RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 MIC13Q5XKP0 118 aa4.94□□□□□ -1.62
COL9A1-209ENST00000489861 NFE4Q86UQ8 179 aa4.94□□□□□ -1.62
COL9A1-209ENST00000489861 SCGB1C1Q8TD33 95 aa4.94□□□□□ -1.62
COL9A1-209ENST00000489861 ARPC5LQ9BPX5 153 aa4.94□□□□□ -1.62
COL9A1-209ENST00000489861 NPCDR1Q9BY65 106 aa4.94□□□□□ -1.62
COL9A1-209ENST00000489861 MRPS16Q9Y3D3 137 aaKnown RBP4.94□□□□□ -1.62
COL9A1-209ENST00000489861 TRBV19A0A075B6N1 114 aa4.93□□□□□ -1.62
COL9A1-209ENST00000489861 TRAV26-1A0A087WT03 109 aa4.93□□□□□ -1.62
COL9A1-209ENST00000489861 TRBV7-9A0A0J9YWB2 115 aa4.93□□□□□ -1.62
COL9A1-209ENST00000489861 IGSF23A1L1A6 192 aa4.93□□□□□ -1.62
COL9A1-209ENST00000489861 NPIPB6E9PJ23 425 aa4.93□□□□□ -1.62
COL9A1-209ENST00000489861 HNRNPA3P51991 378 aaKnown RBP4.93□□□□□ -1.62
COL9A1-209ENST00000489861 IL15RAQ13261 267 aa4.93□□□□□ -1.62
COL9A1-209ENST00000489861 ESRGQ1W209 222 aa4.93□□□□□ -1.62
COL9A1-209ENST00000489861 KHDC3LQ587J8 217 aa4.93□□□□□ -1.62
COL9A1-209ENST00000489861 IBA57Q5T440 356 aaKnown RBP4.93□□□□□ -1.62
COL9A1-209ENST00000489861 IGFL4Q6B9Z1 124 aa4.93□□□□□ -1.62
COL9A1-209ENST00000489861 EIF4E3Q8N5X7 224 aaKnown RBP4.93□□□□□ -1.62
COL9A1-209ENST00000489861 LINC00612Q8N6U2 182 aa4.93□□□□□ -1.62
COL9A1-209ENST00000489861 OR5C1Q8NGR4 320 aa4.93□□□□□ -1.62
COL9A1-209ENST00000489861 SAT2Q96F10 170 aaPredicted RBP4.93□□□□□ -1.62
COL9A1-209ENST00000489861 LINC00467Q9BRT7 94 aa4.93□□□□□ -1.62
COL9A1-209ENST00000489861 MARVELD1Q9BSK0 173 aa4.93□□□□□ -1.62
COL9A1-209ENST00000489861 KRTAP9-9Q9BYP9 154 aa4.93□□□□□ -1.62
COL9A1-209ENST00000489861 KRTAP9-4Q9BYQ2 154 aa4.93□□□□□ -1.62
COL9A1-209ENST00000489861 C11orf1Q9H5F2 150 aa4.93□□□□□ -1.62
COL9A1-209ENST00000489861 ICOSQ9Y6W8 199 aa4.93□□□□□ -1.62
COL9A1-209ENST00000489861 IGLV5-52A0A0A0MRZ9 124 aa4.92□□□□□ -1.62
COL9A1-209ENST00000489861 GAGE12BA1L429 117 aa4.92□□□□□ -1.62
COL9A1-209ENST00000489861 PLAC8L1A1L4L8 177 aa4.92□□□□□ -1.62
COL9A1-209ENST00000489861 C7orf71A4D174 169 aa4.92□□□□□ -1.62
COL9A1-209ENST00000489861 RBAKDNA6NC62 111 aa4.92□□□□□ -1.62
COL9A1-209ENST00000489861 RGS13O14921 159 aa4.92□□□□□ -1.62
COL9A1-209ENST00000489861 GAGE7O76087 117 aa4.92□□□□□ -1.62
COL9A1-209ENST00000489861 NBEAP1P0C6P0 100 aa4.92□□□□□ -1.62
COL9A1-209ENST00000489861 GAGE12FP0CL80 117 aa4.92□□□□□ -1.62
COL9A1-209ENST00000489861 GAGE12GP0CL81 117 aa4.92□□□□□ -1.62
COL9A1-209ENST00000489861 GAGE12IP0CL82 117 aa4.92□□□□□ -1.62
COL9A1-209ENST00000489861 ZNF415Q09FC8 603 aa4.92□□□□□ -1.62
COL9A1-209ENST00000489861 ANXA2RQ3ZCQ2 193 aa4.92□□□□□ -1.62
COL9A1-209ENST00000489861 LRRC37A5PQ49AS3 106 aa4.92□□□□□ -1.62
COL9A1-209ENST00000489861 GFI1BQ5VTD9 330 aa4.92□□□□□ -1.62
COL9A1-209ENST00000489861 Q6ZSA8 131 aa4.92□□□□□ -1.62
COL9A1-209ENST00000489861 PCNPQ8WW12 178 aaKnown RBP4.92□□□□□ -1.62
COL9A1-209ENST00000489861 ASB13Q8WXK3 278 aa4.92□□□□□ -1.62
COL9A1-209ENST00000489861 ATP5SQ99766 215 aa4.92□□□□□ -1.62
COL9A1-209ENST00000489861 PAXXQ9BUH6 204 aa4.92□□□□□ -1.62
COL9A1-209ENST00000489861 WDR61Q9GZS3 305 aaKnown RBP4.92□□□□□ -1.62
COL9A1-209ENST00000489861 SH3BGRL3Q9H299 93 aa4.92□□□□□ -1.62
COL9A1-209ENST00000489861 OR51M1Q9H341 326 aa4.92□□□□□ -1.62
COL9A1-209ENST00000489861 TRAV12-3A0A0B4J271 114 aa4.91□□□□□ -1.62
COL9A1-209ENST00000489861 A0A1W2PPV4 95 aa4.91□□□□□ -1.62
COL9A1-209ENST00000489861 H3BQ15 152 aa4.91□□□□□ -1.62
COL9A1-209ENST00000489861 SLC17A3O00476 420 aa4.91□□□□□ -1.62
COL9A1-209ENST00000489861 SIVA1O15304 175 aa4.91□□□□□ -1.62
COL9A1-209ENST00000489861 OR7C2O60412 319 aa4.91□□□□□ -1.62
COL9A1-209ENST00000489861 GPX1P07203 203 aa4.91□□□□□ -1.62
COL9A1-209ENST00000489861 AZU1P20160 251 aa4.91□□□□□ -1.62
COL9A1-209ENST00000489861 NHLH2Q02577 135 aa4.91□□□□□ -1.62
COL9A1-209ENST00000489861 MRPL23Q16540 153 aaKnown RBP4.91□□□□□ -1.62
COL9A1-209ENST00000489861 ACOT6Q3I5F7 207 aaPredicted RBP4.91□□□□□ -1.62
COL9A1-209ENST00000489861 C9orf47Q6ZRZ4 202 aa4.91□□□□□ -1.62
COL9A1-209ENST00000489861 SH2D6Q7Z4S9 175 aa4.91□□□□□ -1.62
COL9A1-209ENST00000489861 ARL6IP6Q8N6S5 226 aa4.91□□□□□ -1.62
COL9A1-209ENST00000489861 CMTM2Q8TAZ6 248 aa4.91□□□□□ -1.62
COL9A1-209ENST00000489861 THAP6Q8TBB0 222 aa4.91□□□□□ -1.62
COL9A1-209ENST00000489861 BLNKQ8WV28 456 aa4.91□□□□□ -1.62
COL9A1-209ENST00000489861 PPP1R1CQ8WVI7 109 aa4.91□□□□□ -1.62
COL9A1-209ENST00000489861 PARD6GQ9BYG4 376 aaPredicted RBP4.91□□□□□ -1.62
COL9A1-209ENST00000489861 CRCT1Q9UGL9 99 aa4.91□□□□□ -1.62
COL9A1-209ENST00000489861 PRO0255Q9UI72 69 aa4.91□□□□□ -1.62
COL9A1-209ENST00000489861 FUT9Q9Y231 359 aa4.91□□□□□ -1.62
COL9A1-209ENST00000489861 HSPB11Q9Y547 144 aa4.91□□□□□ -1.62
COL9A1-209ENST00000489861 LENEPQ9Y5L5 61 aa4.91□□□□□ -1.62
COL9A1-209ENST00000489861 TRGV1A0A0A0MS02 117 aa4.9□□□□□ -1.63
COL9A1-209ENST00000489861 TRAV5A0A0B4J249 113 aa4.9□□□□□ -1.63
COL9A1-209ENST00000489861 PAX4O43316 350 aa4.9□□□□□ -1.63
COL9A1-209ENST00000489861 MPC2O95563 127 aa4.9□□□□□ -1.63
COL9A1-209ENST00000489861 ORM1P02763 201 aa4.9□□□□□ -1.63
COL9A1-209ENST00000489861 CT45A10P0DMU9 189 aa4.9□□□□□ -1.63
COL9A1-209ENST00000489861 CRISP2P16562 243 aa4.9□□□□□ -1.63
COL9A1-209ENST00000489861 RPL12P30050 165 aaKnown RBP4.9□□□□□ -1.63
COL9A1-209ENST00000489861 ZNF138P52744 262 aa4.9□□□□□ -1.63
COL9A1-209ENST00000489861 TCL1AP56279 114 aa4.9□□□□□ -1.63
COL9A1-209ENST00000489861 UBE2L3P68036 154 aaKnown RBP4.9□□□□□ -1.63
COL9A1-209ENST00000489861 ZNF266Q14584 549 aa4.9□□□□□ -1.63
COL9A1-209ENST00000489861 ODF1Q14990 250 aa4.9□□□□□ -1.63
COL9A1-209ENST00000489861 FCN2Q15485 313 aa4.9□□□□□ -1.63
COL9A1-209ENST00000489861 MORN5Q5VZ52 161 aa4.9□□□□□ -1.63
COL9A1-209ENST00000489861 PQLC2Q6ZP29 291 aa4.9□□□□□ -1.63
COL9A1-209ENST00000489861 C10orf126Q8N4M7 172 aa4.9□□□□□ -1.63
COL9A1-209ENST00000489861 TXNDC17Q9BRA2 123 aa4.9□□□□□ -1.63
COL9A1-209ENST00000489861 TRGV11A0A075B6L2 103 aa4.89□□□□□ -1.63
COL9A1-209ENST00000489861 A0A0J9YY99 117 aa4.89□□□□□ -1.63
COL9A1-209ENST00000489861 SERTM2A0A1B0GWG4 89 aa4.89□□□□□ -1.63
COL9A1-209ENST00000489861 KLLNB2CW77 178 aa4.89□□□□□ -1.63
COL9A1-209ENST00000489861 H3BTX0 84 aa4.89□□□□□ -1.63
COL9A1-209ENST00000489861 J3KRW8 73 aa4.89□□□□□ -1.63
COL9A1-209ENST00000489861 K7EQM0 130 aa4.89□□□□□ -1.63
COL9A1-209ENST00000489861 CIDEAO60543 219 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms