RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 MRPL16Q9NX20 251 aaKnown RBP13.32□□□□□ -0.28
TNFRSF1B-202ENST00000489921 HSPB11Q9Y547 144 aa13.32□□□□□ -0.28
TNFRSF1B-202ENST00000489921 RBAKDNA6NC62 111 aa13.31□□□□□ -0.28
TNFRSF1B-202ENST00000489921 C17orf112F2Z3M2 114 aa13.31□□□□□ -0.28
TNFRSF1B-202ENST00000489921 MPC2O95563 127 aa13.31□□□□□ -0.28
TNFRSF1B-202ENST00000489921 KRTAP10-2P60368 255 aa13.31□□□□□ -0.28
TNFRSF1B-202ENST00000489921 SPATA12Q7Z6I5 190 aa13.31□□□□□ -0.28
TNFRSF1B-202ENST00000489921 LYPD1Q8N2G4 141 aa13.31□□□□□ -0.28
TNFRSF1B-202ENST00000489921 OR7C2O60412 319 aa13.3□□□□□ -0.28
TNFRSF1B-202ENST00000489921 EIF3GO75821 320 aaKnown RBP eCLIP13.3□□□□□ -0.28
TNFRSF1B-202ENST00000489921 IGHV3-53P01767 116 aa13.3□□□□□ -0.28
TNFRSF1B-202ENST00000489921 BTF3P20290 206 aaKnown RBP13.3□□□□□ -0.28
TNFRSF1B-202ENST00000489921 FHL2Q14192 279 aa13.3□□□□□ -0.28
TNFRSF1B-202ENST00000489921 ZNF266Q14584 549 aa13.3□□□□□ -0.28
TNFRSF1B-202ENST00000489921 FFAR4Q5NUL3 377 aa13.3□□□□□ -0.28
TNFRSF1B-202ENST00000489921 Q6ZRN7 208 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF1B-202ENST00000489921 MDFICQ9P1T7 246 aa13.3□□□□□ -0.28
TNFRSF1B-202ENST00000489921 PAX4O43316 350 aa13.29□□□□□ -0.28
TNFRSF1B-202ENST00000489921 CRYBA4P53673 196 aa13.29□□□□□ -0.28
TNFRSF1B-202ENST00000489921 WFDC1Q9HC57 220 aa13.29□□□□□ -0.28
TNFRSF1B-202ENST00000489921 PTTG2Q9NZH5 202 aa13.29□□□□□ -0.28
TNFRSF1B-202ENST00000489921 DIRC3C9JPN6 131 aa13.28□□□□□ -0.28
TNFRSF1B-202ENST00000489921 RPL12P30050 165 aaKnown RBP13.28□□□□□ -0.28
TNFRSF1B-202ENST00000489921 UBE2L3P68036 154 aaKnown RBP13.28□□□□□ -0.28
TNFRSF1B-202ENST00000489921 MUC21Q5SSG8 566 aa13.28□□□□□ -0.28
TNFRSF1B-202ENST00000489921 Q6AWC8 147 aa13.28□□□□□ -0.28
TNFRSF1B-202ENST00000489921 SMIM3Q9BZL3 60 aa13.28□□□□□ -0.28
TNFRSF1B-202ENST00000489921 PRO0255Q9UI72 69 aa13.28□□□□□ -0.28
TNFRSF1B-202ENST00000489921 LINC00315P59091 139 aa13.27□□□□□ -0.29
TNFRSF1B-202ENST00000489921 ARPC5LQ9BPX5 153 aa13.27□□□□□ -0.29
TNFRSF1B-202ENST00000489921 HHLA3Q9XRX5 114 aa13.27□□□□□ -0.29
TNFRSF1B-202ENST00000489921 ICOSQ9Y6W8 199 aa13.27□□□□□ -0.29
TNFRSF1B-202ENST00000489921 SIVA1O15304 175 aa13.26□□□□□ -0.29
TNFRSF1B-202ENST00000489921 CSN1S1P47710 185 aa13.26□□□□□ -0.29
TNFRSF1B-202ENST00000489921 ZNF415Q09FC8 603 aa13.26□□□□□ -0.29
TNFRSF1B-202ENST00000489921 KHDC3LQ587J8 217 aa13.26□□□□□ -0.29
TNFRSF1B-202ENST00000489921 LYPD5Q6UWN5 251 aa13.26□□□□□ -0.29
TNFRSF1B-202ENST00000489921 C8orf49Q96NF6 230 aa13.26□□□□□ -0.29
TNFRSF1B-202ENST00000489921 MBD2Q9UBB5 411 aa13.26□□□□□ -0.29
TNFRSF1B-202ENST00000489921 LENEPQ9Y5L5 61 aa13.26□□□□□ -0.29
TNFRSF1B-202ENST00000489921 SSNA1O43805 119 aa13.25□□□□□ -0.29
TNFRSF1B-202ENST00000489921 NXPH4O95158 308 aa13.25□□□□□ -0.29
TNFRSF1B-202ENST00000489921 IQCF2Q8IXL9 164 aa13.25□□□□□ -0.29
TNFRSF1B-202ENST00000489921 RASL10AQ92737 203 aa13.25□□□□□ -0.29
TNFRSF1B-202ENST00000489921 IFNA5P01569 189 aa13.24□□□□□ -0.29
TNFRSF1B-202ENST00000489921 SFTA3P0C7M3 94 aa13.24□□□□□ -0.29
TNFRSF1B-202ENST00000489921 SLAQ13239 276 aa13.24□□□□□ -0.29
TNFRSF1B-202ENST00000489921 MAPKAPK5-AS1Q8N8E1 139 aa13.24□□□□□ -0.29
TNFRSF1B-202ENST00000489921 SCGB1C1Q8TD33 95 aa13.24□□□□□ -0.29
TNFRSF1B-202ENST00000489921 TMED6Q8WW62 240 aa13.24□□□□□ -0.29
TNFRSF1B-202ENST00000489921 TVP23CQ96ET8 276 aa13.24□□□□□ -0.29
TNFRSF1B-202ENST00000489921 ZNF479Q96JC4 524 aa13.24□□□□□ -0.29
TNFRSF1B-202ENST00000489921 TNFRSF18Q9Y5U5 241 aa13.24□□□□□ -0.29
TNFRSF1B-202ENST00000489921 PGPA6NDG6 321 aa13.23□□□□□ -0.29
TNFRSF1B-202ENST00000489921 PET100P0DJ07 73 aa13.23□□□□□ -0.29
TNFRSF1B-202ENST00000489921 TAS2R45P59539 299 aa13.23□□□□□ -0.29
TNFRSF1B-202ENST00000489921 TMEM183BQ1AE95 376 aa13.23□□□□□ -0.29
TNFRSF1B-202ENST00000489921 TDRG1Q3Y452 100 aa13.23□□□□□ -0.29
TNFRSF1B-202ENST00000489921 TMEM183AQ8IXX5 376 aa13.23□□□□□ -0.29
TNFRSF1B-202ENST00000489921 OR10G4Q8NGN3 311 aa13.23□□□□□ -0.29
TNFRSF1B-202ENST00000489921 HYLS1Q96M11 299 aa13.23□□□□□ -0.29
TNFRSF1B-202ENST00000489921 OTORQ9NRC9 128 aa13.23□□□□□ -0.29
TNFRSF1B-202ENST00000489921 MRPL23Q16540 153 aaKnown RBP13.22□□□□□ -0.29
TNFRSF1B-202ENST00000489921 SPXQ9BT56 116 aa13.22□□□□□ -0.29
TNFRSF1B-202ENST00000489921 K7EQD1 137 aa13.21□□□□□ -0.29
TNFRSF1B-202ENST00000489921 GNRH2O43555 120 aa13.21□□□□□ -0.29
TNFRSF1B-202ENST00000489921 RAB2AP61019 212 aa13.21□□□□□ -0.29
TNFRSF1B-202ENST00000489921 FAM159AQ6UWV7 190 aa13.21□□□□□ -0.29
TNFRSF1B-202ENST00000489921 TRAV8-1A0A0A6YYK1 113 aa13.2□□□□□ -0.3
TNFRSF1B-202ENST00000489921 DEFA1P59665 94 aa13.2□□□□□ -0.3
TNFRSF1B-202ENST00000489921 DEFA3P59666 94 aa13.2□□□□□ -0.3
TNFRSF1B-202ENST00000489921 NEGR1Q7Z3B1 354 aa13.2□□□□□ -0.3
TNFRSF1B-202ENST00000489921 Q8N1X5 172 aa13.2□□□□□ -0.3
TNFRSF1B-202ENST00000489921 ARL6IP6Q8N6S5 226 aa13.2□□□□□ -0.3
TNFRSF1B-202ENST00000489921 TRGV11A0A075B6L2 103 aa13.19□□□□□ -0.3
TNFRSF1B-202ENST00000489921 TRGV4A0A0C4DH28 118 aa13.19□□□□□ -0.3
TNFRSF1B-202ENST00000489921 ACOT6Q3I5F7 207 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF1B-202ENST00000489921 PQLC2Q6ZP29 291 aa13.19□□□□□ -0.3
TNFRSF1B-202ENST00000489921 GOLT1AQ6ZVE7 132 aa13.19□□□□□ -0.3
TNFRSF1B-202ENST00000489921 RPH3ALQ9UNE2 315 aa13.19□□□□□ -0.3
TNFRSF1B-202ENST00000489921 IGHV3-16A0A0C4DH30 117 aa13.18□□□□□ -0.3
TNFRSF1B-202ENST00000489921 HMGB3O15347 200 aaKnown RBP13.18□□□□□ -0.3
TNFRSF1B-202ENST00000489921 GNG5P63218 68 aa13.18□□□□□ -0.3
TNFRSF1B-202ENST00000489921 FAT1Q14517 4588 aa13.17□□□□□ -0.3
TNFRSF1B-202ENST00000489921 F6UZH7 168 aa13.17□□□□□ -0.3
TNFRSF1B-202ENST00000489921 FUSP35637 526 aaKnown RBP eCLIP13.17□□□□□ -0.3
TNFRSF1B-202ENST00000489921 WFDC10BQ8IUB3 73 aa13.17□□□□□ -0.3
TNFRSF1B-202ENST00000489921 OR10G9Q8NGN4 311 aa13.17□□□□□ -0.3
TNFRSF1B-202ENST00000489921 OR10G7Q8NGN6 311 aa13.17□□□□□ -0.3
TNFRSF1B-202ENST00000489921 CMTM2Q8TAZ6 248 aa13.17□□□□□ -0.3
TNFRSF1B-202ENST00000489921 NAGKQ9UJ70 344 aa13.17□□□□□ -0.3
TNFRSF1B-202ENST00000489921 TRAV4A0A0B4J268 109 aa13.16□□□□□ -0.3
TNFRSF1B-202ENST00000489921 A0A1W2PPV4 95 aa13.16□□□□□ -0.3
TNFRSF1B-202ENST00000489921 TYMSP04818 313 aa13.16□□□□□ -0.3
TNFRSF1B-202ENST00000489921 GYPEP15421 78 aa13.16□□□□□ -0.3
TNFRSF1B-202ENST00000489921 FAM74A1Q5RGS3 127 aa13.16□□□□□ -0.3
TNFRSF1B-202ENST00000489921 SUN5Q8TC36 379 aa13.16□□□□□ -0.3
TNFRSF1B-202ENST00000489921 ALG5Q9Y673 324 aa13.16□□□□□ -0.3
TNFRSF1B-202ENST00000489921 TRAV21A0A0B4J279 112 aa13.15□□□□□ -0.3
TNFRSF1B-202ENST00000489921 LOC100131303A0A0U1RQF7 123 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 402.5 ms