RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 UBR2Q8IWV8 1755 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 MYH3P11055 1940 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 PTPRSQ13332 1948 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 DENND4CQ5VZ89 1909 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 A0A0G2JMM0 328 aa1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 A0A1W2PPB8 328 aa1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 C9orf170A2RU37 121 aa1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 KIR3DP1A8MWS1 328 aa1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 ZNF736B4DX44 427 aaPredicted RBP1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 EDF1O60869 148 aaKnown RBP1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 HYPMO75409 117 aa1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 CD3DP04234 171 aa1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 APODP05090 189 aa1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 CD14P08571 375 aa1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 PYYP10082 97 aa1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 MRPS10P82664 201 aaKnown RBP1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 PLGLB1Q02325 96 aa1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 CCSMST1Q4G0I0 132 aa1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 FAM74A1Q5RGS3 127 aa1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 TEX261Q6UWH6 196 aa1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 KCNRGQ8N5I3 272 aa1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 OR10AG1Q8NH19 301 aa1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 PSMF1Q92530 271 aa1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 MRPL57Q9BQC6 102 aaKnown RBP1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 PSMG3Q9BT73 122 aaPredicted RBP1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 GNG8Q9UK08 70 aa1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 CHCHD2Q9Y6H1 151 aaPredicted RBP1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 PTPRGP23470 1445 aa1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 ARHGAP31Q2M1Z3 1444 aa1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 MYH2Q9UKX2 1941 aa1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 TMEM2Q9UHN6 1383 aa1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 ARFGEF3Q5TH69 2177 aa1.2□□□□□ -2.22
HMGB1P36-201ENST00000487709 GRIN2AQ12879 1464 aa1.19□□□□□ -2.22
HMGB1P36-201ENST00000487709 TRBV6-8A0A0A6YYG3 113 aa1.19□□□□□ -2.22
HMGB1P36-201ENST00000487709 F8W1H4 67 aa1.19□□□□□ -2.22
HMGB1P36-201ENST00000487709 SYNJ1O43426 1573 aa1.19□□□□□ -2.22
HMGB1P36-201ENST00000487709 IGF2P01344 180 aa1.19□□□□□ -2.22
HMGB1P36-201ENST00000487709 COX7CP15954 63 aa1.19□□□□□ -2.22
HMGB1P36-201ENST00000487709 C10orf55Q5SWW7 151 aa1.19□□□□□ -2.22
HMGB1P36-201ENST00000487709 LINC01545Q5VT33 79 aa1.19□□□□□ -2.22
HMGB1P36-201ENST00000487709 ATP11AUNQ6ZP68 121 aa1.19□□□□□ -2.22
HMGB1P36-201ENST00000487709 FOXI2Q6ZQN5 318 aa1.19□□□□□ -2.22
HMGB1P36-201ENST00000487709 LINC00269Q8N2A0 174 aa1.19□□□□□ -2.22
HMGB1P36-201ENST00000487709 COPS9Q8WXC6 57 aa1.19□□□□□ -2.22
HMGB1P36-201ENST00000487709 TCEAL7Q9BRU2 100 aa1.19□□□□□ -2.22
HMGB1P36-201ENST00000487709 RERGLQ9H628 205 aa1.19□□□□□ -2.22
HMGB1P36-201ENST00000487709 ORMDL1Q9P0S3 153 aa1.19□□□□□ -2.22
HMGB1P36-201ENST00000487709 KLK9Q9UKQ9 250 aa1.19□□□□□ -2.22
HMGB1P36-201ENST00000487709 LSM2Q9Y333 95 aaKnown RBP1.19□□□□□ -2.22
HMGB1P36-201ENST00000487709 MED12LQ86YW9 2145 aa1.19□□□□□ -2.22
HMGB1P36-201ENST00000487709 GREB1Q4ZG55 1949 aa1.19□□□□□ -2.22
HMGB1P36-201ENST00000487709 PLXND1Q9Y4D7 1925 aa1.19□□□□□ -2.22
HMGB1P36-201ENST00000487709 RP1P56715 2156 aa1.18□□□□□ -2.22
HMGB1P36-201ENST00000487709 NUP98P52948 1817 aa1.18□□□□□ -2.22
HMGB1P36-201ENST00000487709 M0R2P5 195 aa1.18□□□□□ -2.22
HMGB1P36-201ENST00000487709 ZNF25P17030 456 aaPredicted RBP1.18□□□□□ -2.22
HMGB1P36-201ENST00000487709 FGF7P21781 194 aa1.18□□□□□ -2.22
HMGB1P36-201ENST00000487709 CNBPP62633 177 aaKnown RBP1.18□□□□□ -2.22
HMGB1P36-201ENST00000487709 MIR22HGQ0VDD5 57 aa1.18□□□□□ -2.22
HMGB1P36-201ENST00000487709 SNX29P2Q8IUI4 249 aa1.18□□□□□ -2.22
HMGB1P36-201ENST00000487709 FAM19A2Q8N3H0 131 aa1.18□□□□□ -2.22
HMGB1P36-201ENST00000487709 TCTEX1D1Q8N7M0 179 aa1.18□□□□□ -2.22
HMGB1P36-201ENST00000487709 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.18□□□□□ -2.22
HMGB1P36-201ENST00000487709 ATP6V0E2Q8NHE4 81 aa1.18□□□□□ -2.22
HMGB1P36-201ENST00000487709 Q8TAT8 98 aa1.18□□□□□ -2.22
HMGB1P36-201ENST00000487709 SDF2Q99470 211 aa1.18□□□□□ -2.22
HMGB1P36-201ENST00000487709 PDCD10Q9BUL8 212 aa1.18□□□□□ -2.22
HMGB1P36-201ENST00000487709 NOP16Q9Y3C1 178 aaKnown RBP1.18□□□□□ -2.22
HMGB1P36-201ENST00000487709 OBSL1O75147 1896 aa1.18□□□□□ -2.22
HMGB1P36-201ENST00000487709 SBF1O95248 1867 aa1.18□□□□□ -2.22
HMGB1P36-201ENST00000487709 UHRF1BP1LA0JNW5 1464 aa1.18□□□□□ -2.22
HMGB1P36-201ENST00000487709 MYH11P35749 1972 aa1.17□□□□□ -2.22
HMGB1P36-201ENST00000487709 TAF1LQ8IZX4 1826 aa1.17□□□□□ -2.22
HMGB1P36-201ENST00000487709 ALPK2Q86TB3 2170 aa1.17□□□□□ -2.22
HMGB1P36-201ENST00000487709 FGD6Q6ZV73 1430 aa1.17□□□□□ -2.22
HMGB1P36-201ENST00000487709 N4BP2Q86UW6 1770 aaPredicted RBP1.17□□□□□ -2.22
HMGB1P36-201ENST00000487709 H3BRM9 83 aa1.17□□□□□ -2.22
HMGB1P36-201ENST00000487709 J3QLW9 94 aa1.17□□□□□ -2.22
HMGB1P36-201ENST00000487709 M0R129 80 aa1.17□□□□□ -2.22
HMGB1P36-201ENST00000487709 CCL16O15467 120 aa1.17□□□□□ -2.22
HMGB1P36-201ENST00000487709 AKAIN1P0CW23 69 aa1.17□□□□□ -2.22
HMGB1P36-201ENST00000487709 OCIAD2Q56VL3 154 aa1.17□□□□□ -2.22
HMGB1P36-201ENST00000487709 MEIG1Q5JSS6 88 aa1.17□□□□□ -2.22
HMGB1P36-201ENST00000487709 KRTAP26-1Q6PEX3 210 aa1.17□□□□□ -2.22
HMGB1P36-201ENST00000487709 IDO2Q6ZQW0 420 aa1.17□□□□□ -2.22
HMGB1P36-201ENST00000487709 C3orf62Q6ZUJ4 267 aa1.17□□□□□ -2.22
HMGB1P36-201ENST00000487709 Q8N2B8 174 aa1.17□□□□□ -2.22
HMGB1P36-201ENST00000487709 C5orf17Q8NAS9 161 aa1.17□□□□□ -2.22
HMGB1P36-201ENST00000487709 LINC00052Q96N35 136 aa1.17□□□□□ -2.22
HMGB1P36-201ENST00000487709 SNRNP25Q9BV90 132 aaKnown RBP1.17□□□□□ -2.22
HMGB1P36-201ENST00000487709 TAS2R8Q9NYW2 309 aa1.17□□□□□ -2.22
HMGB1P36-201ENST00000487709 NUP210Q8TEM1 1887 aaPredicted RBP1.17□□□□□ -2.22
HMGB1P36-201ENST00000487709 FLG2Q5D862 2391 aaPredicted RBP1.16□□□□□ -2.22
HMGB1P36-201ENST00000487709 HEATR5AQ86XA9 2040 aa1.16□□□□□ -2.22
HMGB1P36-201ENST00000487709 MYOM3Q5VTT5 1437 aa1.16□□□□□ -2.22
HMGB1P36-201ENST00000487709 NUP210LQ5VU65 1888 aa1.16□□□□□ -2.22
HMGB1P36-201ENST00000487709 FAM135AQ9P2D6 1515 aa1.16□□□□□ -2.22
HMGB1P36-201ENST00000487709 DOCK4Q8N1I0 1966 aa1.16□□□□□ -2.22
HMGB1P36-201ENST00000487709 TRAV12-2A0A075B6T6 113 aa1.16□□□□□ -2.22
HMGB1P36-201ENST00000487709 TRAV2A0A0B4J234 112 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms