAC9-225ENST00000490851 EXOC3-AS1Q8N2X6 119 aa7.79□□□□□ -1.16
HDAC9-225ENST00000490851 Q9H3A6 140 aa7.79□□□□□ -1.16
HDAC9-225ENST00000490851 RABAC1Q9UI14 185 aa7.79□□□□□ -1.16
HDAC9-225ENST00000490851 TRBV7-1A0A0A6YYK4 115 aa7.78□□□□□ -1.16
HDAC9-225ENST00000490851 FAM223BA6NKX1 122 aa7.78□□□□□ -1.16
HDAC9-225ENST00000490851 PEX7O00628 323 aa7.78□□□□□ -1.16
HDAC9-225ENST00000490851 FAM223AQ8IWN6 122 aa7.78□□□□□ -1.16
HDAC9-225ENST00000490851 SYT8Q8NBV8 401 aa7.78□□□□□ -1.16
HDAC9-225ENST00000490851 SAMD10Q9BYL1 202 aa7.78□□□□□ -1.16
HDAC9-225ENST00000490851 MAP1LC3AQ9H492 121 aa7.78□□□□□ -1.16
HDAC9-225ENST00000490851 C7orf71A4D174 169 aa7.78□□□□□ -1.16
HDAC9-225ENST00000490851 BMPR1BO00238 502 aa7.78□□□□□ -1.16
HDAC9-225ENST00000490851 MGST1P10620 155 aaKnown RBP7.78□□□□□ -1.16
HDAC9-225ENST00000490851 ADAMTSL5Q6ZMM2 481 aa7.78□□□□□ -1.16
HDAC9-225ENST00000490851 C9orf139Q6ZV77 190 aa7.78□□□□□ -1.16
HDAC9-225ENST00000490851 Q8N976 141 aa7.78□□□□□ -1.16
HDAC9-225ENST00000490851 ST20Q9HBF5 79 aa7.78□□□□□ -1.16
HDAC9-225ENST00000490851 OTOGQ6ZRI0 2925 aa7.77□□□□□ -1.17
HDAC9-225ENST00000490851 OR2K2Q8NGT1 345 aa7.77□□□□□ -1.17
HDAC9-225ENST00000490851 CMTM2Q8TAZ6 248 aa7.77□□□□□ -1.17
HDAC9-225ENST00000490851 ZNF414Q96IQ9 312 aa7.77□□□□□ -1.17
HDAC9-225ENST00000490851 FOXC2Q99958 501 aa7.77□□□□□ -1.17
HDAC9-225ENST00000490851 ISLRO14498 428 aa7.77□□□□□ -1.17
HDAC9-225ENST00000490851 ZNF415Q09FC8 603 aa7.77□□□□□ -1.17
HDAC9-225ENST00000490851 TM2D2Q9BX73 214 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms