RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 Q6ZR54 194 aa12.4□□□□□ -0.42
ITGB1-215ENST00000488494 LINC00336Q6ZUF6 198 aa12.4□□□□□ -0.42
ITGB1-215ENST00000488494 ARPC5LQ9BPX5 153 aa12.4□□□□□ -0.42
ITGB1-215ENST00000488494 PSMG3Q9BT73 122 aaPredicted RBP12.4□□□□□ -0.42
ITGB1-215ENST00000488494 KLF12Q9Y4X4 402 aa12.4□□□□□ -0.42
ITGB1-215ENST00000488494 NACAE9PAV3 2078 aa12.4□□□□□ -0.42
ITGB1-215ENST00000488494 A0A0J9YY99 117 aa12.39□□□□□ -0.43
ITGB1-215ENST00000488494 RNF222A6NCQ9 220 aa12.39□□□□□ -0.43
ITGB1-215ENST00000488494 PGPA6NDG6 321 aa12.39□□□□□ -0.43
ITGB1-215ENST00000488494 FAM74A1Q5RGS3 127 aa12.39□□□□□ -0.43
ITGB1-215ENST00000488494 IBA57Q5T440 356 aaKnown RBP12.39□□□□□ -0.43
ITGB1-215ENST00000488494 GOLT1AQ6ZVE7 132 aa12.39□□□□□ -0.43
ITGB1-215ENST00000488494 INO80EQ8NBZ0 244 aaPredicted RBP12.39□□□□□ -0.43
ITGB1-215ENST00000488494 OR2T35Q8NGX2 323 aa12.39□□□□□ -0.43
ITGB1-215ENST00000488494 GNPNAT1Q96EK6 184 aaPredicted RBP12.39□□□□□ -0.43
ITGB1-215ENST00000488494 DNAH17Q9UFH2 4485 aa12.39□□□□□ -0.43
ITGB1-215ENST00000488494 RTL8CO15255 209 aa12.38□□□□□ -0.43
ITGB1-215ENST00000488494 GNG5P63218 68 aa12.38□□□□□ -0.43
ITGB1-215ENST00000488494 MUC21Q5SSG8 566 aa12.38□□□□□ -0.43
ITGB1-215ENST00000488494 MRPL16Q9NX20 251 aaKnown RBP12.38□□□□□ -0.43
ITGB1-215ENST00000488494 TNFSF18Q9UNG2 199 aa12.38□□□□□ -0.43
ITGB1-215ENST00000488494 SPINK4O60575 86 aa12.37□□□□□ -0.43
ITGB1-215ENST00000488494 STAG3L2P0CL84 134 aa12.37□□□□□ -0.43
ITGB1-215ENST00000488494 STAG3L3P0CL85 134 aa12.37□□□□□ -0.43
ITGB1-215ENST00000488494 CCL18P55774 89 aa12.37□□□□□ -0.43
ITGB1-215ENST00000488494 ZNF415Q09FC8 603 aa12.37□□□□□ -0.43
ITGB1-215ENST00000488494 RPL7L1Q6DKI1 246 aaKnown RBP12.37□□□□□ -0.43
ITGB1-215ENST00000488494 TMED6Q8WW62 240 aa12.37□□□□□ -0.43
ITGB1-215ENST00000488494 RAB24Q969Q5 203 aa12.37□□□□□ -0.43
ITGB1-215ENST00000488494 LENEPQ9Y5L5 61 aa12.37□□□□□ -0.43
ITGB1-215ENST00000488494 TRAV8-1A0A0A6YYK1 113 aa12.36□□□□□ -0.43
ITGB1-215ENST00000488494 MBP02144 154 aa12.36□□□□□ -0.43
ITGB1-215ENST00000488494 GCHFRP30047 84 aa12.36□□□□□ -0.43
ITGB1-215ENST00000488494 SERF2P84101 59 aa12.36□□□□□ -0.43
ITGB1-215ENST00000488494 Q6AWC8 147 aa12.36□□□□□ -0.43
ITGB1-215ENST00000488494 ZNRF2Q8NHG8 242 aa12.36□□□□□ -0.43
ITGB1-215ENST00000488494 C18orf15Q96N68 181 aa12.36□□□□□ -0.43
ITGB1-215ENST00000488494 LINC00588Q9Y4M8 146 aa12.36□□□□□ -0.43
ITGB1-215ENST00000488494 BORCS7-ASMTA0A0B4J1R7 106 aa12.35□□□□□ -0.43
ITGB1-215ENST00000488494 PRSS29PA6NIE9 313 aa12.35□□□□□ -0.43
ITGB1-215ENST00000488494 F6UZH7 168 aa12.35□□□□□ -0.43
ITGB1-215ENST00000488494 G3V3Q6 166 aa12.35□□□□□ -0.43
ITGB1-215ENST00000488494 NAGKQ9UJ70 344 aa12.35□□□□□ -0.43
ITGB1-215ENST00000488494 HERC2O95714 4834 aa12.35□□□□□ -0.43
ITGB1-215ENST00000488494 IGHV3-53P01767 116 aa12.34□□□□□ -0.43
ITGB1-215ENST00000488494 TMEM183BQ1AE95 376 aa12.34□□□□□ -0.43
ITGB1-215ENST00000488494 SSX7Q7RTT5 188 aa12.34□□□□□ -0.43
ITGB1-215ENST00000488494 TMEM183AQ8IXX5 376 aa12.34□□□□□ -0.43
ITGB1-215ENST00000488494 ARL6IP6Q8N6S5 226 aa12.34□□□□□ -0.43
ITGB1-215ENST00000488494 ST6GAL2Q96JF0 529 aa12.34□□□□□ -0.43
ITGB1-215ENST00000488494 H3BNG1 76 aa12.33□□□□□ -0.44
ITGB1-215ENST00000488494 IQCF2Q8IXL9 164 aa12.33□□□□□ -0.44
ITGB1-215ENST00000488494 C5orf17Q8NAS9 161 aa12.33□□□□□ -0.44
ITGB1-215ENST00000488494 ACTR3CQ9C0K3 210 aaPredicted RBP12.33□□□□□ -0.44
ITGB1-215ENST00000488494 PKHD1P08F94 4074 aa12.33□□□□□ -0.44
ITGB1-215ENST00000488494 TRGV11A0A075B6L2 103 aa12.32□□□□□ -0.44
ITGB1-215ENST00000488494 NBDYA0A0U1RRE5 68 aa12.32□□□□□ -0.44
ITGB1-215ENST00000488494 A0A1B0GVY2 172 aa12.32□□□□□ -0.44
ITGB1-215ENST00000488494 GGTLC3B5MD39 225 aa12.32□□□□□ -0.44
ITGB1-215ENST00000488494 ARPC5O15511 151 aa12.32□□□□□ -0.44
ITGB1-215ENST00000488494 CXorf1O96002 111 aa12.32□□□□□ -0.44
ITGB1-215ENST00000488494 SOHLH1Q5JUK2 328 aa12.32□□□□□ -0.44
ITGB1-215ENST00000488494 C1orf134Q5TEV5 83 aa12.32□□□□□ -0.44
ITGB1-215ENST00000488494 FAM159AQ6UWV7 190 aa12.32□□□□□ -0.44
ITGB1-215ENST00000488494 SUN5Q8TC36 379 aa12.32□□□□□ -0.44
ITGB1-215ENST00000488494 TVP23CQ96ET8 276 aa12.32□□□□□ -0.44
ITGB1-215ENST00000488494 VSIG2Q96IQ7 327 aa12.32□□□□□ -0.44
ITGB1-215ENST00000488494 SGK494Q96LW2 274 aa12.32□□□□□ -0.44
ITGB1-215ENST00000488494 TREM1Q9NP99 234 aa12.32□□□□□ -0.44
ITGB1-215ENST00000488494 MDFICQ9P1T7 246 aa12.32□□□□□ -0.44
ITGB1-215ENST00000488494 TCRAP04437 139 aa12.31□□□□□ -0.44
ITGB1-215ENST00000488494 TMEM167BQ9NRX6 74 aa12.31□□□□□ -0.44
ITGB1-215ENST00000488494 KIAA1109Q2LD37 5005 aa12.3□□□□□ -0.44
ITGB1-215ENST00000488494 SERTM2A0A1B0GWG4 89 aa12.3□□□□□ -0.44
ITGB1-215ENST00000488494 SMLR1H3BR10 107 aa12.3□□□□□ -0.44
ITGB1-215ENST00000488494 ZNF726P1Q15940 193 aa12.3□□□□□ -0.44
ITGB1-215ENST00000488494 NDFIP1Q9BT67 221 aa12.3□□□□□ -0.44
ITGB1-215ENST00000488494 PKD1P98161 4303 aa12.29□□□□□ -0.44
ITGB1-215ENST00000488494 A0A096LPF7 62 aa12.29□□□□□ -0.44
ITGB1-215ENST00000488494 TRAV21A0A0B4J279 112 aa12.29□□□□□ -0.44
ITGB1-215ENST00000488494 K7EQM0 130 aa12.29□□□□□ -0.44
ITGB1-215ENST00000488494 ESRGQ1W209 222 aa12.29□□□□□ -0.44
ITGB1-215ENST00000488494 TDRG1Q3Y452 100 aa12.29□□□□□ -0.44
ITGB1-215ENST00000488494 CTXND1A0A1B0GTU2 59 aa12.28□□□□□ -0.44
ITGB1-215ENST00000488494 PAX4O43316 350 aa12.28□□□□□ -0.44
ITGB1-215ENST00000488494 AKR1C8PQ5T2L2 129 aa12.28□□□□□ -0.44
ITGB1-215ENST00000488494 CYB561D1Q8N8Q1 229 aa12.28□□□□□ -0.44
ITGB1-215ENST00000488494 MRPS16Q9Y3D3 137 aaKnown RBP12.28□□□□□ -0.44
ITGB1-215ENST00000488494 IGHV3-16A0A0C4DH30 117 aa12.27□□□□□ -0.45
ITGB1-215ENST00000488494 TAAR5O14804 337 aa12.27□□□□□ -0.45
ITGB1-215ENST00000488494 TYMSP04818 313 aa12.27□□□□□ -0.45
ITGB1-215ENST00000488494 SUMO1P63165 101 aaKnown RBP12.27□□□□□ -0.45
ITGB1-215ENST00000488494 C8orf49Q96NF6 230 aa12.27□□□□□ -0.45
ITGB1-215ENST00000488494 SPXQ9BT56 116 aa12.27□□□□□ -0.45
ITGB1-215ENST00000488494 UPK3BQ9BT76 320 aa12.27□□□□□ -0.45
ITGB1-215ENST00000488494 SDF2L1Q9HCN8 221 aa12.27□□□□□ -0.45
ITGB1-215ENST00000488494 PRO0255Q9UI72 69 aa12.27□□□□□ -0.45
ITGB1-215ENST00000488494 ICOSQ9Y6W8 199 aa12.27□□□□□ -0.45
ITGB1-215ENST00000488494 MUC4Q99102 2169 aa12.26□□□□□ -0.45
ITGB1-215ENST00000488494 GNRH2O43555 120 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms