RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 CMTM2Q8TAZ6 248 aa14.82□□□□□ -0.04
LIME1-207ENST00000489212 SUN5Q8TC36 379 aa14.82□□□□□ -0.04
LIME1-207ENST00000489212 KLF12Q9Y4X4 402 aa14.82□□□□□ -0.04
LIME1-207ENST00000489212 SMLR1H3BR10 107 aa14.81□□□□□ -0.04
LIME1-207ENST00000489212 RGS13O14921 159 aa14.81□□□□□ -0.04
LIME1-207ENST00000489212 HOXA5P20719 270 aa14.81□□□□□ -0.04
LIME1-207ENST00000489212 GCHFRP30047 84 aa14.81□□□□□ -0.04
LIME1-207ENST00000489212 GNG5P63218 68 aa14.81□□□□□ -0.04
LIME1-207ENST00000489212 RNF212Q495C1 297 aa14.81□□□□□ -0.04
LIME1-207ENST00000489212 FAM74A1Q5RGS3 127 aa14.81□□□□□ -0.04
LIME1-207ENST00000489212 GOLT1AQ6ZVE7 132 aa14.81□□□□□ -0.04
LIME1-207ENST00000489212 BORCS7-ASMTA0A0B4J1R7 106 aa14.8□□□□□ -0.04
LIME1-207ENST00000489212 NUDT3O95989 172 aa14.8□□□□□ -0.04
LIME1-207ENST00000489212 TCL1AP56279 114 aa14.8□□□□□ -0.04
LIME1-207ENST00000489212 TMED6Q8WW62 240 aa14.8□□□□□ -0.04
LIME1-207ENST00000489212 GNPNAT1Q96EK6 184 aaPredicted RBP14.8□□□□□ -0.04
LIME1-207ENST00000489212 TMPRSS5Q9H3S3 457 aa14.8□□□□□ -0.04
LIME1-207ENST00000489212 LENEPQ9Y5L5 61 aa14.8□□□□□ -0.04
LIME1-207ENST00000489212 TRAV8-1A0A0A6YYK1 113 aa14.79□□□□□ -0.04
LIME1-207ENST00000489212 M0R2N4 97 aa14.79□□□□□ -0.04
LIME1-207ENST00000489212 ARPC5O15511 151 aa14.79□□□□□ -0.04
LIME1-207ENST00000489212 OR5I1Q13606 314 aa14.79□□□□□ -0.04
LIME1-207ENST00000489212 Q6AWC8 147 aa14.79□□□□□ -0.04
LIME1-207ENST00000489212 ARL6IP6Q8N6S5 226 aa14.79□□□□□ -0.04
LIME1-207ENST00000489212 ACTR3CQ9C0K3 210 aaPredicted RBP14.79□□□□□ -0.04
LIME1-207ENST00000489212 MUC4Q99102 2169 aa14.78□□□□□ -0.04
LIME1-207ENST00000489212 SPINK4O60575 86 aa14.78□□□□□ -0.04
LIME1-207ENST00000489212 ZNF726P1Q15940 193 aa14.78□□□□□ -0.04
LIME1-207ENST00000489212 MUC21Q5SSG8 566 aa14.78□□□□□ -0.04
LIME1-207ENST00000489212 IBA57Q5T440 356 aaKnown RBP14.78□□□□□ -0.04
LIME1-207ENST00000489212 TVP23CQ96ET8 276 aa14.78□□□□□ -0.04
LIME1-207ENST00000489212 ST6GAL2Q96JF0 529 aa14.78□□□□□ -0.04
LIME1-207ENST00000489212 CYTL1Q9NRR1 136 aa14.78□□□□□ -0.04
LIME1-207ENST00000489212 IGLV2-18A0A075B6J9 118 aa14.77□□□□□ -0.05
LIME1-207ENST00000489212 TRAV26-1A0A087WT03 109 aa14.77□□□□□ -0.05
LIME1-207ENST00000489212 TRGV1A0A0A0MS02 117 aa14.77□□□□□ -0.05
LIME1-207ENST00000489212 ARPC5LQ9BPX5 153 aa14.77□□□□□ -0.05
LIME1-207ENST00000489212 A0A0J9YY99 117 aa14.76□□□□□ -0.05
LIME1-207ENST00000489212 CXorf1O96002 111 aa14.76□□□□□ -0.05
LIME1-207ENST00000489212 SGK494Q96LW2 274 aa14.76□□□□□ -0.05
LIME1-207ENST00000489212 C18orf15Q96N68 181 aa14.76□□□□□ -0.05
LIME1-207ENST00000489212 TRGV2A0A075B6R0 118 aa14.75□□□□□ -0.05
LIME1-207ENST00000489212 GGTLC3B5MD39 225 aa14.75□□□□□ -0.05
LIME1-207ENST00000489212 LGALS9BQ3B8N2 356 aa14.75□□□□□ -0.05
LIME1-207ENST00000489212 Q6ZR54 194 aa14.75□□□□□ -0.05
LIME1-207ENST00000489212 TMEM167BQ9NRX6 74 aa14.75□□□□□ -0.05
LIME1-207ENST00000489212 MDFICQ9P1T7 246 aa14.75□□□□□ -0.05
LIME1-207ENST00000489212 F6UZH7 168 aa14.74□□□□□ -0.05
LIME1-207ENST00000489212 TAAR5O14804 337 aa14.74□□□□□ -0.05
LIME1-207ENST00000489212 TCRAP04437 139 aa14.74□□□□□ -0.05
LIME1-207ENST00000489212 C5orf17Q8NAS9 161 aa14.74□□□□□ -0.05
LIME1-207ENST00000489212 ATG101Q9BSB4 218 aa14.74□□□□□ -0.05
LIME1-207ENST00000489212 MRPL16Q9NX20 251 aaKnown RBP14.74□□□□□ -0.05
LIME1-207ENST00000489212 CTXND1A0A1B0GTU2 59 aa14.73□□□□□ -0.05
LIME1-207ENST00000489212 SUMO1P63165 101 aaKnown RBP14.73□□□□□ -0.05
LIME1-207ENST00000489212 ZNF415Q09FC8 603 aa14.73□□□□□ -0.05
LIME1-207ENST00000489212 OR11H4Q8NGC9 324 aa14.73□□□□□ -0.05
LIME1-207ENST00000489212 TREM1Q9NP99 234 aa14.73□□□□□ -0.05
LIME1-207ENST00000489212 LINC00588Q9Y4M8 146 aa14.73□□□□□ -0.05
LIME1-207ENST00000489212 FAM3BP58499 235 aaPredicted RBP14.72□□□□□ -0.05
LIME1-207ENST00000489212 TMEM183BQ1AE95 376 aa14.72□□□□□ -0.05
LIME1-207ENST00000489212 IQCF2Q8IXL9 164 aa14.72□□□□□ -0.05
LIME1-207ENST00000489212 TMEM183AQ8IXX5 376 aa14.72□□□□□ -0.05
LIME1-207ENST00000489212 SERTM2A0A1B0GWG4 89 aa14.71□□□□□ -0.05
LIME1-207ENST00000489212 RTL8CO15255 209 aa14.71□□□□□ -0.05
LIME1-207ENST00000489212 IGLV2-11P01706 119 aa14.71□□□□□ -0.05
LIME1-207ENST00000489212 TDRG1Q3Y452 100 aa14.71□□□□□ -0.05
LIME1-207ENST00000489212 AKR1C8PQ5T2L2 129 aa14.71□□□□□ -0.05
LIME1-207ENST00000489212 FAM159AQ6UWV7 190 aa14.71□□□□□ -0.05
LIME1-207ENST00000489212 KCNRGQ8N5I3 272 aa14.71□□□□□ -0.05
LIME1-207ENST00000489212 ZNRF2Q8NHG8 242 aa14.71□□□□□ -0.05
LIME1-207ENST00000489212 VSIG2Q96IQ7 327 aa14.71□□□□□ -0.05
LIME1-207ENST00000489212 NAGKQ9UJ70 344 aa14.71□□□□□ -0.05
LIME1-207ENST00000489212 EPDR1Q9UM22 224 aa14.71□□□□□ -0.05
LIME1-207ENST00000489212 IGHV3-53P01767 116 aa14.7□□□□□ -0.06
LIME1-207ENST00000489212 FGF8P55075 233 aaPredicted RBP14.7□□□□□ -0.06
LIME1-207ENST00000489212 PSG8Q9UQ74 426 aa14.7□□□□□ -0.06
LIME1-207ENST00000489212 TRAV21A0A0B4J279 112 aa14.69□□□□□ -0.06
LIME1-207ENST00000489212 A0A1W2PRE2 83 aa14.69□□□□□ -0.06
LIME1-207ENST00000489212 H3BNG1 76 aa14.69□□□□□ -0.06
LIME1-207ENST00000489212 GNRH2O43555 120 aa14.69□□□□□ -0.06
LIME1-207ENST00000489212 CCL18P55774 89 aa14.69□□□□□ -0.06
LIME1-207ENST00000489212 ZNF345Q14585 488 aa14.69□□□□□ -0.06
LIME1-207ENST00000489212 C8orf49Q96NF6 230 aa14.69□□□□□ -0.06
LIME1-207ENST00000489212 PKD1P98161 4303 aa14.69□□□□□ -0.06
LIME1-207ENST00000489212 PKHD1P08F94 4074 aa14.68□□□□□ -0.06
LIME1-207ENST00000489212 TRGV11A0A075B6L2 103 aa14.68□□□□□ -0.06
LIME1-207ENST00000489212 ZNF80P51504 273 aaPredicted RBP14.68□□□□□ -0.06
LIME1-207ENST00000489212 UBE2G2P60604 165 aa14.68□□□□□ -0.06
LIME1-207ENST00000489212 LINC00336Q6ZUF6 198 aa14.68□□□□□ -0.06
LIME1-207ENST00000489212 CYB561D1Q8N8Q1 229 aa14.68□□□□□ -0.06
LIME1-207ENST00000489212 HMSDA8MTL9 139 aa14.67□□□□□ -0.06
LIME1-207ENST00000489212 FLI1Q01543 452 aaPredicted RBP14.67□□□□□ -0.06
LIME1-207ENST00000489212 A0A096LPF7 62 aa14.66□□□□□ -0.06
LIME1-207ENST00000489212 IGHV3-16A0A0C4DH30 117 aa14.66□□□□□ -0.06
LIME1-207ENST00000489212 K7EQM0 130 aa14.66□□□□□ -0.06
LIME1-207ENST00000489212 TYMSP04818 313 aa14.66□□□□□ -0.06
LIME1-207ENST00000489212 FHITP49789 147 aa14.66□□□□□ -0.06
LIME1-207ENST00000489212 ESRGQ1W209 222 aa14.66□□□□□ -0.06
LIME1-207ENST00000489212 PRNTQ86SH4 94 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms