RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 ABCA13Q86UQ4 5058 aa19.2■□□□□ 0.66
HOXB3-211ENST00000490677 DNAH5Q8TE73 4624 aa19.2■□□□□ 0.66
HOXB3-211ENST00000490677 TRGV2A0A075B6R0 118 aa19.19■□□□□ 0.66
HOXB3-211ENST00000490677 EIF3GO75821 320 aaKnown RBP eCLIP19.19■□□□□ 0.66
HOXB3-211ENST00000490677 PET100P0DJ07 73 aa19.19■□□□□ 0.66
HOXB3-211ENST00000490677 DEFA1P59665 94 aa19.19■□□□□ 0.66
HOXB3-211ENST00000490677 DEFA3P59666 94 aa19.19■□□□□ 0.66
HOXB3-211ENST00000490677 MRPS16Q9Y3D3 137 aaKnown RBP19.19■□□□□ 0.66
HOXB3-211ENST00000490677 UBE2L3P68036 154 aaKnown RBP19.18■□□□□ 0.66
HOXB3-211ENST00000490677 RGS13O14921 159 aa19.17■□□□□ 0.66
HOXB3-211ENST00000490677 ZNF266Q14584 549 aa19.17■□□□□ 0.66
HOXB3-211ENST00000490677 APOBP04114 4563 aaKnown RBP19.17■□□□□ 0.66
HOXB3-211ENST00000490677 DIRC3C9JPN6 131 aa19.16■□□□□ 0.66
HOXB3-211ENST00000490677 KHDC3LQ587J8 217 aa19.16■□□□□ 0.66
HOXB3-211ENST00000490677 ST6GAL2Q96JF0 529 aa19.16■□□□□ 0.66
HOXB3-211ENST00000490677 IFNA5P01569 189 aa19.15■□□□□ 0.66
HOXB3-211ENST00000490677 SCGB1C1Q8TD33 95 aa19.15■□□□□ 0.66
HOXB3-211ENST00000490677 MRPL16Q9NX20 251 aaKnown RBP19.15■□□□□ 0.66
HOXB3-211ENST00000490677 CSN1S1P47710 185 aa19.14■□□□□ 0.65
HOXB3-211ENST00000490677 Q6AWC8 147 aa19.13■□□□□ 0.65
HOXB3-211ENST00000490677 TAS2R45P59539 299 aa19.12■□□□□ 0.65
HOXB3-211ENST00000490677 MDFICQ9P1T7 246 aa19.12■□□□□ 0.65
HOXB3-211ENST00000490677 LENEPQ9Y5L5 61 aa19.12■□□□□ 0.65
HOXB3-211ENST00000490677 ALG5Q9Y673 324 aa19.12■□□□□ 0.65
HOXB3-211ENST00000490677 TTC32Q5I0X7 151 aa19.11■□□□□ 0.65
HOXB3-211ENST00000490677 MUC21Q5SSG8 566 aa19.11■□□□□ 0.65
HOXB3-211ENST00000490677 TMED6Q8WW62 240 aa19.11■□□□□ 0.65
HOXB3-211ENST00000490677 ARPC5LQ9BPX5 153 aa19.11■□□□□ 0.65
HOXB3-211ENST00000490677 OTORQ9NRC9 128 aa19.11■□□□□ 0.65
HOXB3-211ENST00000490677 A0A1W2PPQ1 181 aa19.1■□□□□ 0.65
HOXB3-211ENST00000490677 IGHV3-53P01767 116 aa19.1■□□□□ 0.65
HOXB3-211ENST00000490677 RAB2AP61019 212 aa19.1■□□□□ 0.65
HOXB3-211ENST00000490677 FHL2Q14192 279 aa19.1■□□□□ 0.65
HOXB3-211ENST00000490677 ZNF415Q09FC8 603 aa19.09■□□□□ 0.65
HOXB3-211ENST00000490677 CRYBA4P53673 196 aa19.08■□□□□ 0.64
HOXB3-211ENST00000490677 ACOT6Q3I5F7 207 aaPredicted RBP19.08■□□□□ 0.64
HOXB3-211ENST00000490677 HYLS1Q96M11 299 aa19.08■□□□□ 0.64
HOXB3-211ENST00000490677 PGPA6NDG6 321 aa19.07■□□□□ 0.64
HOXB3-211ENST00000490677 PAX4O43316 350 aa19.07■□□□□ 0.64
HOXB3-211ENST00000490677 PQLC2Q6ZP29 291 aa19.07■□□□□ 0.64
HOXB3-211ENST00000490677 TVP23CQ96ET8 276 aa19.07■□□□□ 0.64
HOXB3-211ENST00000490677 KRTAP4-5Q9BYR2 181 aa19.07■□□□□ 0.64
HOXB3-211ENST00000490677 PRO0255Q9UI72 69 aa19.07■□□□□ 0.64
HOXB3-211ENST00000490677 C16orf90A8MZG2 172 aa19.06■□□□□ 0.64
HOXB3-211ENST00000490677 TDRG1Q3Y452 100 aa19.06■□□□□ 0.64
HOXB3-211ENST00000490677 ARL6IP6Q8N6S5 226 aa19.06■□□□□ 0.64
HOXB3-211ENST00000490677 BATF3Q9NR55 127 aa19.06■□□□□ 0.64
HOXB3-211ENST00000490677 RASL10AQ92737 203 aa19.05■□□□□ 0.64
HOXB3-211ENST00000490677 ICOSQ9Y6W8 199 aa19.05■□□□□ 0.64
HOXB3-211ENST00000490677 HMGB3O15347 200 aaKnown RBP19.04■□□□□ 0.64
HOXB3-211ENST00000490677 TMEM183BQ1AE95 376 aa19.04■□□□□ 0.64
HOXB3-211ENST00000490677 Q6ZRN7 208 aaPredicted RBP19.04■□□□□ 0.64
HOXB3-211ENST00000490677 TMEM183AQ8IXX5 376 aa19.04■□□□□ 0.64
HOXB3-211ENST00000490677 C8orf49Q96NF6 230 aa19.04■□□□□ 0.64
HOXB3-211ENST00000490677 HHLA3Q9XRX5 114 aa19.04■□□□□ 0.64
HOXB3-211ENST00000490677 TRAV8-1A0A0A6YYK1 113 aa19.03■□□□□ 0.64
HOXB3-211ENST00000490677 A0A1W2PPV4 95 aa19.03■□□□□ 0.64
HOXB3-211ENST00000490677 BTF3P20290 206 aaKnown RBP19.03■□□□□ 0.64
HOXB3-211ENST00000490677 GOLT1AQ6ZVE7 132 aa19.03■□□□□ 0.64
HOXB3-211ENST00000490677 IQCF2Q8IXL9 164 aa19.03■□□□□ 0.64
HOXB3-211ENST00000490677 OR10G4Q8NGN3 311 aa19.03■□□□□ 0.64
HOXB3-211ENST00000490677 OR10G9Q8NGN4 311 aa19.03■□□□□ 0.64
HOXB3-211ENST00000490677 OR10G7Q8NGN6 311 aa19.03■□□□□ 0.64
HOXB3-211ENST00000490677 OR2G3Q8NGZ4 309 aa19.03■□□□□ 0.64
HOXB3-211ENST00000490677 ZNF479Q96JC4 524 aa19.03■□□□□ 0.64
HOXB3-211ENST00000490677 SFTA3P0C7M3 94 aa19.02■□□□□ 0.64
HOXB3-211ENST00000490677 GNG5P63218 68 aa19.02■□□□□ 0.64
HOXB3-211ENST00000490677 SUN5Q8TC36 379 aa19.02■□□□□ 0.64
HOXB3-211ENST00000490677 AQP10Q96PS8 301 aa19.02■□□□□ 0.64
HOXB3-211ENST00000490677 RPH3ALQ9UNE2 315 aa19.02■□□□□ 0.64
HOXB3-211ENST00000490677 STAG3L2P0CL84 134 aa19.01■□□□□ 0.63
HOXB3-211ENST00000490677 STAG3L3P0CL85 134 aa19.01■□□□□ 0.63
HOXB3-211ENST00000490677 ARL14EPLP0DKL9 152 aa19.01■□□□□ 0.63
HOXB3-211ENST00000490677 SLAQ13239 276 aa19.01■□□□□ 0.63
HOXB3-211ENST00000490677 Q5BKY6 102 aa19.01■□□□□ 0.63
HOXB3-211ENST00000490677 FAM159AQ6UWV7 190 aa19.01■□□□□ 0.63
HOXB3-211ENST00000490677 CMTM2Q8TAZ6 248 aa19.01■□□□□ 0.63
HOXB3-211ENST00000490677 SPXQ9BT56 116 aa19.01■□□□□ 0.63
HOXB3-211ENST00000490677 TRGV11A0A075B6L2 103 aa19■□□□□ 0.63
HOXB3-211ENST00000490677 SIVA1O15304 175 aa19■□□□□ 0.63
HOXB3-211ENST00000490677 NXPH4O95158 308 aa19■□□□□ 0.63
HOXB3-211ENST00000490677 PTTG1O95997 202 aa19■□□□□ 0.63
HOXB3-211ENST00000490677 LINC00315P59091 139 aa19■□□□□ 0.63
HOXB3-211ENST00000490677 LYPD5Q6UWN5 251 aa19■□□□□ 0.63
HOXB3-211ENST00000490677 SPATA12Q7Z6I5 190 aa19■□□□□ 0.63
HOXB3-211ENST00000490677 IGHV3-16A0A0C4DH30 117 aa18.99■□□□□ 0.63
HOXB3-211ENST00000490677 GNRH2O43555 120 aa18.99■□□□□ 0.63
HOXB3-211ENST00000490677 CDK2AP2O75956 126 aa18.99■□□□□ 0.63
HOXB3-211ENST00000490677 KRTAP10-2P60368 255 aa18.99■□□□□ 0.63
HOXB3-211ENST00000490677 FAM74A1Q5RGS3 127 aa18.99■□□□□ 0.63
HOXB3-211ENST00000490677 HSD17B11Q8NBQ5 300 aa18.99■□□□□ 0.63
HOXB3-211ENST00000490677 PSMG3Q9BT73 122 aaPredicted RBP18.99■□□□□ 0.63
HOXB3-211ENST00000490677 F6UZH7 168 aa18.98■□□□□ 0.63
HOXB3-211ENST00000490677 ATP6V0CP27449 155 aa18.98■□□□□ 0.63
HOXB3-211ENST00000490677 CDC34P49427 236 aaPredicted RBP18.98■□□□□ 0.63
HOXB3-211ENST00000490677 MRPL23Q16540 153 aaKnown RBP18.98■□□□□ 0.63
HOXB3-211ENST00000490677 TYMSP04818 313 aa18.97■□□□□ 0.63
HOXB3-211ENST00000490677 RAB24Q969Q5 203 aa18.97■□□□□ 0.63
HOXB3-211ENST00000490677 NAGKQ9UJ70 344 aa18.97■□□□□ 0.63
HOXB3-211ENST00000490677 TRGV4A0A0C4DH28 118 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms