RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 FAM57AQ8TBR7 257 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 IMUPQ9GZP8 106 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 LINC00574Q9H8X3 128 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 C21orf62Q9NYP8 219 aa3.67□□□□□ -1.82
CDC42BPA-213ENST00000488131 CACNA1DQ01668 2161 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 FREM1Q5H8C1 2179 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 DSCAML1Q8TD84 2053 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 TRBV19A0A075B6N1 114 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 TRAV8-4A0A0B4J246 113 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 CGB1A6NKQ9 187 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 LGALS9O00182 355 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 PRYO14603 147 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 NDUFA7O95182 113 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 IGKV1-16P04430 117 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 ATP5G1P05496 136 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 SLC25A16P16260 332 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 ORM2P19652 201 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 PRDX2P32119 198 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 CFHR3Q02985 330 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 EDDM3AQ14507 147 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 C17orf58Q2M2W7 97 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 ALKBH6Q3KRA9 238 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 SIGLEC15Q6ZMC9 328 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 ZNF826PQ6ZT77 177 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 MDP1Q86V88 176 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 MAFAQ8NHW3 353 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 TIMD4Q96H15 378 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 FAM173AQ9BQD7 235 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 AAMDCQ9H7C9 122 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 FZR1Q9UM11 496 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 HIGD1AQ9Y241 93 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 LAMA3Q16787 3333 aa3.66□□□□□ -1.82
CDC42BPA-213ENST00000488131 IGKV1D-17A0A075B6S4 117 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 TRAV2A0A0B4J234 112 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 SRRM5B3KS81 715 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 TIMM23O14925 209 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 UQCRQO14949 82 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 NPFFO15130 113 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 SH2D1AO60880 128 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 IGHV3-13P01766 116 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 TFF1P04155 84 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 RFPL3SP0C7P2 107 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 LINC00694P0DN24 101 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 TNFAIP6P98066 277 aaPredicted RBP3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 EBI3Q14213 229 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 DEFB121Q5J5C9 76 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 UTF1Q5T230 341 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 TEX36Q5VZQ5 186 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 ZNF833PQ6ZTB9 187 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 IL17RELQ6ZVW7 336 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 TMEM219Q86XT9 240 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 TDHQ8IZJ6 230 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 POM121L12Q8N7R1 296 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 ZNRF2Q8NHG8 242 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 LINC00526Q96FQ7 95 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 TPPP3Q9BW30 176 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 ASXL3Q9C0F0 2248 aa3.65□□□□□ -1.82
CDC42BPA-213ENST00000488131 KNL1Q8NG31 2342 aa3.65□□□□□ -1.83
CDC42BPA-213ENST00000488131 TMSB15BA0A087X1C1 80 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 A0A0J9YY99 117 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 ZNF815PA8K554 130 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 C9JAW5 83 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 H3BVH4 76 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 IGHV3-30P01768 117 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 CECR9P0C854 216 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 CFC1BP0CG36 223 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 CFC1P0CG37 223 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 IGHV3-30-5P0DP03 117 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 RPL7P18124 248 aaKnown RBP3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 PDE6HQ13956 83 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 LAGE3Q14657 143 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 PLGLAQ15195 96 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 HES3Q5TGS1 186 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 FAM19A5Q7Z5A7 132 aaPredicted RBP3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 EXOC3-AS1Q8N2X6 119 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 C3orf22Q8N5N4 141 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 NEXN-AS1Q8NBZ9 246 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 OR13C6PQ8NH95 151 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 NTN5Q8WTR8 489 aaPredicted RBP3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 TMEM101Q96IK0 257 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 BBC3Q96PG8 261 aaPredicted RBP3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 PRADC1Q9BSG0 188 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 SCNM1Q9BWG6 230 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 PRO1854Q9UHT4 67 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 PCNX2A6NKB5 2137 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 NAV3Q8IVL0 2385 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 CHD7Q9P2D1 2997 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 A0A0B4J2C4 111 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 TRBV10-2A0A0K0K1G8 114 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 A4D1N5 150 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 E7EUB6 86 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 H3BMM0 161 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 H3BRN7 92 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 H3BTX0 84 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 MRPS12O15235 138 aaKnown RBP3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 NDUFA3O95167 84 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 HOXA4Q00056 320 aaPredicted RBP3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 MZT1Q08AG7 82 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 ATXN8Q156A1 80 aa3.64□□□□□ -1.83
CDC42BPA-213ENST00000488131 LINC01620Q4KN68 170 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms