RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 DNAJC4Q9NNZ3 241 aa5.48□□□□□ -1.53
USP39-216ENST00000490193 MRPL16Q9NX20 251 aaKnown RBP5.48□□□□□ -1.53
USP39-216ENST00000490193 TP53TG3Q9ULZ0 132 aa5.48□□□□□ -1.53
USP39-216ENST00000490193 FAT3Q8TDW7 4589 aa5.47□□□□□ -1.53
USP39-216ENST00000490193 TRBV19A0A075B6N1 114 aa5.47□□□□□ -1.53
USP39-216ENST00000490193 IGHV1OR15-1A0A075B7D0 117 aa5.47□□□□□ -1.53
USP39-216ENST00000490193 C9orf170A2RU37 121 aa5.47□□□□□ -1.53
USP39-216ENST00000490193 FABP12A6NFH5 140 aa5.47□□□□□ -1.53
USP39-216ENST00000490193 PSCAO43653 123 aa5.47□□□□□ -1.53
USP39-216ENST00000490193 TNFSF8P32971 234 aa5.47□□□□□ -1.53
USP39-216ENST00000490193 TIRAPP58753 221 aa5.47□□□□□ -1.53
USP39-216ENST00000490193 ERCC8Q13216 396 aa5.47□□□□□ -1.53
USP39-216ENST00000490193 PDE6HQ13956 83 aa5.47□□□□□ -1.53
USP39-216ENST00000490193 WDR73Q6P4I2 378 aa5.47□□□□□ -1.53
USP39-216ENST00000490193 TOMM5Q8N4H5 51 aa5.47□□□□□ -1.53
USP39-216ENST00000490193 MCFD2Q8NI22 146 aa5.47□□□□□ -1.53
USP39-216ENST00000490193 TXNDC17Q9BRA2 123 aa5.47□□□□□ -1.53
USP39-216ENST00000490193 SLIRPQ9GZT3 109 aaKnown RBP5.47□□□□□ -1.53
USP39-216ENST00000490193 TRAV5A0A0B4J249 113 aa5.46□□□□□ -1.54
USP39-216ENST00000490193 TRGV4A0A0C4DH28 118 aa5.46□□□□□ -1.54
USP39-216ENST00000490193 IGHV3-38A0A0C4DH36 116 aa5.46□□□□□ -1.54
USP39-216ENST00000490193 TRBV7-9A0A0J9YWB2 115 aa5.46□□□□□ -1.54
USP39-216ENST00000490193 IBA57-AS1B1ANH7 110 aa5.46□□□□□ -1.54
USP39-216ENST00000490193 E5RGE8 158 aa5.46□□□□□ -1.54
USP39-216ENST00000490193 RGS13O14921 159 aa5.46□□□□□ -1.54
USP39-216ENST00000490193 NDUFB4O95168 129 aa5.46□□□□□ -1.54
USP39-216ENST00000490193 GPX1P07203 203 aa5.46□□□□□ -1.54
USP39-216ENST00000490193 GYPEP15421 78 aa5.46□□□□□ -1.54
USP39-216ENST00000490193 RNASE4P34096 147 aaKnown RBP5.46□□□□□ -1.54
USP39-216ENST00000490193 CAMLGP49069 296 aa5.46□□□□□ -1.54
USP39-216ENST00000490193 LINC01556Q5JQF7 62 aa5.46□□□□□ -1.54
USP39-216ENST00000490193 PRR9Q5T870 116 aa5.46□□□□□ -1.54
USP39-216ENST00000490193 Q6ZRG5 221 aa5.46□□□□□ -1.54
USP39-216ENST00000490193 SH2D6Q7Z4S9 175 aa5.46□□□□□ -1.54
USP39-216ENST00000490193 OR1L4Q8NGR5 311 aa5.46□□□□□ -1.54
USP39-216ENST00000490193 PCNPQ8WW12 178 aaKnown RBP5.46□□□□□ -1.54
USP39-216ENST00000490193 RASL10AQ92737 203 aa5.46□□□□□ -1.54
USP39-216ENST00000490193 ZNF479Q96JC4 524 aa5.46□□□□□ -1.54
USP39-216ENST00000490193 PFDN5Q99471 154 aa5.46□□□□□ -1.54
USP39-216ENST00000490193 BCL7BQ9BQE9 202 aa5.46□□□□□ -1.54
USP39-216ENST00000490193 TMEM14CQ9P0S9 112 aa5.46□□□□□ -1.54
USP39-216ENST00000490193 RCL1Q9Y2P8 373 aaKnown RBP5.46□□□□□ -1.54
USP39-216ENST00000490193 CHTOPQ9Y3Y2 248 aaKnown RBP5.46□□□□□ -1.54
USP39-216ENST00000490193 C7orf66A4D0T2 115 aa5.45□□□□□ -1.54
USP39-216ENST00000490193 C9JCJ5 164 aa5.45□□□□□ -1.54
USP39-216ENST00000490193 OXTP01178 125 aa5.45□□□□□ -1.54
USP39-216ENST00000490193 HIST1H1EP10412 219 aaKnown RBP5.45□□□□□ -1.54
USP39-216ENST00000490193 KRTAP10-4P60372 401 aaPredicted RBP5.45□□□□□ -1.54
USP39-216ENST00000490193 RAB31Q13636 194 aa5.45□□□□□ -1.54
USP39-216ENST00000490193 TMEM78Q5T7P6 136 aa5.45□□□□□ -1.54
USP39-216ENST00000490193 Q6ZQT7 251 aa5.45□□□□□ -1.54
USP39-216ENST00000490193 NRARPQ7Z6K4 114 aa5.45□□□□□ -1.54
USP39-216ENST00000490193 C12orf45Q8N5I9 185 aaPredicted RBP5.45□□□□□ -1.54
USP39-216ENST00000490193 RAB2BQ8WUD1 216 aa5.45□□□□□ -1.54
USP39-216ENST00000490193 SPXQ9BT56 116 aa5.45□□□□□ -1.54
USP39-216ENST00000490193 SRRQ9GZT4 340 aa5.45□□□□□ -1.54
USP39-216ENST00000490193 ZNF492Q9P255 531 aa5.45□□□□□ -1.54
USP39-216ENST00000490193 WDR83OSQ9Y284 106 aa5.45□□□□□ -1.54
USP39-216ENST00000490193 SFTA3P0C7M3 94 aa5.44□□□□□ -1.54
USP39-216ENST00000490193 RPL29P47914 159 aaKnown RBP5.44□□□□□ -1.54
USP39-216ENST00000490193 TMBIM6P55061 237 aa5.44□□□□□ -1.54
USP39-216ENST00000490193 IAH1Q2TAA2 248 aaPredicted RBP5.44□□□□□ -1.54
USP39-216ENST00000490193 VWC2Q2TAL6 325 aa5.44□□□□□ -1.54
USP39-216ENST00000490193 MIC13Q5XKP0 118 aa5.44□□□□□ -1.54
USP39-216ENST00000490193 ANAPC16Q96DE5 110 aa5.44□□□□□ -1.54
USP39-216ENST00000490193 MRPS26Q9BYN8 205 aaKnown RBP5.44□□□□□ -1.54
USP39-216ENST00000490193 KRTAP9-8Q9BYQ0 159 aa5.44□□□□□ -1.54
USP39-216ENST00000490193 V9GYH0 126 aa5.44□□□□□ -1.54
USP39-216ENST00000490193 IGKV2-40A0A087WW87 121 aaPredicted RBP5.43□□□□□ -1.54
USP39-216ENST00000490193 TRAV4A0A0B4J268 109 aa5.43□□□□□ -1.54
USP39-216ENST00000490193 A6NHS1 94 aa5.43□□□□□ -1.54
USP39-216ENST00000490193 NDUFB6O95139 128 aa5.43□□□□□ -1.54
USP39-216ENST00000490193 IGKV2D-40P01614 121 aaPredicted RBP5.43□□□□□ -1.54
USP39-216ENST00000490193 MBPP02686 304 aaPredicted RBP5.43□□□□□ -1.54
USP39-216ENST00000490193 ZNF138P52744 262 aa5.43□□□□□ -1.54
USP39-216ENST00000490193 ZNF266Q14584 549 aa5.43□□□□□ -1.54
USP39-216ENST00000490193 LAGE3Q14657 143 aa5.43□□□□□ -1.54
USP39-216ENST00000490193 TDRG1Q3Y452 100 aa5.43□□□□□ -1.54
USP39-216ENST00000490193 PYDC2Q56P42 97 aa5.43□□□□□ -1.54
USP39-216ENST00000490193 EXOC3-AS1Q8N2X6 119 aa5.43□□□□□ -1.54
USP39-216ENST00000490193 BLNKQ8WV28 456 aa5.43□□□□□ -1.54
USP39-216ENST00000490193 SLC25A31Q9H0C2 315 aa5.43□□□□□ -1.54
USP39-216ENST00000490193 AAMDCQ9H7C9 122 aa5.43□□□□□ -1.54
USP39-216ENST00000490193 SLC39A9Q9NUM3 307 aa5.43□□□□□ -1.54
USP39-216ENST00000490193 UQCC1Q9NVA1 299 aa5.43□□□□□ -1.54
USP39-216ENST00000490193 PLA2G2DQ9UNK4 145 aa5.43□□□□□ -1.54
USP39-216ENST00000490193 TIMM9Q9Y5J7 89 aa5.43□□□□□ -1.54
USP39-216ENST00000490193 S100A9P06702 114 aaKnown RBP5.42□□□□□ -1.54
USP39-216ENST00000490193 PYYP10082 97 aa5.42□□□□□ -1.54
USP39-216ENST00000490193 WFDC2Q14508 124 aa5.42□□□□□ -1.54
USP39-216ENST00000490193 ZNF846Q147U1 533 aa5.42□□□□□ -1.54
USP39-216ENST00000490193 Q6AWC8 147 aa5.42□□□□□ -1.54
USP39-216ENST00000490193 TM2D2Q9BX73 214 aa5.42□□□□□ -1.54
USP39-216ENST00000490193 C20orf85Q9H1P6 137 aa5.42□□□□□ -1.54
USP39-216ENST00000490193 C11orf1Q9H5F2 150 aa5.42□□□□□ -1.54
USP39-216ENST00000490193 Q9HAA7 133 aa5.42□□□□□ -1.54
USP39-216ENST00000490193 PKHD1L1Q86WI1 4243 aa5.41□□□□□ -1.54
USP39-216ENST00000490193 TRGV11A0A075B6L2 103 aa5.41□□□□□ -1.54
USP39-216ENST00000490193 TRAV8-6A0A0B4J262 113 aa5.41□□□□□ -1.54
USP39-216ENST00000490193 LOC100131303A0A0U1RQF7 123 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms