RNA–Protein interactions for RNA: ENST00000488958.5

PHF11-215, Transcript of PHD finger protein 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHF11, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-215ENST00000488958 PCDH15Q96QU1 1955 aa2.06□□□□□ -2.08
PHF11-215ENST00000488958 FAM236AA0A1B0GUQ0 79 aa2.06□□□□□ -2.08
PHF11-215ENST00000488958 FAM236BA0A1B0GV22 79 aa2.06□□□□□ -2.08
PHF11-215ENST00000488958 B4DSR2 109 aa2.06□□□□□ -2.08
PHF11-215ENST00000488958 EDF1O60869 148 aaKnown RBP2.06□□□□□ -2.08
PHF11-215ENST00000488958 HYPMO75409 117 aa2.06□□□□□ -2.08
PHF11-215ENST00000488958 CD2P06729 351 aa2.06□□□□□ -2.08
PHF11-215ENST00000488958 DEFB113Q30KQ7 82 aa2.06□□□□□ -2.08
PHF11-215ENST00000488958 DNAJC15Q9Y5T4 150 aa2.06□□□□□ -2.08
PHF11-215ENST00000488958 FANCMQ8IYD8 2048 aa2.05□□□□□ -2.08
PHF11-215ENST00000488958 TMEM2Q9UHN6 1383 aa2.05□□□□□ -2.08
PHF11-215ENST00000488958 HEATR5BQ9P2D3 2071 aa2.05□□□□□ -2.08
PHF11-215ENST00000488958 TRBV6-5A0A0K0K1A5 114 aa2.05□□□□□ -2.08
PHF11-215ENST00000488958 PRB1P04280 392 aa2.05□□□□□ -2.08
PHF11-215ENST00000488958 RNASE3P12724 160 aaKnown RBP2.05□□□□□ -2.08
PHF11-215ENST00000488958 ZNF25P17030 456 aaPredicted RBP2.05□□□□□ -2.08
PHF11-215ENST00000488958 FGF7P21781 194 aa2.05□□□□□ -2.08
PHF11-215ENST00000488958 C1orf137Q5JT78 98 aa2.05□□□□□ -2.08
PHF11-215ENST00000488958 TEX261Q6UWH6 196 aa2.05□□□□□ -2.08
PHF11-215ENST00000488958 Q8N2B8 174 aa2.05□□□□□ -2.08
PHF11-215ENST00000488958 OR10AG1Q8NH19 301 aa2.05□□□□□ -2.08
PHF11-215ENST00000488958 OTOSQ8NHW6 89 aa2.05□□□□□ -2.08
PHF11-215ENST00000488958 POLEQ07864 2286 aa2.05□□□□□ -2.08
PHF11-215ENST00000488958 PTPRGP23470 1445 aa2.05□□□□□ -2.08
PHF11-215ENST00000488958 COL4A1P02462 1669 aa2.04□□□□□ -2.08
PHF11-215ENST00000488958 CR1P17927 2039 aa2.04□□□□□ -2.08
PHF11-215ENST00000488958 CDK5RAP2Q96SN8 1893 aa2.04□□□□□ -2.08
PHF11-215ENST00000488958 C5orf67F2Z3F1 127 aa2.04□□□□□ -2.08
PHF11-215ENST00000488958 F6UZH7 168 aa2.04□□□□□ -2.08
PHF11-215ENST00000488958 F8W1H4 67 aa2.04□□□□□ -2.08
PHF11-215ENST00000488958 CD3DP04234 171 aa2.04□□□□□ -2.08
PHF11-215ENST00000488958 CD14P08571 375 aa2.04□□□□□ -2.08
PHF11-215ENST00000488958 C3orf62Q6ZUJ4 267 aa2.04□□□□□ -2.08
PHF11-215ENST00000488958 C15orf53Q8NAA6 179 aa2.04□□□□□ -2.08
PHF11-215ENST00000488958 ATP6V0E2Q8NHE4 81 aa2.04□□□□□ -2.08
PHF11-215ENST00000488958 SPANXDQ9BXN6 97 aa2.04□□□□□ -2.08
PHF11-215ENST00000488958 ORMDL1Q9P0S3 153 aa2.04□□□□□ -2.08
PHF11-215ENST00000488958 KLK9Q9UKQ9 250 aa2.04□□□□□ -2.08
PHF11-215ENST00000488958 COL1A1P02452 1464 aaPredicted RBP2.04□□□□□ -2.08
PHF11-215ENST00000488958 GRIN2AQ12879 1464 aa2.04□□□□□ -2.08
PHF11-215ENST00000488958 RP1P56715 2156 aa2.04□□□□□ -2.08
PHF11-215ENST00000488958 FREM1Q5H8C1 2179 aa2.04□□□□□ -2.08
PHF11-215ENST00000488958 EIF4G3O43432 1585 aaKnown RBP2.03□□□□□ -2.08
PHF11-215ENST00000488958 AKAIN1P0CW23 69 aa2.03□□□□□ -2.08
PHF11-215ENST00000488958 ATP11AUNQ6ZP68 121 aa2.03□□□□□ -2.08
PHF11-215ENST00000488958 IDO2Q6ZQW0 420 aa2.03□□□□□ -2.08
PHF11-215ENST00000488958 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.03□□□□□ -2.08
PHF11-215ENST00000488958 TAS2R8Q9NYW2 309 aa2.03□□□□□ -2.08
PHF11-215ENST00000488958 NOP16Q9Y3C1 178 aaKnown RBP2.03□□□□□ -2.08
PHF11-215ENST00000488958 RTTNQ86VV8 2226 aa2.03□□□□□ -2.08
PHF11-215ENST00000488958 FAM135AQ9P2D6 1515 aa2.03□□□□□ -2.08
PHF11-215ENST00000488958 FRMPD1Q5SYB0 1578 aa2.03□□□□□ -2.09
PHF11-215ENST00000488958 TRGV2A0A075B6R0 118 aa2.02□□□□□ -2.09
PHF11-215ENST00000488958 TRBV6-8A0A0A6YYG3 113 aa2.02□□□□□ -2.09
PHF11-215ENST00000488958 C9orf170A2RU37 121 aa2.02□□□□□ -2.09
PHF11-215ENST00000488958 H3BRM9 83 aa2.02□□□□□ -2.09
PHF11-215ENST00000488958 J3QLW9 94 aa2.02□□□□□ -2.09
PHF11-215ENST00000488958 M0R2P5 195 aa2.02□□□□□ -2.09
PHF11-215ENST00000488958 IGF2P01344 180 aa2.02□□□□□ -2.09
PHF11-215ENST00000488958 COX7CP15954 63 aa2.02□□□□□ -2.09
PHF11-215ENST00000488958 MEIG1Q5JSS6 88 aa2.02□□□□□ -2.09
PHF11-215ENST00000488958 C10orf55Q5SWW7 151 aa2.02□□□□□ -2.09
PHF11-215ENST00000488958 ZNF833PQ6ZTB9 187 aa2.02□□□□□ -2.09
PHF11-215ENST00000488958 SNX29P2Q8IUI4 249 aa2.02□□□□□ -2.09
PHF11-215ENST00000488958 LINC00269Q8N2A0 174 aa2.02□□□□□ -2.09
PHF11-215ENST00000488958 LSM2Q9Y333 95 aaKnown RBP2.02□□□□□ -2.09
PHF11-215ENST00000488958 SYNJ1O43426 1573 aa2.02□□□□□ -2.09
PHF11-215ENST00000488958 ARHGAP31Q2M1Z3 1444 aa2.01□□□□□ -2.09
PHF11-215ENST00000488958 UHRF1BP1LA0JNW5 1464 aa2.01□□□□□ -2.09
PHF11-215ENST00000488958 LAMB2P55268 1798 aa2.01□□□□□ -2.09
PHF11-215ENST00000488958 PIGBOS1A0A0B4J2F0 54 aa2.01□□□□□ -2.09
PHF11-215ENST00000488958 C20orf202A1L168 122 aa2.01□□□□□ -2.09
PHF11-215ENST00000488958 MIR22HGQ0VDD5 57 aa2.01□□□□□ -2.09
PHF11-215ENST00000488958 OCIAD2Q56VL3 154 aa2.01□□□□□ -2.09
PHF11-215ENST00000488958 FOXI2Q6ZQN5 318 aa2.01□□□□□ -2.09
PHF11-215ENST00000488958 C5orf17Q8NAS9 161 aa2.01□□□□□ -2.09
PHF11-215ENST00000488958 PLPP5Q8NEB5 264 aa2.01□□□□□ -2.09
PHF11-215ENST00000488958 ZNF563Q8TA94 476 aa2.01□□□□□ -2.09
PHF11-215ENST00000488958 C12orf57Q99622 126 aa2.01□□□□□ -2.09
PHF11-215ENST00000488958 SNRNP25Q9BV90 132 aaKnown RBP2.01□□□□□ -2.09
PHF11-215ENST00000488958 SNURFQ9Y675 71 aa2.01□□□□□ -2.09
PHF11-215ENST00000488958 CHCHD2Q9Y6H1 151 aaPredicted RBP2.01□□□□□ -2.09
PHF11-215ENST00000488958 DIDO1Q9BTC0 2240 aaKnown RBP2.01□□□□□ -2.09
PHF11-215ENST00000488958 ZFC3H1O60293 1989 aaKnown RBP2.01□□□□□ -2.09
PHF11-215ENST00000488958 TANC2Q9HCD6 1990 aa2.01□□□□□ -2.09
PHF11-215ENST00000488958 TRAV12-2A0A075B6T6 113 aa2□□□□□ -2.09
PHF11-215ENST00000488958 TRAV2A0A0B4J234 112 aa2□□□□□ -2.09
PHF11-215ENST00000488958 ATP6V1G2-DDX39BF2Z307 99 aa2□□□□□ -2.09
PHF11-215ENST00000488958 CORTO00230 105 aa2□□□□□ -2.09
PHF11-215ENST00000488958 GEMIN2O14893 280 aaKnown RBP2□□□□□ -2.09
PHF11-215ENST00000488958 SNAPC5O75971 98 aa2□□□□□ -2.09
PHF11-215ENST00000488958 SDF2Q99470 211 aa2□□□□□ -2.09
PHF11-215ENST00000488958 NAA60Q9H7X0 242 aa2□□□□□ -2.09
PHF11-215ENST00000488958 SCN3AQ9NY46 2000 aa1.99□□□□□ -2.09
PHF11-215ENST00000488958 CCL16O15467 120 aa1.99□□□□□ -2.09
PHF11-215ENST00000488958 GNG4P50150 75 aa1.99□□□□□ -2.09
PHF11-215ENST00000488958 CNBPP62633 177 aaKnown RBP1.99□□□□□ -2.09
PHF11-215ENST00000488958 Q6ZUT4 128 aa1.99□□□□□ -2.09
PHF11-215ENST00000488958 Q8TAT8 98 aa1.99□□□□□ -2.09
PHF11-215ENST00000488958 PP6455Q8WZ26 134 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms