RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 KRTAP26-1Q6PEX3 210 aa1.85□□□□□ -2.11
VPS26A-206ENST00000489794 C10orf111Q8N326 155 aa1.85□□□□□ -2.11
VPS26A-206ENST00000489794 OR10AC1Q8NH08 325 aa1.85□□□□□ -2.11
VPS26A-206ENST00000489794 ZNF431Q8TF32 576 aaPredicted RBP1.85□□□□□ -2.11
VPS26A-206ENST00000489794 ARL11Q969Q4 196 aa1.85□□□□□ -2.11
VPS26A-206ENST00000489794 LINC00052Q96N35 136 aa1.85□□□□□ -2.11
VPS26A-206ENST00000489794 NAA38Q9BRA0 125 aaKnown RBP1.85□□□□□ -2.11
VPS26A-206ENST00000489794 KLK9Q9UKQ9 250 aa1.85□□□□□ -2.11
VPS26A-206ENST00000489794 MYOFQ9NZM1 2061 aa1.84□□□□□ -2.11
VPS26A-206ENST00000489794 FGD6Q6ZV73 1430 aa1.84□□□□□ -2.11
VPS26A-206ENST00000489794 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.84□□□□□ -2.11
VPS26A-206ENST00000489794 PNMA8CA0A1B0GUJ8 204 aa1.84□□□□□ -2.11
VPS26A-206ENST00000489794 ZNF670-ZNF695F2Z2N8 137 aa1.84□□□□□ -2.11
VPS26A-206ENST00000489794 F8W1H4 67 aa1.84□□□□□ -2.11
VPS26A-206ENST00000489794 CCL16O15467 120 aa1.84□□□□□ -2.11
VPS26A-206ENST00000489794 TPST1O60507 370 aa1.84□□□□□ -2.11
VPS26A-206ENST00000489794 NCR2O95944 276 aa1.84□□□□□ -2.11
VPS26A-206ENST00000489794 RRAS2P62070 204 aaPredicted RBP1.84□□□□□ -2.11
VPS26A-206ENST00000489794 FAM74A1Q5RGS3 127 aa1.84□□□□□ -2.11
VPS26A-206ENST00000489794 FOXI2Q6ZQN5 318 aa1.84□□□□□ -2.11
VPS26A-206ENST00000489794 C1orf54Q8WWF1 131 aa1.84□□□□□ -2.11
VPS26A-206ENST00000489794 CIB3Q96Q77 187 aaPredicted RBP1.84□□□□□ -2.11
VPS26A-206ENST00000489794 KRTAP4-1Q9BYQ7 146 aa1.84□□□□□ -2.11
VPS26A-206ENST00000489794 LINC00470Q9BZP3 86 aa1.84□□□□□ -2.11
VPS26A-206ENST00000489794 CDC42SE1Q9NRR8 79 aa1.84□□□□□ -2.11
VPS26A-206ENST00000489794 ORMDL1Q9P0S3 153 aa1.84□□□□□ -2.11
VPS26A-206ENST00000489794 LSM2Q9Y333 95 aaKnown RBP1.84□□□□□ -2.11
VPS26A-206ENST00000489794 LAMB2P55268 1798 aa1.84□□□□□ -2.12
VPS26A-206ENST00000489794 IBTKQ9P2D0 1353 aaPredicted RBP1.84□□□□□ -2.12
VPS26A-206ENST00000489794 COL4A1P02462 1669 aa1.83□□□□□ -2.12
VPS26A-206ENST00000489794 PHLPP1O60346 1717 aa1.83□□□□□ -2.12
VPS26A-206ENST00000489794 IGHV1-24A0A0C4DH33 117 aa1.83□□□□□ -2.12
VPS26A-206ENST00000489794 ZNF563Q8TA94 476 aa1.83□□□□□ -2.12
VPS26A-206ENST00000489794 MPC1Q9Y5U8 109 aa1.83□□□□□ -2.12
VPS26A-206ENST00000489794 MYH13Q9UKX3 1938 aa1.83□□□□□ -2.12
VPS26A-206ENST00000489794 INTS1Q8N201 2190 aaKnown RBP1.82□□□□□ -2.12
VPS26A-206ENST00000489794 MYH6P13533 1939 aa1.82□□□□□ -2.12
VPS26A-206ENST00000489794 HELZP42694 1942 aaKnown RBP1.82□□□□□ -2.12
VPS26A-206ENST00000489794 A6NN06 94 aa1.82□□□□□ -2.12
VPS26A-206ENST00000489794 LINC00587B1AMM8 73 aa1.82□□□□□ -2.12
VPS26A-206ENST00000489794 FAM25AB3EWG3 89 aa1.82□□□□□ -2.12
VPS26A-206ENST00000489794 FAM25CB3EWG5 89 aa1.82□□□□□ -2.12
VPS26A-206ENST00000489794 FAM25GB3EWG6 89 aa1.82□□□□□ -2.12
VPS26A-206ENST00000489794 RBP4P02753 201 aa1.82□□□□□ -2.12
VPS26A-206ENST00000489794 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.82□□□□□ -2.12
VPS26A-206ENST00000489794 SMIM7Q9BQ49 75 aa1.82□□□□□ -2.12
VPS26A-206ENST00000489794 RP1L1Q8IWN7 2480 aaPredicted RBP1.82□□□□□ -2.12
VPS26A-206ENST00000489794 UNC13CQ8NB66 2214 aa1.82□□□□□ -2.12
VPS26A-206ENST00000489794 PTPRFP10586 1907 aa1.81□□□□□ -2.12
VPS26A-206ENST00000489794 ARFGEF3Q5TH69 2177 aa1.81□□□□□ -2.12
VPS26A-206ENST00000489794 TRBV6-4A0A1B0GX49 114 aa1.81□□□□□ -2.12
VPS26A-206ENST00000489794 H3BRM9 83 aa1.81□□□□□ -2.12
VPS26A-206ENST00000489794 COX7CP15954 63 aa1.81□□□□□ -2.12
VPS26A-206ENST00000489794 SELENOWP63302 87 aa1.81□□□□□ -2.12
VPS26A-206ENST00000489794 PLGLB1Q02325 96 aa1.81□□□□□ -2.12
VPS26A-206ENST00000489794 ASB16-AS1Q495Z4 193 aa1.81□□□□□ -2.12
VPS26A-206ENST00000489794 IZUMO2Q6UXV1 221 aa1.81□□□□□ -2.12
VPS26A-206ENST00000489794 OR10AG1Q8NH19 301 aa1.81□□□□□ -2.12
VPS26A-206ENST00000489794 ROCK2O75116 1388 aaKnown RBP1.81□□□□□ -2.12
VPS26A-206ENST00000489794 CECR2Q9BXF3 1484 aa1.81□□□□□ -2.12
VPS26A-206ENST00000489794 WDR97A6NE52 1622 aa1.8□□□□□ -2.12
VPS26A-206ENST00000489794 IFITM5A6NNB3 132 aa1.8□□□□□ -2.12
VPS26A-206ENST00000489794 CDC42EP2O14613 210 aa1.8□□□□□ -2.12
VPS26A-206ENST00000489794 DLEU1O43261 78 aa1.8□□□□□ -2.12
VPS26A-206ENST00000489794 EMX2Q04743 252 aa1.8□□□□□ -2.12
VPS26A-206ENST00000489794 SNX29P2Q8IUI4 249 aa1.8□□□□□ -2.12
VPS26A-206ENST00000489794 SDK1Q7Z5N4 2213 aa1.8□□□□□ -2.12
VPS26A-206ENST00000489794 MYOM3Q5VTT5 1437 aa1.8□□□□□ -2.12
VPS26A-206ENST00000489794 KIAA1549LQ6ZVL6 1849 aa1.8□□□□□ -2.12
VPS26A-206ENST00000489794 TRPM7Q96QT4 1865 aa1.8□□□□□ -2.12
VPS26A-206ENST00000489794 MYH7P12883 1935 aa1.79□□□□□ -2.12
VPS26A-206ENST00000489794 TRBV20-1A0A075B6N2 111 aa1.79□□□□□ -2.12
VPS26A-206ENST00000489794 A0A0G2JMM0 328 aa1.79□□□□□ -2.12
VPS26A-206ENST00000489794 A0A1W2PPB8 328 aa1.79□□□□□ -2.12
VPS26A-206ENST00000489794 BBIP1A8MTZ0 92 aa1.79□□□□□ -2.12
VPS26A-206ENST00000489794 KIR3DP1A8MWS1 328 aa1.79□□□□□ -2.12
VPS26A-206ENST00000489794 HCRTO43612 131 aa1.79□□□□□ -2.12
VPS26A-206ENST00000489794 YPEL1O60688 119 aa1.79□□□□□ -2.12
VPS26A-206ENST00000489794 MRPS14O60783 128 aaKnown RBP1.79□□□□□ -2.12
VPS26A-206ENST00000489794 DNAL4O96015 105 aa1.79□□□□□ -2.12
VPS26A-206ENST00000489794 SPCS2Q15005 226 aa1.79□□□□□ -2.12
VPS26A-206ENST00000489794 C5orf17Q8NAS9 161 aa1.79□□□□□ -2.12
VPS26A-206ENST00000489794 PTPRGP23470 1445 aa1.79□□□□□ -2.12
VPS26A-206ENST00000489794 GRIN2AQ12879 1464 aa1.79□□□□□ -2.12
VPS26A-206ENST00000489794 WDR7Q9Y4E6 1490 aa1.79□□□□□ -2.12
VPS26A-206ENST00000489794 ANK1P16157 1881 aa1.79□□□□□ -2.12
VPS26A-206ENST00000489794 ALPK3Q96L96 1907 aa1.79□□□□□ -2.12
VPS26A-206ENST00000489794 FOCADQ5VW36 1801 aa1.78□□□□□ -2.12
VPS26A-206ENST00000489794 GUCA1AP43080 201 aaPredicted RBP1.78□□□□□ -2.12
VPS26A-206ENST00000489794 MPV17LQ2QL34 196 aa1.78□□□□□ -2.12
VPS26A-206ENST00000489794 SPRNQ5BIV9 151 aa1.78□□□□□ -2.12
VPS26A-206ENST00000489794 Q6ZSA8 131 aa1.78□□□□□ -2.12
VPS26A-206ENST00000489794 SDF2Q99470 211 aa1.78□□□□□ -2.12
VPS26A-206ENST00000489794 C2orf88Q9BSF0 95 aa1.78□□□□□ -2.12
VPS26A-206ENST00000489794 TMEM191AQ9H0A3 160 aa1.78□□□□□ -2.12
VPS26A-206ENST00000489794 MED9Q9NWA0 146 aa1.78□□□□□ -2.12
VPS26A-206ENST00000489794 NOP16Q9Y3C1 178 aaKnown RBP1.78□□□□□ -2.12
VPS26A-206ENST00000489794 EXPH5Q8NEV8 1989 aa1.78□□□□□ -2.13
VPS26A-206ENST00000489794 SIP14410 1827 aa1.77□□□□□ -2.13
VPS26A-206ENST00000489794 KIF13AQ9H1H9 1805 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms