RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 STX12Q86Y82 276 aa12.86□□□□□ -0.35
GGPS1-206ENST00000488594 NTN5Q8WTR8 489 aaPredicted RBP12.86□□□□□ -0.35
GGPS1-206ENST00000488594 TXNDC17Q9BRA2 123 aa12.86□□□□□ -0.35
GGPS1-206ENST00000488594 GPN1Q9HCN4 374 aaPredicted RBP12.86□□□□□ -0.35
GGPS1-206ENST00000488594 LYRM2Q9NU23 88 aaPredicted RBP12.86□□□□□ -0.35
GGPS1-206ENST00000488594 IGLV5-52A0A0A0MRZ9 124 aa12.85□□□□□ -0.35
GGPS1-206ENST00000488594 CRYGDP07320 174 aa12.85□□□□□ -0.35
GGPS1-206ENST00000488594 GYPEP15421 78 aa12.85□□□□□ -0.35
GGPS1-206ENST00000488594 FGF7P21781 194 aa12.85□□□□□ -0.35
GGPS1-206ENST00000488594 ZNF138P52744 262 aa12.85□□□□□ -0.35
GGPS1-206ENST00000488594 Q6ZQT7 251 aa12.85□□□□□ -0.35
GGPS1-206ENST00000488594 OR10G4Q8NGN3 311 aa12.85□□□□□ -0.35
GGPS1-206ENST00000488594 RASL10AQ92737 203 aa12.85□□□□□ -0.35
GGPS1-206ENST00000488594 C5orf51A6NDU8 294 aa12.84□□□□□ -0.35
GGPS1-206ENST00000488594 C9JCJ5 164 aa12.84□□□□□ -0.35
GGPS1-206ENST00000488594 ATP6V1FQ16864 119 aa12.84□□□□□ -0.35
GGPS1-206ENST00000488594 TMEM252Q8N6L7 170 aa12.84□□□□□ -0.35
GGPS1-206ENST00000488594 SLC25A2Q9BXI2 301 aa12.84□□□□□ -0.35
GGPS1-206ENST00000488594 MYCBP2O75592 4640 aa12.84□□□□□ -0.35
GGPS1-206ENST00000488594 PSCAO43653 123 aa12.83□□□□□ -0.36
GGPS1-206ENST00000488594 NBEAP1P0C6P0 100 aa12.83□□□□□ -0.36
GGPS1-206ENST00000488594 SFTA3P0C7M3 94 aa12.83□□□□□ -0.36
GGPS1-206ENST00000488594 SH2D6Q7Z4S9 175 aa12.83□□□□□ -0.36
GGPS1-206ENST00000488594 ZNF479Q96JC4 524 aa12.83□□□□□ -0.36
GGPS1-206ENST00000488594 C2orf50Q96LR7 162 aa12.83□□□□□ -0.36
GGPS1-206ENST00000488594 SPXQ9BT56 116 aa12.83□□□□□ -0.36
GGPS1-206ENST00000488594 ZNF266Q14584 549 aa12.82□□□□□ -0.36
GGPS1-206ENST00000488594 NPCDR1Q9BY65 106 aa12.82□□□□□ -0.36
GGPS1-206ENST00000488594 SRRM2Q9UQ35 2752 aaKnown RBP12.82□□□□□ -0.36
GGPS1-206ENST00000488594 IGSF23A1L1A6 192 aa12.81□□□□□ -0.36
GGPS1-206ENST00000488594 RBAKDNA6NC62 111 aa12.81□□□□□ -0.36
GGPS1-206ENST00000488594 S100A10P60903 97 aa12.81□□□□□ -0.36
GGPS1-206ENST00000488594 GCSAMLQ5JQS6 135 aa12.81□□□□□ -0.36
GGPS1-206ENST00000488594 MUC21Q5SSG8 566 aa12.81□□□□□ -0.36
GGPS1-206ENST00000488594 Q8TAT8 98 aa12.81□□□□□ -0.36
GGPS1-206ENST00000488594 FAM167A-AS1Q96KT0 104 aa12.81□□□□□ -0.36
GGPS1-206ENST00000488594 SDHCQ99643 169 aaPredicted RBP12.81□□□□□ -0.36
GGPS1-206ENST00000488594 OR51M1Q9H341 326 aa12.81□□□□□ -0.36
GGPS1-206ENST00000488594 TRGV11A0A075B6L2 103 aa12.81□□□□□ -0.36
GGPS1-206ENST00000488594 J3QL48 77 aa12.81□□□□□ -0.36
GGPS1-206ENST00000488594 IL7P13232 177 aa12.81□□□□□ -0.36
GGPS1-206ENST00000488594 CSN1S1P47710 185 aa12.81□□□□□ -0.36
GGPS1-206ENST00000488594 TIRAPP58753 221 aa12.81□□□□□ -0.36
GGPS1-206ENST00000488594 BOLA1Q9Y3E2 137 aa12.81□□□□□ -0.36
GGPS1-206ENST00000488594 TRAV4A0A0B4J268 109 aa12.8□□□□□ -0.36
GGPS1-206ENST00000488594 IGHV3-38A0A0C4DH36 116 aa12.8□□□□□ -0.36
GGPS1-206ENST00000488594 LRCOL1A6NCL2 159 aa12.8□□□□□ -0.36
GGPS1-206ENST00000488594 HAMPP81172 84 aa12.8□□□□□ -0.36
GGPS1-206ENST00000488594 FAM159AQ6UWV7 190 aa12.8□□□□□ -0.36
GGPS1-206ENST00000488594 MIR17HGQ75NE6 70 aa12.8□□□□□ -0.36
GGPS1-206ENST00000488594 SLC25A31Q9H0C2 315 aa12.8□□□□□ -0.36
GGPS1-206ENST00000488594 TMEM183BQ1AE95 376 aa12.79□□□□□ -0.36
GGPS1-206ENST00000488594 Q6AWC8 147 aa12.79□□□□□ -0.36
GGPS1-206ENST00000488594 TMEM183AQ8IXX5 376 aa12.79□□□□□ -0.36
GGPS1-206ENST00000488594 FXYD5Q96DB9 178 aa12.79□□□□□ -0.36
GGPS1-206ENST00000488594 PAXXQ9BUH6 204 aa12.79□□□□□ -0.36
GGPS1-206ENST00000488594 LENEPQ9Y5L5 61 aa12.79□□□□□ -0.36
GGPS1-206ENST00000488594 VPS13BQ7Z7G8 4022 aa12.79□□□□□ -0.36
GGPS1-206ENST00000488594 C1QBP02746 253 aa12.78□□□□□ -0.36
GGPS1-206ENST00000488594 IL15RAQ13261 267 aa12.78□□□□□ -0.36
GGPS1-206ENST00000488594 RAB32Q13637 225 aa12.78□□□□□ -0.36
GGPS1-206ENST00000488594 LINC01556Q5JQF7 62 aa12.78□□□□□ -0.36
GGPS1-206ENST00000488594 Q8N814 137 aa12.78□□□□□ -0.36
GGPS1-206ENST00000488594 OR4C5Q8NGB2 326 aa12.78□□□□□ -0.36
GGPS1-206ENST00000488594 RBM38Q9H0Z9 239 aaKnown RBP12.78□□□□□ -0.36
GGPS1-206ENST00000488594 KCNIP2Q9NS61 270 aa12.78□□□□□ -0.36
GGPS1-206ENST00000488594 IBA57-AS1B1ANH7 110 aa12.77□□□□□ -0.37
GGPS1-206ENST00000488594 TCRBP04435 133 aa12.77□□□□□ -0.37
GGPS1-206ENST00000488594 OR10J4P0C629 311 aa12.77□□□□□ -0.37
GGPS1-206ENST00000488594 PPT1P50897 306 aa12.77□□□□□ -0.37
GGPS1-206ENST00000488594 TDRG1Q3Y452 100 aa12.77□□□□□ -0.37
GGPS1-206ENST00000488594 PHYHIPLQ96FC7 376 aa12.77□□□□□ -0.37
GGPS1-206ENST00000488594 SEC22CQ9BRL7 303 aa12.77□□□□□ -0.37
GGPS1-206ENST00000488594 M0R2P5 195 aa12.76□□□□□ -0.37
GGPS1-206ENST00000488594 LYRM1O43325 122 aa12.76□□□□□ -0.37
GGPS1-206ENST00000488594 NHLRC2Q8NBF2 726 aa12.76□□□□□ -0.37
GGPS1-206ENST00000488594 THAP6Q8TBB0 222 aa12.76□□□□□ -0.37
GGPS1-206ENST00000488594 TRAV6A0A075B6T7 132 aa12.75□□□□□ -0.37
GGPS1-206ENST00000488594 TRAV8-6A0A0B4J262 113 aa12.75□□□□□ -0.37
GGPS1-206ENST00000488594 PLA2G10O15496 165 aa12.75□□□□□ -0.37
GGPS1-206ENST00000488594 RANP62826 216 aaKnown RBP12.75□□□□□ -0.37
GGPS1-206ENST00000488594 NUDT15Q9NV35 164 aa12.75□□□□□ -0.37
GGPS1-206ENST00000488594 OR7C2O60412 319 aa12.74□□□□□ -0.37
GGPS1-206ENST00000488594 PLA2G1BP04054 148 aaKnown RBP12.74□□□□□ -0.37
GGPS1-206ENST00000488594 OR5C1Q8NGR4 320 aa12.74□□□□□ -0.37
GGPS1-206ENST00000488594 TMED6Q8WW62 240 aa12.74□□□□□ -0.37
GGPS1-206ENST00000488594 LOC100131303A0A0U1RQF7 123 aa12.73□□□□□ -0.37
GGPS1-206ENST00000488594 PFN1P07737 140 aaKnown RBP12.73□□□□□ -0.37
GGPS1-206ENST00000488594 NAGKQ9UJ70 344 aa12.73□□□□□ -0.37
GGPS1-206ENST00000488594 DIRC3C9JPN6 131 aa12.72□□□□□ -0.37
GGPS1-206ENST00000488594 NHLH2Q02577 135 aa12.72□□□□□ -0.37
GGPS1-206ENST00000488594 Q9HAA7 133 aa12.72□□□□□ -0.37
GGPS1-206ENST00000488594 FAM30AQ9NZY2 134 aa12.72□□□□□ -0.37
GGPS1-206ENST00000488594 IGHV3-16A0A0C4DH30 117 aa12.71□□□□□ -0.37
GGPS1-206ENST00000488594 GATA1P15976 413 aaPredicted RBP12.71□□□□□ -0.37
GGPS1-206ENST00000488594 UBE2L3P68036 154 aaKnown RBP12.71□□□□□ -0.37
GGPS1-206ENST00000488594 WDR61Q9GZS3 305 aaKnown RBP12.71□□□□□ -0.37
GGPS1-206ENST00000488594 KRTAP29-1A8MX34 341 aaPredicted RBP12.7□□□□□ -0.38
GGPS1-206ENST00000488594 C17orf112F2Z3M2 114 aa12.7□□□□□ -0.38
GGPS1-206ENST00000488594 LAGE3Q14657 143 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms