RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 KRTAP24-1Q3LI83 254 aa13.52□□□□□ -0.25
CD40-206ENST00000489304 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.52□□□□□ -0.25
CD40-206ENST00000489304 RASL11AQ6T310 242 aa13.52□□□□□ -0.25
CD40-206ENST00000489304 RBPMS2Q6ZRY4 209 aaKnown RBP13.52□□□□□ -0.25
CD40-206ENST00000489304 HIST1H2BHQ93079 126 aa13.52□□□□□ -0.25
CD40-206ENST00000489304 FAM19A4Q96LR4 140 aa13.52□□□□□ -0.25
CD40-206ENST00000489304 HIST1H2BNQ99877 126 aa13.52□□□□□ -0.25
CD40-206ENST00000489304 HIST1H2BMQ99879 126 aa13.52□□□□□ -0.25
CD40-206ENST00000489304 GNB1LQ9BYB4 327 aa13.52□□□□□ -0.25
CD40-206ENST00000489304 TRAPPC1Q9Y5R8 145 aa13.52□□□□□ -0.25
CD40-206ENST00000489304 TMEM189A5PLL7 270 aa13.51□□□□□ -0.25
CD40-206ENST00000489304 F6UB75 175 aa13.51□□□□□ -0.25
CD40-206ENST00000489304 FRMD6-AS1P0C7T7 363 aa13.51□□□□□ -0.25
CD40-206ENST00000489304 ZNF688P0C7X2 276 aa13.51□□□□□ -0.25
CD40-206ENST00000489304 TRGC1P0CF51 173 aa13.51□□□□□ -0.25
CD40-206ENST00000489304 DEFB114Q30KQ6 69 aa13.51□□□□□ -0.25
CD40-206ENST00000489304 WDR73Q6P4I2 378 aa13.51□□□□□ -0.25
CD40-206ENST00000489304 PRIMA1Q86XR5 153 aa13.51□□□□□ -0.25
CD40-206ENST00000489304 NDUFA11Q86Y39 141 aa13.51□□□□□ -0.25
CD40-206ENST00000489304 SIGLEC8Q9NYZ4 499 aa13.51□□□□□ -0.25
CD40-206ENST00000489304 GZMBP10144 247 aa13.5□□□□□ -0.25
CD40-206ENST00000489304 FABP9Q0Z7S8 132 aa13.5□□□□□ -0.25
CD40-206ENST00000489304 PSMG4Q5JS54 123 aa13.5□□□□□ -0.25
CD40-206ENST00000489304 MRPL54Q6P161 138 aaKnown RBP13.5□□□□□ -0.25
CD40-206ENST00000489304 ATP5L2Q7Z4Y8 100 aa13.5□□□□□ -0.25
CD40-206ENST00000489304 DYNLRB2Q8TF09 96 aa13.5□□□□□ -0.25
CD40-206ENST00000489304 SAV1Q9H4B6 383 aaPredicted RBP13.5□□□□□ -0.25
CD40-206ENST00000489304 XKRY2A2RUG3 117 aa13.5□□□□□ -0.25
CD40-206ENST00000489304 RPS20P60866 119 aaKnown RBP13.5□□□□□ -0.25
CD40-206ENST00000489304 TMEM61Q8N0U2 210 aa13.5□□□□□ -0.25
CD40-206ENST00000489304 A0A1B0GXF2 115 aa13.49□□□□□ -0.25
CD40-206ENST00000489304 MT-ND6P03923 174 aa13.49□□□□□ -0.25
CD40-206ENST00000489304 S100A6P06703 90 aa13.49□□□□□ -0.25
CD40-206ENST00000489304 TMEM136Q6ZRR5 245 aa13.49□□□□□ -0.25
CD40-206ENST00000489304 ZFAND2AQ8N6M9 145 aa13.49□□□□□ -0.25
CD40-206ENST00000489304 PGLYRP4Q96LB8 373 aa13.49□□□□□ -0.25
CD40-206ENST00000489304 A0A0J9YX75 114 aa13.48□□□□□ -0.25
CD40-206ENST00000489304 CRISP2P16562 243 aa13.48□□□□□ -0.25
CD40-206ENST00000489304 LINC01559Q495D7 138 aa13.48□□□□□ -0.25
CD40-206ENST00000489304 Q6AWC8 147 aa13.48□□□□□ -0.25
CD40-206ENST00000489304 APRG1Q8IVJ8 170 aa13.48□□□□□ -0.25
CD40-206ENST00000489304 TEP1Q99973 2627 aaKnown RBP13.48□□□□□ -0.25
CD40-206ENST00000489304 TRAV25A0A0B4J276 109 aa13.47□□□□□ -0.25
CD40-206ENST00000489304 SNURFLB1AK76 121 aa13.47□□□□□ -0.25
CD40-206ENST00000489304 ZNF575Q86XF7 245 aa13.47□□□□□ -0.25
CD40-206ENST00000489304 MRPL18Q9H0U6 180 aaKnown RBP13.47□□□□□ -0.25
CD40-206ENST00000489304 SORL1Q92673 2214 aa13.47□□□□□ -0.25
CD40-206ENST00000489304 C5orf52A6NGY3 159 aa13.47□□□□□ -0.25
CD40-206ENST00000489304 ORM1P02763 201 aa13.47□□□□□ -0.25
CD40-206ENST00000489304 PRR9Q5T870 116 aa13.47□□□□□ -0.25
CD40-206ENST00000489304 TMSB15BA0A087X1C1 80 aa13.46□□□□□ -0.25
CD40-206ENST00000489304 HLA-DQA1P01909 254 aa13.46□□□□□ -0.25
CD40-206ENST00000489304 SNRPEP62304 92 aaKnown RBP13.46□□□□□ -0.25
CD40-206ENST00000489304 CD300EQ496F6 205 aaPredicted RBP13.46□□□□□ -0.25
CD40-206ENST00000489304 GDF5OSQ5U4N7 250 aa13.46□□□□□ -0.25
CD40-206ENST00000489304 ODF3Q96PU9 254 aa13.46□□□□□ -0.25
CD40-206ENST00000489304 CITED1Q99966 193 aa13.46□□□□□ -0.25
CD40-206ENST00000489304 NIPBLQ6KC79 2804 aaeCLIP13.46□□□□□ -0.26
CD40-206ENST00000489304 HBBP68871 147 aa13.45□□□□□ -0.26
CD40-206ENST00000489304 EBLN2Q6P2I7 272 aa13.45□□□□□ -0.26
CD40-206ENST00000489304 SPAG8Q99932 426 aaPredicted RBP13.45□□□□□ -0.26
CD40-206ENST00000489304 C11orf21Q9P2W6 132 aa13.45□□□□□ -0.26
CD40-206ENST00000489304 RAB4BP61018 213 aa13.44□□□□□ -0.26
CD40-206ENST00000489304 FOXI2Q6ZQN5 318 aa13.44□□□□□ -0.26
CD40-206ENST00000489304 A0A1B0GUT8 65 aa13.44□□□□□ -0.26
CD40-206ENST00000489304 DUSP14O95147 198 aaKnown RBP13.44□□□□□ -0.26
CD40-206ENST00000489304 GPX1P07203 203 aa13.44□□□□□ -0.26
CD40-206ENST00000489304 IGLC6P0CF74 106 aa13.44□□□□□ -0.26
CD40-206ENST00000489304 NDUFA6P56556 154 aa13.44□□□□□ -0.26
CD40-206ENST00000489304 SPATA3Q8NHX4 192 aa13.44□□□□□ -0.26
CD40-206ENST00000489304 JMJD1CQ15652 2540 aa13.44□□□□□ -0.26
CD40-206ENST00000489304 TRAV21A0A0B4J279 112 aa13.43□□□□□ -0.26
CD40-206ENST00000489304 IGKV3D-20A0A0C4DH25 116 aa13.43□□□□□ -0.26
CD40-206ENST00000489304 OR4C46A6NHA9 309 aa13.43□□□□□ -0.26
CD40-206ENST00000489304 KLLNB2CW77 178 aa13.43□□□□□ -0.26
CD40-206ENST00000489304 CD33P20138 364 aa13.43□□□□□ -0.26
CD40-206ENST00000489304 AGRNO00468 2067 aa13.43□□□□□ -0.26
CD40-206ENST00000489304 A0A1B0GW15 77 aa13.42□□□□□ -0.26
CD40-206ENST00000489304 UBE2CO00762 179 aa13.42□□□□□ -0.26
CD40-206ENST00000489304 ARMS2P0C7Q2 107 aa13.42□□□□□ -0.26
CD40-206ENST00000489304 CTRLP40313 264 aa13.42□□□□□ -0.26
CD40-206ENST00000489304 LEPP41159 167 aa13.42□□□□□ -0.26
CD40-206ENST00000489304 CAMPP49913 170 aa13.42□□□□□ -0.26
CD40-206ENST00000489304 RIGQ13278 110 aa13.42□□□□□ -0.26
CD40-206ENST00000489304 LYZL1Q6UWQ5 148 aa13.42□□□□□ -0.26
CD40-206ENST00000489304 ZNF256Q9Y2P7 627 aaPredicted RBP13.42□□□□□ -0.26
CD40-206ENST00000489304 PF4P02776 101 aa13.42□□□□□ -0.26
CD40-206ENST00000489304 DEFB131AP59861 70 aa13.42□□□□□ -0.26
CD40-206ENST00000489304 Q6ZQT7 251 aa13.42□□□□□ -0.26
CD40-206ENST00000489304 LINC00482Q8N8I6 264 aa13.42□□□□□ -0.26
CD40-206ENST00000489304 FER1L6-AS1Q8NA97 138 aa13.42□□□□□ -0.26
CD40-206ENST00000489304 A8MTW9 85 aa13.41□□□□□ -0.26
CD40-206ENST00000489304 J3KRW8 73 aa13.41□□□□□ -0.26
CD40-206ENST00000489304 APCSP02743 223 aa13.41□□□□□ -0.26
CD40-206ENST00000489304 HOXA5P20719 270 aa13.41□□□□□ -0.26
CD40-206ENST00000489304 RNASE4P34096 147 aaKnown RBP13.41□□□□□ -0.26
CD40-206ENST00000489304 BORCS7Q96B45 105 aa13.41□□□□□ -0.26
CD40-206ENST00000489304 GRIFINA4D1Z8 144 aa13.4□□□□□ -0.26
CD40-206ENST00000489304 SAP30O75446 220 aa13.4□□□□□ -0.26
CD40-206ENST00000489304 S100A8P05109 93 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms