RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 MANBALQ9NQG1 85 aa1.85□□□□□ -2.11
USP48-209ENST00000487880 PSORS1C2Q9UIG4 136 aa1.85□□□□□ -2.11
USP48-209ENST00000487880 HHLA2Q9UM44 414 aa1.85□□□□□ -2.11
USP48-209ENST00000487880 TIMM9Q9Y5J7 89 aa1.85□□□□□ -2.11
USP48-209ENST00000487880 LY96Q9Y6Y9 160 aa1.85□□□□□ -2.11
USP48-209ENST00000487880 MDC1Q14676 2089 aaKnown RBP1.85□□□□□ -2.11
USP48-209ENST00000487880 NUP210LQ5VU65 1888 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 PTPRDP23468 1912 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 TNS1Q9HBL0 1735 aaKnown RBP1.84□□□□□ -2.11
USP48-209ENST00000487880 TRAV38-1A0A0B4J264 116 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 A0A0D9SEW6 157 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 MEIS3P1A6NDR6 274 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 DPRXA6NFQ7 191 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 KNCNA6PVL3 124 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 LY6LH3BQJ8 138 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 H3BRM9 83 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 TAX1BP3O14907 124 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 CRXO43186 299 aaPredicted RBP1.84□□□□□ -2.11
USP48-209ENST00000487880 PDE6DO43924 150 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 TNFP01375 233 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 HBZP02008 142 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 ZNF728P0DKX0 622 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 S100GP29377 79 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 GRPRP30550 384 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 GUCA1AP43080 201 aaPredicted RBP1.84□□□□□ -2.11
USP48-209ENST00000487880 SPINT3P49223 89 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 PSMB3P49720 205 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 GNG4P50150 75 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 CRYBA4P53673 196 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 CCL20P78556 96 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 HIST1H1AQ02539 215 aaPredicted RBP1.84□□□□□ -2.11
USP48-209ENST00000487880 RAB31Q13636 194 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 PDGFRLQ15198 375 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 ADIRFQ15847 76 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 TDRG1Q3Y452 100 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 C1orf140Q5VVS0 124 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 SLC48A1Q6P1K1 146 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 UNQ5815/PRO19632Q6UWF5 114 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 FOXI2Q6ZQN5 318 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 Q6ZS92 163 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 SGMS2Q8NHU3 365 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 RNF133Q8WVZ7 376 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 SDF2Q99470 211 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 GPER1Q99527 375 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 HSPB9Q9BQS6 159 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 GNB1LQ9BYB4 327 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 NAA60Q9H7X0 242 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 PLEKHJ1Q9NW61 149 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 SPANXCQ9NY87 97 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 RABAC1Q9UI14 185 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 LSM5Q9Y4Y9 91 aaKnown RBP1.84□□□□□ -2.11
USP48-209ENST00000487880 IER3IP1Q9Y5U9 82 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 R4GMQ9 66 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 ARL2-SNX15V9GYD0 113 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 CASP8AP2Q9UKL3 1982 aa1.84□□□□□ -2.11
USP48-209ENST00000487880 NUP210Q8TEM1 1887 aaPredicted RBP1.84□□□□□ -2.12
USP48-209ENST00000487880 THSD7AQ9UPZ6 1657 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 TRAV27A0A087WT01 109 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 A0A0G2JMM0 328 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 A0A0J9YY10 115 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 CTXND1A0A1B0GTU2 59 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 A0A1B0GWA3 101 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 A0A1B0GX78 115 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 A0A1W2PPB8 328 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 hADV38S2A0JD32 116 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 IGSF23A1L1A6 192 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 KIR3DP1A8MWS1 328 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 K7EP34 96 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 SDCBPO00560 298 aaPredicted RBP1.83□□□□□ -2.12
USP48-209ENST00000487880 ZNF737O75373 536 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 HAND1O96004 215 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 GYPBP06028 91 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 HIST1H1TP22492 207 aaPredicted RBP1.83□□□□□ -2.12
USP48-209ENST00000487880 RPS12P25398 132 aaKnown RBP1.83□□□□□ -2.12
USP48-209ENST00000487880 CRYBB3P26998 211 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 PEBP1P30086 187 aaKnown RBP1.83□□□□□ -2.12
USP48-209ENST00000487880 HINT1P49773 126 aaPredicted RBP1.83□□□□□ -2.12
USP48-209ENST00000487880 CKS1BP61024 79 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 HSD52Q0P140 79 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 TMEM267Q0VDI3 215 aaPredicted RBP1.83□□□□□ -2.12
USP48-209ENST00000487880 OR8B8Q15620 311 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 HLA-DRB5Q30154 266 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 BVES-AS1Q5T3Y7 98 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 C5orf17Q8NAS9 161 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 OR51A4Q8NGJ6 313 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 OR51T1Q8NGJ9 327 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 OR5D14Q8NGL3 314 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 PFN4Q8NHR9 129 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 MRPL30Q8TCC3 161 aaKnown RBP1.83□□□□□ -2.12
USP48-209ENST00000487880 KLK6Q92876 244 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 BORCS7Q96B45 105 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 NMNAT3Q96T66 252 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 SPANXDQ9BXN6 97 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 TTTY12Q9BZ98 90 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 SMIM3Q9BZL3 60 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 LINC00470Q9BZP3 86 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 COMMD5Q9GZQ3 224 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 SH3BGRL3Q9H299 93 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 MED29Q9NX70 200 aa1.83□□□□□ -2.12
USP48-209ENST00000487880 TAS2R4Q9NYW5 299 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms