RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 FAM3BP58499 235 aaPredicted RBP10.65□□□□□ -0.7
COL27A1-206ENST00000490831 Q6ZQT7 251 aa10.65□□□□□ -0.7
COL27A1-206ENST00000490831 Q6ZTI0 123 aa10.65□□□□□ -0.7
COL27A1-206ENST00000490831 CMTM2Q8TAZ6 248 aa10.65□□□□□ -0.7
COL27A1-206ENST00000490831 ST6GAL2Q96JF0 529 aa10.65□□□□□ -0.7
COL27A1-206ENST00000490831 HYLS1Q96M11 299 aa10.65□□□□□ -0.7
COL27A1-206ENST00000490831 DNAH2Q9P225 4427 aa10.64□□□□□ -0.71
COL27A1-206ENST00000490831 RGS13O14921 159 aa10.64□□□□□ -0.71
COL27A1-206ENST00000490831 SPINK4O60575 86 aa10.64□□□□□ -0.71
COL27A1-206ENST00000490831 GCHFRP30047 84 aa10.64□□□□□ -0.71
COL27A1-206ENST00000490831 LGALS9BQ3B8N2 356 aa10.64□□□□□ -0.71
COL27A1-206ENST00000490831 ACTR3CQ9C0K3 210 aaPredicted RBP10.64□□□□□ -0.71
COL27A1-206ENST00000490831 NACAE9PAV3 2078 aa10.63□□□□□ -0.71
COL27A1-206ENST00000490831 SERTM2A0A1B0GWG4 89 aa10.63□□□□□ -0.71
COL27A1-206ENST00000490831 H3BNG1 76 aa10.63□□□□□ -0.71
COL27A1-206ENST00000490831 TAAR5O14804 337 aa10.63□□□□□ -0.71
COL27A1-206ENST00000490831 CXorf1O96002 111 aa10.63□□□□□ -0.71
COL27A1-206ENST00000490831 HOXA5P20719 270 aa10.63□□□□□ -0.71
COL27A1-206ENST00000490831 GOLT1AQ6ZVE7 132 aa10.63□□□□□ -0.71
COL27A1-206ENST00000490831 UBE2DNLQ8IWF7 75 aa10.63□□□□□ -0.71
COL27A1-206ENST00000490831 TMEM167BQ9NRX6 74 aa10.63□□□□□ -0.71
COL27A1-206ENST00000490831 TP53TG3Q9ULZ0 132 aa10.63□□□□□ -0.71
COL27A1-206ENST00000490831 KLF12Q9Y4X4 402 aa10.63□□□□□ -0.71
COL27A1-206ENST00000490831 Q6ZR54 194 aa10.62□□□□□ -0.71
COL27A1-206ENST00000490831 SSX7Q7RTT5 188 aa10.62□□□□□ -0.71
COL27A1-206ENST00000490831 C5orf17Q8NAS9 161 aa10.62□□□□□ -0.71
COL27A1-206ENST00000490831 TMPRSS5Q9H3S3 457 aa10.62□□□□□ -0.71
COL27A1-206ENST00000490831 CYTL1Q9NRR1 136 aa10.62□□□□□ -0.71
COL27A1-206ENST00000490831 FAT2Q9NYQ8 4349 aa10.62□□□□□ -0.71
COL27A1-206ENST00000490831 HECTD4Q9Y4D8 3996 aa10.61□□□□□ -0.71
COL27A1-206ENST00000490831 DNAH17Q9UFH2 4485 aa10.61□□□□□ -0.71
COL27A1-206ENST00000490831 ARPC5O15511 151 aa10.61□□□□□ -0.71
COL27A1-206ENST00000490831 GNG5P63218 68 aa10.61□□□□□ -0.71
COL27A1-206ENST00000490831 ZNF726P1Q15940 193 aa10.61□□□□□ -0.71
COL27A1-206ENST00000490831 TDRG1Q3Y452 100 aa10.61□□□□□ -0.71
COL27A1-206ENST00000490831 TVP23CQ96ET8 276 aa10.61□□□□□ -0.71
COL27A1-206ENST00000490831 ARPC5LQ9BPX5 153 aa10.61□□□□□ -0.71
COL27A1-206ENST00000490831 RPH3ALQ9UNE2 315 aa10.61□□□□□ -0.71
COL27A1-206ENST00000490831 MUC4Q99102 2169 aa10.6□□□□□ -0.71
COL27A1-206ENST00000490831 TRAV26-1A0A087WT03 109 aa10.6□□□□□ -0.71
COL27A1-206ENST00000490831 TRGV1A0A0A0MS02 117 aa10.6□□□□□ -0.71
COL27A1-206ENST00000490831 TRAV8-1A0A0A6YYK1 113 aa10.6□□□□□ -0.71
COL27A1-206ENST00000490831 CTXND1A0A1B0GTU2 59 aa10.6□□□□□ -0.71
COL27A1-206ENST00000490831 NUDT3O95989 172 aa10.6□□□□□ -0.71
COL27A1-206ENST00000490831 TCRAP04437 139 aa10.6□□□□□ -0.71
COL27A1-206ENST00000490831 ZNF415Q09FC8 603 aa10.6□□□□□ -0.71
COL27A1-206ENST00000490831 OR5I1Q13606 314 aa10.6□□□□□ -0.71
COL27A1-206ENST00000490831 ZNF345Q14585 488 aa10.6□□□□□ -0.71
COL27A1-206ENST00000490831 LINC00336Q6ZUF6 198 aa10.6□□□□□ -0.71
COL27A1-206ENST00000490831 TRGV2A0A075B6R0 118 aa10.59□□□□□ -0.71
COL27A1-206ENST00000490831 A0A1W2PRE2 83 aa10.59□□□□□ -0.71
COL27A1-206ENST00000490831 GGTLC3B5MD39 225 aa10.59□□□□□ -0.71
COL27A1-206ENST00000490831 SMLR1H3BR10 107 aa10.59□□□□□ -0.71
COL27A1-206ENST00000490831 MUC21Q5SSG8 566 aa10.59□□□□□ -0.71
COL27A1-206ENST00000490831 EPDR1Q9UM22 224 aa10.59□□□□□ -0.71
COL27A1-206ENST00000490831 HMSDA8MTL9 139 aa10.58□□□□□ -0.72
COL27A1-206ENST00000490831 M0R2N4 97 aa10.58□□□□□ -0.72
COL27A1-206ENST00000490831 IGLV2-11P01706 119 aa10.58□□□□□ -0.72
COL27A1-206ENST00000490831 CCL18P55774 89 aa10.58□□□□□ -0.72
COL27A1-206ENST00000490831 SUMO1P63165 101 aaKnown RBP10.58□□□□□ -0.72
COL27A1-206ENST00000490831 FAM159AQ6UWV7 190 aa10.58□□□□□ -0.72
COL27A1-206ENST00000490831 KCNRGQ8N5I3 272 aa10.58□□□□□ -0.72
COL27A1-206ENST00000490831 ZNRF2Q8NHG8 242 aa10.58□□□□□ -0.72
COL27A1-206ENST00000490831 VSIG2Q96IQ7 327 aa10.58□□□□□ -0.72
COL27A1-206ENST00000490831 ATG101Q9BSB4 218 aa10.58□□□□□ -0.72
COL27A1-206ENST00000490831 TREM1Q9NP99 234 aa10.58□□□□□ -0.72
COL27A1-206ENST00000490831 MDFICQ9P1T7 246 aa10.58□□□□□ -0.72
COL27A1-206ENST00000490831 LINC00588Q9Y4M8 146 aa10.58□□□□□ -0.72
COL27A1-206ENST00000490831 IGLV2-18A0A075B6J9 118 aa10.57□□□□□ -0.72
COL27A1-206ENST00000490831 TRGV11A0A075B6L2 103 aa10.57□□□□□ -0.72
COL27A1-206ENST00000490831 TRAV21A0A0B4J279 112 aa10.57□□□□□ -0.72
COL27A1-206ENST00000490831 A0A0J9YY99 117 aa10.57□□□□□ -0.72
COL27A1-206ENST00000490831 FBLL1A6NHQ2 334 aaKnown RBP10.57□□□□□ -0.72
COL27A1-206ENST00000490831 K7EQM0 130 aa10.57□□□□□ -0.72
COL27A1-206ENST00000490831 RTL8CO15255 209 aa10.57□□□□□ -0.72
COL27A1-206ENST00000490831 AKR1C8PQ5T2L2 129 aa10.57□□□□□ -0.72
COL27A1-206ENST00000490831 OR11H4Q8NGC9 324 aa10.57□□□□□ -0.72
COL27A1-206ENST00000490831 RASL10AQ92737 203 aa10.57□□□□□ -0.72
COL27A1-206ENST00000490831 SPXQ9BT56 116 aa10.57□□□□□ -0.72
COL27A1-206ENST00000490831 MRPL16Q9NX20 251 aaKnown RBP10.57□□□□□ -0.72
COL27A1-206ENST00000490831 F6UZH7 168 aa10.56□□□□□ -0.72
COL27A1-206ENST00000490831 TMEM183BQ1AE95 376 aa10.56□□□□□ -0.72
COL27A1-206ENST00000490831 TMEM183AQ8IXX5 376 aa10.56□□□□□ -0.72
COL27A1-206ENST00000490831 CYB561D1Q8N8Q1 229 aa10.56□□□□□ -0.72
COL27A1-206ENST00000490831 TMEM75Q8N9X5 138 aa10.56□□□□□ -0.72
COL27A1-206ENST00000490831 NDFIP1Q9BT67 221 aa10.56□□□□□ -0.72
COL27A1-206ENST00000490831 PSG8Q9UQ74 426 aa10.56□□□□□ -0.72
COL27A1-206ENST00000490831 IGHV3-16A0A0C4DH30 117 aa10.55□□□□□ -0.72
COL27A1-206ENST00000490831 FLI1Q01543 452 aaPredicted RBP10.55□□□□□ -0.72
COL27A1-206ENST00000490831 SGK494Q96LW2 274 aa10.55□□□□□ -0.72
COL27A1-206ENST00000490831 NKX6-2Q9C056 277 aaPredicted RBP10.55□□□□□ -0.72
COL27A1-206ENST00000490831 A0A096LPF7 62 aa10.54□□□□□ -0.72
COL27A1-206ENST00000490831 A0A0D9SG52 128 aa10.54□□□□□ -0.72
COL27A1-206ENST00000490831 A0A1B0GVY2 172 aa10.54□□□□□ -0.72
COL27A1-206ENST00000490831 SLAQ13239 276 aa10.54□□□□□ -0.72
COL27A1-206ENST00000490831 IQCF2Q8IXL9 164 aa10.54□□□□□ -0.72
COL27A1-206ENST00000490831 KCNS1Q96KK3 526 aa10.54□□□□□ -0.72
COL27A1-206ENST00000490831 UPK3BQ9BT76 320 aa10.54□□□□□ -0.72
COL27A1-206ENST00000490831 MAP1LC3B2A6NCE7 125 aa10.53□□□□□ -0.72
COL27A1-206ENST00000490831 FAM74A7A6NL05 159 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms