RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 NOL4LQ96MY1 436 aaPredicted RBP4.87□□□□□ -1.63
SF3A3-208ENST00000489537 ODF3Q96PU9 254 aa4.87□□□□□ -1.63
SF3A3-208ENST00000489537 RHPN1-AS1Q9BWJ2 59 aa4.87□□□□□ -1.63
SF3A3-208ENST00000489537 KRTAP4-2Q9BYR5 136 aa4.87□□□□□ -1.63
SF3A3-208ENST00000489537 PLXNB1O43157 2135 aa4.87□□□□□ -1.63
SF3A3-208ENST00000489537 FBN3Q75N90 2809 aa4.87□□□□□ -1.63
SF3A3-208ENST00000489537 STAB1Q9NY15 2570 aa4.86□□□□□ -1.63
SF3A3-208ENST00000489537 A0A1B0GXF2 115 aa4.86□□□□□ -1.63
SF3A3-208ENST00000489537 SH2D7A6NKC9 451 aaPredicted RBP4.86□□□□□ -1.63
SF3A3-208ENST00000489537 H3BTX0 84 aa4.86□□□□□ -1.63
SF3A3-208ENST00000489537 DUSP14O95147 198 aaKnown RBP4.86□□□□□ -1.63
SF3A3-208ENST00000489537 PPBPP02775 128 aa4.86□□□□□ -1.63
SF3A3-208ENST00000489537 RPL11P62913 178 aaKnown RBP4.86□□□□□ -1.63
SF3A3-208ENST00000489537 CACNG7P62955 275 aa4.86□□□□□ -1.63
SF3A3-208ENST00000489537 KLF5Q13887 457 aaPredicted RBP4.86□□□□□ -1.63
SF3A3-208ENST00000489537 TMEM136Q6ZRR5 245 aa4.86□□□□□ -1.63
SF3A3-208ENST00000489537 HIST3H2BBQ8N257 126 aa4.86□□□□□ -1.63
SF3A3-208ENST00000489537 SIGLECL1Q8N7X8 197 aa4.86□□□□□ -1.63
SF3A3-208ENST00000489537 NHLRC2Q8NBF2 726 aa4.86□□□□□ -1.63
SF3A3-208ENST00000489537 ZNF738Q8NE65 137 aa4.86□□□□□ -1.63
SF3A3-208ENST00000489537 C4orf3Q8WVX3 66 aa4.86□□□□□ -1.63
SF3A3-208ENST00000489537 DPF1Q92782 380 aa4.86□□□□□ -1.63
SF3A3-208ENST00000489537 ZNF702PQ9H963 129 aa4.86□□□□□ -1.63
SF3A3-208ENST00000489537 LINC00527Q9UJ94 153 aa4.86□□□□□ -1.63
SF3A3-208ENST00000489537 LAMTOR2Q9Y2Q5 125 aa4.86□□□□□ -1.63
SF3A3-208ENST00000489537 SMAD5-AS1Q9Y6J3 95 aa4.86□□□□□ -1.63
SF3A3-208ENST00000489537 MXRA5Q9NR99 2828 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 TRAV8-1A0A0A6YYK1 113 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 TRAV25A0A0B4J276 109 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 TRAV21A0A0B4J279 112 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 IGHV3-35A0A0C4DH35 117 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 A0A1B0GUS0 222 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 LINC01619G3V211 115 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 M0R3E3 92 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 PPP1R17O96001 155 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 IGHV3-11P01762 117 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 CBLN1P23435 193 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 TM4SF20Q53R12 229 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 EBLN2Q6P2I7 272 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 ZNF493Q6ZR52 646 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 BCL6BQ8N143 479 aaPredicted RBP4.85□□□□□ -1.63
SF3A3-208ENST00000489537 KLHDC1Q8N7A1 406 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 FER1L6-AS1Q8NA97 138 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 GATD1Q8NB37 220 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 CHCHD1Q96BP2 118 aaKnown RBP4.85□□□□□ -1.63
SF3A3-208ENST00000489537 ZC2HC1AQ96GY0 325 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 KCNS1Q96KK3 526 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 C20orf173Q96LM9 149 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 C17orf77Q96MU5 243 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 C12orf57Q99622 126 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 CNFNQ9BYD5 112 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 KLK15Q9H2R5 256 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 C16orf95Q9H693 158 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 YAE1D1Q9NRH1 226 aa4.85□□□□□ -1.63
SF3A3-208ENST00000489537 OR5AL1P0C617 328 aa4.84□□□□□ -1.63
SF3A3-208ENST00000489537 FABP4P15090 132 aa4.84□□□□□ -1.63
SF3A3-208ENST00000489537 SRD5A1P18405 259 aa4.84□□□□□ -1.63
SF3A3-208ENST00000489537 CTRLP40313 264 aa4.84□□□□□ -1.63
SF3A3-208ENST00000489537 LEPP41159 167 aa4.84□□□□□ -1.63
SF3A3-208ENST00000489537 TCL1AP56279 114 aa4.84□□□□□ -1.63
SF3A3-208ENST00000489537 IQCJQ1A5X6 159 aa4.84□□□□□ -1.63
SF3A3-208ENST00000489537 MRPL54Q6P161 138 aaKnown RBP4.84□□□□□ -1.63
SF3A3-208ENST00000489537 TCF24Q7RTU0 167 aa4.84□□□□□ -1.63
SF3A3-208ENST00000489537 SAMD10Q9BYL1 202 aa4.84□□□□□ -1.63
SF3A3-208ENST00000489537 KRTAP4-11Q9BYQ6 195 aa4.84□□□□□ -1.63
SF3A3-208ENST00000489537 IGKV2-40A0A087WW87 121 aaPredicted RBP4.83□□□□□ -1.64
SF3A3-208ENST00000489537 SH2D1AO60880 128 aa4.83□□□□□ -1.64
SF3A3-208ENST00000489537 CRLF1O75462 422 aa4.83□□□□□ -1.64
SF3A3-208ENST00000489537 HSBP1O75506 76 aa4.83□□□□□ -1.64
SF3A3-208ENST00000489537 NDUFA7O95182 113 aa4.83□□□□□ -1.64
SF3A3-208ENST00000489537 IGKV2D-40P01614 121 aaPredicted RBP4.83□□□□□ -1.64
SF3A3-208ENST00000489537 ORM1P02763 201 aa4.83□□□□□ -1.64
SF3A3-208ENST00000489537 SNRPCP09234 159 aaKnown RBP4.83□□□□□ -1.64
SF3A3-208ENST00000489537 HOXD3P31249 432 aaPredicted RBP4.83□□□□□ -1.64
SF3A3-208ENST00000489537 CAMPP49913 170 aa4.83□□□□□ -1.64
SF3A3-208ENST00000489537 UNQ9165/PRO28630Q6UXU0 137 aa4.83□□□□□ -1.64
SF3A3-208ENST00000489537 IL17RELQ6ZVW7 336 aa4.83□□□□□ -1.64
SF3A3-208ENST00000489537 OR8A1Q8NGG7 326 aa4.83□□□□□ -1.64
SF3A3-208ENST00000489537 OR10D4PQ8NGN7 298 aa4.83□□□□□ -1.64
SF3A3-208ENST00000489537 OR1N2Q8NGR9 330 aa4.83□□□□□ -1.64
SF3A3-208ENST00000489537 PGLYRP4Q96LB8 373 aa4.83□□□□□ -1.64
SF3A3-208ENST00000489537 SGK494Q96LW2 274 aa4.83□□□□□ -1.64
SF3A3-208ENST00000489537 HIST1H2BLQ99880 126 aa4.83□□□□□ -1.64
SF3A3-208ENST00000489537 GPR61Q9BZJ8 451 aa4.83□□□□□ -1.64
SF3A3-208ENST00000489537 AGPAT4-IT1Q9H0P7 198 aa4.83□□□□□ -1.64
SF3A3-208ENST00000489537 SIGLEC8Q9NYZ4 499 aa4.83□□□□□ -1.64
SF3A3-208ENST00000489537 IGHV4-4A0A075B6R2 117 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 LOC102724200A0A096LPH7 203 aaPredicted RBP4.82□□□□□ -1.64
SF3A3-208ENST00000489537 TRAV8-2A0A0B4J237 113 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 C20orf202A1L168 122 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 TMEM213A2RRL7 107 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 DNAJC9-AS1A6NH13 148 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 OR4C46A6NHA9 309 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 LINC01549A6NIU2 74 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 TSTD3H0UI37 97 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 SOCS3O14543 225 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 CA1P00915 261 aaPredicted RBP4.82□□□□□ -1.64
SF3A3-208ENST00000489537 AMBPP02760 352 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 GPX1P07203 203 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 G0S2P27469 103 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms