RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 S100A11P31949 105 aa4.13□□□□□ -1.75
CDHR3-213ENST00000488386 RPL29P47914 159 aaKnown RBP4.13□□□□□ -1.75
CDHR3-213ENST00000488386 AMTP48728 403 aa4.13□□□□□ -1.75
CDHR3-213ENST00000488386 TAS2R60P59551 318 aa4.13□□□□□ -1.75
CDHR3-213ENST00000488386 CD300CQ08708 224 aa4.13□□□□□ -1.75
CDHR3-213ENST00000488386 BTN1A1Q13410 526 aa4.13□□□□□ -1.75
CDHR3-213ENST00000488386 RAB31Q13636 194 aa4.13□□□□□ -1.75
CDHR3-213ENST00000488386 PRR9Q5T870 116 aa4.13□□□□□ -1.75
CDHR3-213ENST00000488386 FAM122CQ6P4D5 195 aa4.13□□□□□ -1.75
CDHR3-213ENST00000488386 OR10J6PQ8NGY7 276 aa4.13□□□□□ -1.75
CDHR3-213ENST00000488386 HECTD4Q9Y4D8 3996 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 TRBV19A0A075B6N1 114 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 E5RGE8 158 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 SSNA1O43805 119 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 GAGE7O76087 117 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 GAGE12FP0CL80 117 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 GAGE12GP0CL81 117 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 GAGE12IP0CL82 117 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 HBG1P69891 147 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 HBG2P69892 147 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 OR5I1Q13606 314 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 OXA1LQ15070 435 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 SERTAD4-AS1Q5TG53 156 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 S100A7AQ86SG5 101 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 Q8TAT8 98 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 RNASE8Q8TDE3 154 aaKnown RBP4.12□□□□□ -1.75
CDHR3-213ENST00000488386 PPP1R1CQ8WVI7 109 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 PHYHIPLQ96FC7 376 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 C16orf74Q96GX8 76 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 FAM167A-AS1Q96KT0 104 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 PFDN5Q99471 154 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 VGLL1Q99990 258 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 NMES1Q9C002 83 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 WDR61Q9GZS3 305 aaKnown RBP4.12□□□□□ -1.75
CDHR3-213ENST00000488386 AGPAT4-IT1Q9H0P7 198 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 WFDC1Q9HC57 220 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 MBD2Q9UBB5 411 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 TP53TG3Q9ULZ0 132 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 TIMM9Q9Y5J7 89 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 PKD1P98161 4303 aa4.12□□□□□ -1.75
CDHR3-213ENST00000488386 TEX48A0A1B0GUV7 120 aa4.11□□□□□ -1.75
CDHR3-213ENST00000488386 A0A1B0GVY2 172 aa4.11□□□□□ -1.75
CDHR3-213ENST00000488386 GAGE10A6NGK3 116 aa4.11□□□□□ -1.75
CDHR3-213ENST00000488386 LYRM9A8MSI8 78 aa4.11□□□□□ -1.75
CDHR3-213ENST00000488386 H7BYZ3 331 aa4.11□□□□□ -1.75
CDHR3-213ENST00000488386 HMGB3O15347 200 aaKnown RBP4.11□□□□□ -1.75
CDHR3-213ENST00000488386 MPC2O95563 127 aa4.11□□□□□ -1.75
CDHR3-213ENST00000488386 RLN2P04090 185 aa4.11□□□□□ -1.75
CDHR3-213ENST00000488386 ATP5G1P05496 136 aa4.11□□□□□ -1.75
CDHR3-213ENST00000488386 HIST1H1EP10412 219 aaKnown RBP4.11□□□□□ -1.75
CDHR3-213ENST00000488386 RNASE4P34096 147 aaKnown RBP4.11□□□□□ -1.75
CDHR3-213ENST00000488386 LEPP41159 167 aa4.11□□□□□ -1.75
CDHR3-213ENST00000488386 ATP5G3P48201 142 aa4.11□□□□□ -1.75
CDHR3-213ENST00000488386 ATP6V1FQ16864 119 aa4.11□□□□□ -1.75
CDHR3-213ENST00000488386 Q6ZTI0 123 aa4.11□□□□□ -1.75
CDHR3-213ENST00000488386 TMEM263Q8WUH6 116 aaKnown RBP4.11□□□□□ -1.75
CDHR3-213ENST00000488386 TMED6Q8WW62 240 aa4.11□□□□□ -1.75
CDHR3-213ENST00000488386 FXYD5Q96DB9 178 aa4.11□□□□□ -1.75
CDHR3-213ENST00000488386 PAXXQ9BUH6 204 aa4.11□□□□□ -1.75
CDHR3-213ENST00000488386 SLC25A31Q9H0C2 315 aa4.11□□□□□ -1.75
CDHR3-213ENST00000488386 OR51M1Q9H341 326 aa4.11□□□□□ -1.75
CDHR3-213ENST00000488386 GSN-AS1Q9NRJ2 163 aa4.11□□□□□ -1.75
CDHR3-213ENST00000488386 RPH3ALQ9UNE2 315 aa4.11□□□□□ -1.75
CDHR3-213ENST00000488386 HSPB11Q9Y547 144 aa4.11□□□□□ -1.75
CDHR3-213ENST00000488386 ALG5Q9Y673 324 aa4.11□□□□□ -1.75
CDHR3-213ENST00000488386 TRAV26-1A0A087WT03 109 aa4.1□□□□□ -1.75
CDHR3-213ENST00000488386 C7orf71A4D174 169 aa4.1□□□□□ -1.75
CDHR3-213ENST00000488386 KRTAP29-1A8MX34 341 aaPredicted RBP4.1□□□□□ -1.75
CDHR3-213ENST00000488386 SNURFLB1AK76 121 aa4.1□□□□□ -1.75
CDHR3-213ENST00000488386 OR7C2O60412 319 aa4.1□□□□□ -1.75
CDHR3-213ENST00000488386 PRAF2O60831 178 aa4.1□□□□□ -1.75
CDHR3-213ENST00000488386 IGHV3-53P01767 116 aa4.1□□□□□ -1.75
CDHR3-213ENST00000488386 TSPOP30536 169 aa4.1□□□□□ -1.75
CDHR3-213ENST00000488386 RANP62826 216 aaKnown RBP4.1□□□□□ -1.75
CDHR3-213ENST00000488386 GUK1Q16774 197 aa4.1□□□□□ -1.75
CDHR3-213ENST00000488386 FFAR4Q5NUL3 377 aa4.1□□□□□ -1.75
CDHR3-213ENST00000488386 MUC21Q5SSG8 566 aa4.1□□□□□ -1.75
CDHR3-213ENST00000488386 Q6ZR54 194 aa4.1□□□□□ -1.75
CDHR3-213ENST00000488386 TMEM256Q8N2U0 113 aa4.1□□□□□ -1.75
CDHR3-213ENST00000488386 ATP5SQ99766 215 aa4.1□□□□□ -1.75
CDHR3-213ENST00000488386 ATG101Q9BSB4 218 aa4.1□□□□□ -1.75
CDHR3-213ENST00000488386 MARVELD1Q9BSK0 173 aa4.1□□□□□ -1.75
CDHR3-213ENST00000488386 TMEM14CQ9P0S9 112 aa4.1□□□□□ -1.75
CDHR3-213ENST00000488386 FUT9Q9Y231 359 aa4.1□□□□□ -1.75
CDHR3-213ENST00000488386 LINC00588Q9Y4M8 146 aa4.1□□□□□ -1.75
CDHR3-213ENST00000488386 KLF12Q9Y4X4 402 aa4.1□□□□□ -1.75
CDHR3-213ENST00000488386 TIMM8BQ9Y5J9 83 aaPredicted RBP4.1□□□□□ -1.75
CDHR3-213ENST00000488386 RYR1P21817 5038 aa4.1□□□□□ -1.75
CDHR3-213ENST00000488386 A0A096LPF7 62 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 IGLV5-52A0A0A0MRZ9 124 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 TRGV1A0A0A0MS02 117 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 KLLNB2CW77 178 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 ZNF253O75346 499 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 MPDU1O75352 247 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 ZNF324O75467 553 aaPredicted RBP4.09□□□□□ -1.75
CDHR3-213ENST00000488386 GPX1P07203 203 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 NBEAP1P0C6P0 100 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 RPL12P30050 165 aaKnown RBP4.09□□□□□ -1.75
CDHR3-213ENST00000488386 DEFA1P59665 94 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 DEFA3P59666 94 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms