RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 PAGE4O60829 102 aa10.29□□□□□ -0.76
SRGAP3-208ENST00000490348 GPX1P07203 203 aa10.29□□□□□ -0.76
SRGAP3-208ENST00000490348 HTN1P15515 57 aa10.29□□□□□ -0.76
SRGAP3-208ENST00000490348 ATP5G3P48201 142 aa10.29□□□□□ -0.76
SRGAP3-208ENST00000490348 PMS2P11Q13670 270 aa10.29□□□□□ -0.76
SRGAP3-208ENST00000490348 ALKAL2Q6UX46 152 aa10.29□□□□□ -0.76
SRGAP3-208ENST00000490348 LENEPQ9Y5L5 61 aa10.29□□□□□ -0.76
SRGAP3-208ENST00000490348 SERTM2A0A1B0GWG4 89 aa10.28□□□□□ -0.76
SRGAP3-208ENST00000490348 CYB561D1Q8N8Q1 229 aa10.28□□□□□ -0.76
SRGAP3-208ENST00000490348 RNASE8Q8TDE3 154 aaKnown RBP10.28□□□□□ -0.76
SRGAP3-208ENST00000490348 NKX6-2Q9C056 277 aaPredicted RBP10.28□□□□□ -0.76
SRGAP3-208ENST00000490348 ARL2-SNX15V9GYD0 113 aa10.28□□□□□ -0.76
SRGAP3-208ENST00000490348 TRAV34A0A0B4J273 112 aa10.27□□□□□ -0.76
SRGAP3-208ENST00000490348 TMEM189A5PLL7 270 aa10.27□□□□□ -0.76
SRGAP3-208ENST00000490348 PEX7O00628 323 aa10.27□□□□□ -0.76
SRGAP3-208ENST00000490348 IFNA7P01567 189 aa10.27□□□□□ -0.76
SRGAP3-208ENST00000490348 C12orf74Q32Q52 190 aa10.27□□□□□ -0.76
SRGAP3-208ENST00000490348 CST9LP1Q5W188 147 aa10.27□□□□□ -0.76
SRGAP3-208ENST00000490348 TMEM75Q8N9X5 138 aa10.27□□□□□ -0.76
SRGAP3-208ENST00000490348 NIPSNAP3BQ9BS92 247 aa10.27□□□□□ -0.76
SRGAP3-208ENST00000490348 DKK2Q9UBU2 259 aa10.27□□□□□ -0.76
SRGAP3-208ENST00000490348 RYR3Q15413 4870 aa10.27□□□□□ -0.76
SRGAP3-208ENST00000490348 CXorf65A6NEN9 183 aa10.26□□□□□ -0.77
SRGAP3-208ENST00000490348 F6UZH7 168 aa10.26□□□□□ -0.77
SRGAP3-208ENST00000490348 FAM222AQ5U5X8 452 aa10.26□□□□□ -0.77
SRGAP3-208ENST00000490348 PYGO2Q9BRQ0 406 aa10.26□□□□□ -0.77
SRGAP3-208ENST00000490348 PSG8Q9UQ74 426 aa10.26□□□□□ -0.77
SRGAP3-208ENST00000490348 DNAH1Q9P2D7 4330 aa10.26□□□□□ -0.77
SRGAP3-208ENST00000490348 FLI1Q01543 452 aaPredicted RBP10.26□□□□□ -0.77
SRGAP3-208ENST00000490348 Q6AWC8 147 aa10.26□□□□□ -0.77
SRGAP3-208ENST00000490348 Q6ZTC4 211 aa10.26□□□□□ -0.77
SRGAP3-208ENST00000490348 TMEM263Q8WUH6 116 aaKnown RBP10.26□□□□□ -0.77
SRGAP3-208ENST00000490348 HIST1H2BAQ96A08 127 aa10.26□□□□□ -0.77
SRGAP3-208ENST00000490348 C8orf49Q96NF6 230 aa10.26□□□□□ -0.77
SRGAP3-208ENST00000490348 TREM1Q9NP99 234 aa10.26□□□□□ -0.77
SRGAP3-208ENST00000490348 K7EQM0 130 aa10.25□□□□□ -0.77
SRGAP3-208ENST00000490348 ZNF80P51504 273 aaPredicted RBP10.25□□□□□ -0.77
SRGAP3-208ENST00000490348 PRNTQ86SH4 94 aa10.25□□□□□ -0.77
SRGAP3-208ENST00000490348 PHLDA1Q8WV24 401 aaPredicted RBP10.25□□□□□ -0.77
SRGAP3-208ENST00000490348 C16orf74Q96GX8 76 aa10.25□□□□□ -0.77
SRGAP3-208ENST00000490348 LINC00467Q9BRT7 94 aa10.25□□□□□ -0.77
SRGAP3-208ENST00000490348 GNG13Q9P2W3 67 aa10.25□□□□□ -0.77
SRGAP3-208ENST00000490348 TP53TG3Q9ULZ0 132 aa10.25□□□□□ -0.77
SRGAP3-208ENST00000490348 SPART-AS1P0CW21 52 aa10.24□□□□□ -0.77
SRGAP3-208ENST00000490348 C11orf72Q8NBR9 251 aa10.24□□□□□ -0.77
SRGAP3-208ENST00000490348 TCEAL7Q9BRU2 100 aa10.24□□□□□ -0.77
SRGAP3-208ENST00000490348 KLF12Q9Y4X4 402 aa10.24□□□□□ -0.77
SRGAP3-208ENST00000490348 RYR2Q92736 4967 aa10.24□□□□□ -0.77
SRGAP3-208ENST00000490348 ALMS1Q8TCU4 4167 aa10.23□□□□□ -0.77
SRGAP3-208ENST00000490348 SCO2A0A1W2PP80 73 aa10.23□□□□□ -0.77
SRGAP3-208ENST00000490348 C11orf94C9JXX5 98 aa10.23□□□□□ -0.77
SRGAP3-208ENST00000490348 PPT1P50897 306 aa10.23□□□□□ -0.77
SRGAP3-208ENST00000490348 CEMP1Q6PRD7 247 aaPredicted RBP10.23□□□□□ -0.77
SRGAP3-208ENST00000490348 ZNF493Q6ZR52 646 aa10.23□□□□□ -0.77
SRGAP3-208ENST00000490348 Q86TA4 180 aa10.23□□□□□ -0.77
SRGAP3-208ENST00000490348 HYDINQ4G0P3 5121 aa10.22□□□□□ -0.77
SRGAP3-208ENST00000490348 IGHV1OR15-1A0A075B7D0 117 aa10.22□□□□□ -0.77
SRGAP3-208ENST00000490348 ANXA2RQ3ZCQ2 193 aa10.22□□□□□ -0.77
SRGAP3-208ENST00000490348 MUC21Q5SSG8 566 aa10.22□□□□□ -0.77
SRGAP3-208ENST00000490348 EIF4E3Q8N5X7 224 aaKnown RBP10.22□□□□□ -0.77
SRGAP3-208ENST00000490348 C2CD4CQ8TF44 421 aa10.22□□□□□ -0.77
SRGAP3-208ENST00000490348 NOP10Q9NPE3 64 aaKnown RBP10.22□□□□□ -0.77
SRGAP3-208ENST00000490348 MANBALQ9NQG1 85 aa10.22□□□□□ -0.77
SRGAP3-208ENST00000490348 FBLL1A6NHQ2 334 aaKnown RBP10.22□□□□□ -0.77
SRGAP3-208ENST00000490348 CBY3A6NI87 242 aa10.22□□□□□ -0.77
SRGAP3-208ENST00000490348 LYPD6BQ8NI32 183 aa10.22□□□□□ -0.77
SRGAP3-208ENST00000490348 NDFIP1Q9BT67 221 aa10.22□□□□□ -0.77
SRGAP3-208ENST00000490348 GSN-AS1Q9NRJ2 163 aa10.22□□□□□ -0.77
SRGAP3-208ENST00000490348 C11orf21Q9P2W6 132 aa10.22□□□□□ -0.77
SRGAP3-208ENST00000490348 TIMM8BQ9Y5J9 83 aaPredicted RBP10.22□□□□□ -0.77
SRGAP3-208ENST00000490348 KMT2AQ03164 3969 aa10.22□□□□□ -0.77
SRGAP3-208ENST00000490348 NUPR2A6NF83 97 aa10.21□□□□□ -0.78
SRGAP3-208ENST00000490348 LYRM9A8MSI8 78 aa10.21□□□□□ -0.78
SRGAP3-208ENST00000490348 FMC1Q96HJ9 113 aa10.21□□□□□ -0.78
SRGAP3-208ENST00000490348 TRAV21A0A0B4J279 112 aa10.2□□□□□ -0.78
SRGAP3-208ENST00000490348 TRBV6-1A0A0K0K1D8 114 aa10.2□□□□□ -0.78
SRGAP3-208ENST00000490348 TEX48A0A1B0GUV7 120 aa10.2□□□□□ -0.78
SRGAP3-208ENST00000490348 LINC00862A6NCI5 91 aa10.2□□□□□ -0.78
SRGAP3-208ENST00000490348 TEX46H3BTG2 121 aa10.2□□□□□ -0.78
SRGAP3-208ENST00000490348 GCGP01275 180 aa10.2□□□□□ -0.78
SRGAP3-208ENST00000490348 LTAP01374 205 aa10.2□□□□□ -0.78
SRGAP3-208ENST00000490348 BCL2P10415 239 aa10.2□□□□□ -0.78
SRGAP3-208ENST00000490348 TMEM183BQ1AE95 376 aa10.2□□□□□ -0.78
SRGAP3-208ENST00000490348 TDRG1Q3Y452 100 aa10.2□□□□□ -0.78
SRGAP3-208ENST00000490348 SAPCD1Q5SSQ6 148 aa10.2□□□□□ -0.78
SRGAP3-208ENST00000490348 TEX261Q6UWH6 196 aa10.2□□□□□ -0.78
SRGAP3-208ENST00000490348 VPS13DQ5THJ4 4388 aa10.19□□□□□ -0.78
SRGAP3-208ENST00000490348 PFN1P07737 140 aaKnown RBP10.19□□□□□ -0.78
SRGAP3-208ENST00000490348 DEFB130BP0DP73 79 aa10.19□□□□□ -0.78
SRGAP3-208ENST00000490348 DEFB130AP0DP74 79 aa10.19□□□□□ -0.78
SRGAP3-208ENST00000490348 AKR1C3P42330 323 aa10.19□□□□□ -0.78
SRGAP3-208ENST00000490348 CRIP1P50238 77 aa10.19□□□□□ -0.78
SRGAP3-208ENST00000490348 DAZ2Q13117 558 aaKnown RBP10.19□□□□□ -0.78
SRGAP3-208ENST00000490348 SMUG1Q53HV7 270 aa10.19□□□□□ -0.78
SRGAP3-208ENST00000490348 COX8CQ7Z4L0 72 aa10.19□□□□□ -0.78
SRGAP3-208ENST00000490348 ZNF680Q8NEM1 530 aa10.19□□□□□ -0.78
SRGAP3-208ENST00000490348 C11orf52Q96A22 123 aa10.19□□□□□ -0.78
SRGAP3-208ENST00000490348 ZC2HC1AQ96GY0 325 aa10.19□□□□□ -0.78
SRGAP3-208ENST00000490348 DERL1Q9BUN8 251 aa10.19□□□□□ -0.78
SRGAP3-208ENST00000490348 MDFICQ9P1T7 246 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms