RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 CRISP2P16562 243 aa9.7□□□□□ -0.86
SPTLC1-207ENST00000488921 UBE2L3P68036 154 aaKnown RBP9.7□□□□□ -0.86
SPTLC1-207ENST00000488921 TMED6Q8WW62 240 aa9.7□□□□□ -0.86
SPTLC1-207ENST00000488921 PHYHIPLQ96FC7 376 aa9.7□□□□□ -0.86
SPTLC1-207ENST00000488921 LINC00467Q9BRT7 94 aa9.7□□□□□ -0.86
SPTLC1-207ENST00000488921 ACTR3CQ9C0K3 210 aaPredicted RBP9.7□□□□□ -0.86
SPTLC1-207ENST00000488921 IGLV2-18A0A075B6J9 118 aa9.69□□□□□ -0.86
SPTLC1-207ENST00000488921 TRBV7-9A0A0J9YWB2 115 aa9.69□□□□□ -0.86
SPTLC1-207ENST00000488921 RAB5CP51148 216 aa9.69□□□□□ -0.86
SPTLC1-207ENST00000488921 CCL18P55774 89 aa9.69□□□□□ -0.86
SPTLC1-207ENST00000488921 DAZ2Q13117 558 aaKnown RBP9.69□□□□□ -0.86
SPTLC1-207ENST00000488921 BTN1A1Q13410 526 aa9.69□□□□□ -0.86
SPTLC1-207ENST00000488921 SOHLH1Q5JUK2 328 aa9.69□□□□□ -0.86
SPTLC1-207ENST00000488921 EIF4E3Q8N5X7 224 aaKnown RBP9.69□□□□□ -0.86
SPTLC1-207ENST00000488921 ZNF492Q9P255 531 aa9.69□□□□□ -0.86
SPTLC1-207ENST00000488921 GAGE12BA1L429 117 aa9.68□□□□□ -0.86
SPTLC1-207ENST00000488921 RBAKDNA6NC62 111 aa9.68□□□□□ -0.86
SPTLC1-207ENST00000488921 ZNF324O75467 553 aaPredicted RBP9.68□□□□□ -0.86
SPTLC1-207ENST00000488921 GAGE7O76087 117 aa9.68□□□□□ -0.86
SPTLC1-207ENST00000488921 GAGE12FP0CL80 117 aa9.68□□□□□ -0.86
SPTLC1-207ENST00000488921 GAGE12GP0CL81 117 aa9.68□□□□□ -0.86
SPTLC1-207ENST00000488921 GAGE12IP0CL82 117 aa9.68□□□□□ -0.86
SPTLC1-207ENST00000488921 RNASE4P34096 147 aaKnown RBP9.68□□□□□ -0.86
SPTLC1-207ENST00000488921 ZNF138P52744 262 aa9.68□□□□□ -0.86
SPTLC1-207ENST00000488921 RAB2AP61019 212 aa9.68□□□□□ -0.86
SPTLC1-207ENST00000488921 ANXA2RQ3ZCQ2 193 aa9.68□□□□□ -0.86
SPTLC1-207ENST00000488921 DPPA3Q6W0C5 159 aa9.68□□□□□ -0.86
SPTLC1-207ENST00000488921 Q6ZR54 194 aa9.68□□□□□ -0.86
SPTLC1-207ENST00000488921 Q9H3A6 140 aa9.68□□□□□ -0.86
SPTLC1-207ENST00000488921 DNAH17Q9UFH2 4485 aa9.68□□□□□ -0.86
SPTLC1-207ENST00000488921 PRSS29PA6NIE9 313 aa9.67□□□□□ -0.86
SPTLC1-207ENST00000488921 CDC34P49427 236 aaPredicted RBP9.67□□□□□ -0.86
SPTLC1-207ENST00000488921 RANP62826 216 aaKnown RBP9.67□□□□□ -0.86
SPTLC1-207ENST00000488921 OR5I1Q13606 314 aa9.67□□□□□ -0.86
SPTLC1-207ENST00000488921 FAM74A1Q5RGS3 127 aa9.67□□□□□ -0.86
SPTLC1-207ENST00000488921 IBA57Q5T440 356 aaKnown RBP9.67□□□□□ -0.86
SPTLC1-207ENST00000488921 RXFP4Q8TDU9 374 aa9.67□□□□□ -0.86
SPTLC1-207ENST00000488921 ZNF503Q96F45 646 aa9.67□□□□□ -0.86
SPTLC1-207ENST00000488921 VGLL1Q99990 258 aa9.67□□□□□ -0.86
SPTLC1-207ENST00000488921 H3BNG1 76 aa9.66□□□□□ -0.86
SPTLC1-207ENST00000488921 TEX46H3BTG2 121 aa9.66□□□□□ -0.86
SPTLC1-207ENST00000488921 RGS13O14921 159 aa9.66□□□□□ -0.86
SPTLC1-207ENST00000488921 RTL8CO15255 209 aa9.66□□□□□ -0.86
SPTLC1-207ENST00000488921 IFNA7P01567 189 aa9.66□□□□□ -0.86
SPTLC1-207ENST00000488921 PQLC2Q6ZP29 291 aa9.66□□□□□ -0.86
SPTLC1-207ENST00000488921 ZFAND2AQ8N6M9 145 aa9.66□□□□□ -0.86
SPTLC1-207ENST00000488921 C11orf72Q8NBR9 251 aa9.66□□□□□ -0.86
SPTLC1-207ENST00000488921 FAM213BQ8TBF2 198 aa9.66□□□□□ -0.86
SPTLC1-207ENST00000488921 C18orf15Q96N68 181 aa9.66□□□□□ -0.86
SPTLC1-207ENST00000488921 GSN-AS1Q9NRJ2 163 aa9.66□□□□□ -0.86
SPTLC1-207ENST00000488921 LENEPQ9Y5L5 61 aa9.66□□□□□ -0.86
SPTLC1-207ENST00000488921 TRGV2A0A075B6R0 118 aa9.65□□□□□ -0.86
SPTLC1-207ENST00000488921 IGHV1OR15-1A0A075B7D0 117 aa9.65□□□□□ -0.86
SPTLC1-207ENST00000488921 TRAV26-1A0A087WT03 109 aa9.65□□□□□ -0.86
SPTLC1-207ENST00000488921 CTXND1A0A1B0GTU2 59 aa9.65□□□□□ -0.86
SPTLC1-207ENST00000488921 SULT1A2P50226 295 aa9.65□□□□□ -0.86
SPTLC1-207ENST00000488921 TCL1AP56279 114 aa9.65□□□□□ -0.86
SPTLC1-207ENST00000488921 ALKAL2Q6UX46 152 aa9.65□□□□□ -0.86
SPTLC1-207ENST00000488921 Q6ZTI0 123 aa9.65□□□□□ -0.86
SPTLC1-207ENST00000488921 Q8TAT8 98 aa9.65□□□□□ -0.86
SPTLC1-207ENST00000488921 RAB24Q969Q5 203 aa9.65□□□□□ -0.86
SPTLC1-207ENST00000488921 TMPRSS5Q9H3S3 457 aa9.65□□□□□ -0.86
SPTLC1-207ENST00000488921 OTORQ9NRC9 128 aa9.65□□□□□ -0.86
SPTLC1-207ENST00000488921 TRGV1A0A0A0MS02 117 aa9.64□□□□□ -0.87
SPTLC1-207ENST00000488921 CXorf1O96002 111 aa9.64□□□□□ -0.87
SPTLC1-207ENST00000488921 ZNF415Q09FC8 603 aa9.64□□□□□ -0.87
SPTLC1-207ENST00000488921 PRR9Q5T870 116 aa9.64□□□□□ -0.87
SPTLC1-207ENST00000488921 C1orf134Q5TEV5 83 aa9.64□□□□□ -0.87
SPTLC1-207ENST00000488921 TEX261Q6UWH6 196 aa9.64□□□□□ -0.87
SPTLC1-207ENST00000488921 IQCF2Q8IXL9 164 aa9.64□□□□□ -0.87
SPTLC1-207ENST00000488921 ARL6IP6Q8N6S5 226 aa9.64□□□□□ -0.87
SPTLC1-207ENST00000488921 ZNRF2Q8NHG8 242 aa9.64□□□□□ -0.87
SPTLC1-207ENST00000488921 CMTM2Q8TAZ6 248 aa9.64□□□□□ -0.87
SPTLC1-207ENST00000488921 A0A1B0GVY2 172 aa9.63□□□□□ -0.87
SPTLC1-207ENST00000488921 DIRC3C9JPN6 131 aa9.63□□□□□ -0.87
SPTLC1-207ENST00000488921 HMGB3O15347 200 aaKnown RBP9.63□□□□□ -0.87
SPTLC1-207ENST00000488921 SPINK4O60575 86 aa9.63□□□□□ -0.87
SPTLC1-207ENST00000488921 H2AFB1P0C5Y9 115 aa9.63□□□□□ -0.87
SPTLC1-207ENST00000488921 HOXA5P20719 270 aa9.63□□□□□ -0.87
SPTLC1-207ENST00000488921 BLOC1S1P78537 153 aa9.63□□□□□ -0.87
SPTLC1-207ENST00000488921 SSX7Q7RTT5 188 aa9.63□□□□□ -0.87
SPTLC1-207ENST00000488921 SFT2D1Q8WV19 159 aa9.63□□□□□ -0.87
SPTLC1-207ENST00000488921 LINC00588Q9Y4M8 146 aa9.63□□□□□ -0.87
SPTLC1-207ENST00000488921 PKHD1P08F94 4074 aa9.62□□□□□ -0.87
SPTLC1-207ENST00000488921 A0A0J9YY99 117 aa9.62□□□□□ -0.87
SPTLC1-207ENST00000488921 NBDYA0A0U1RRE5 68 aa9.62□□□□□ -0.87
SPTLC1-207ENST00000488921 MAP1LC3B2A6NCE7 125 aa9.62□□□□□ -0.87
SPTLC1-207ENST00000488921 STAG3L2P0CL84 134 aa9.62□□□□□ -0.87
SPTLC1-207ENST00000488921 STAG3L3P0CL85 134 aa9.62□□□□□ -0.87
SPTLC1-207ENST00000488921 MAP1LC3BQ9GZQ8 125 aa9.62□□□□□ -0.87
SPTLC1-207ENST00000488921 KLF12Q9Y4X4 402 aa9.62□□□□□ -0.87
SPTLC1-207ENST00000488921 PKD1P98161 4303 aa9.61□□□□□ -0.87
SPTLC1-207ENST00000488921 PGPA6NDG6 321 aa9.61□□□□□ -0.87
SPTLC1-207ENST00000488921 ARL14EPLP0DKL9 152 aa9.61□□□□□ -0.87
SPTLC1-207ENST00000488921 FHITP49789 147 aa9.61□□□□□ -0.87
SPTLC1-207ENST00000488921 RAB14P61106 215 aa9.61□□□□□ -0.87
SPTLC1-207ENST00000488921 Q6AWC8 147 aa9.61□□□□□ -0.87
SPTLC1-207ENST00000488921 MBD3L1Q8WWY6 194 aa9.61□□□□□ -0.87
SPTLC1-207ENST00000488921 TMEM167BQ9NRX6 74 aa9.61□□□□□ -0.87
SPTLC1-207ENST00000488921 RPH3ALQ9UNE2 315 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms