RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 IGHV3-64A0A075B6Q5 118 aa12.06□□□□□ -0.48
HLA-DQB1-209ENST00000487676 SPAARA0A1B0GVQ0 90 aa12.06□□□□□ -0.48
HLA-DQB1-209ENST00000487676 E7EUB6 86 aa12.05□□□□□ -0.48
HLA-DQB1-209ENST00000487676 HTN1P15515 57 aa12.05□□□□□ -0.48
HLA-DQB1-209ENST00000487676 ZNF883P0CG24 379 aa12.05□□□□□ -0.48
HLA-DQB1-209ENST00000487676 C9orf153Q5TBE3 101 aa12.05□□□□□ -0.48
HLA-DQB1-209ENST00000487676 TEX36Q5VZQ5 186 aa12.05□□□□□ -0.48
HLA-DQB1-209ENST00000487676 LYPD2Q6UXB3 125 aa12.05□□□□□ -0.48
HLA-DQB1-209ENST00000487676 LTBP2Q14767 1821 aa12.05□□□□□ -0.48
HLA-DQB1-209ENST00000487676 ACACAQ13085 2346 aa12.05□□□□□ -0.48
HLA-DQB1-209ENST00000487676 DNAL4O96015 105 aa12.04□□□□□ -0.48
HLA-DQB1-209ENST00000487676 LHBP01229 141 aa12.04□□□□□ -0.48
HLA-DQB1-209ENST00000487676 TCF15Q12870 199 aa12.04□□□□□ -0.48
HLA-DQB1-209ENST00000487676 PMVKQ15126 192 aa12.04□□□□□ -0.48
HLA-DQB1-209ENST00000487676 C5orf64Q2M2E5 130 aa12.04□□□□□ -0.48
HLA-DQB1-209ENST00000487676 ZNF474Q6S9Z5 364 aaPredicted RBP12.04□□□□□ -0.48
HLA-DQB1-209ENST00000487676 IGKV1-17P01599 117 aa12.04□□□□□ -0.48
HLA-DQB1-209ENST00000487676 IL17RELQ6ZVW7 336 aa12.04□□□□□ -0.48
HLA-DQB1-209ENST00000487676 RNASE6Q93091 150 aaKnown RBP12.04□□□□□ -0.48
HLA-DQB1-209ENST00000487676 CRYGCP07315 174 aa12.04□□□□□ -0.48
HLA-DQB1-209ENST00000487676 IGLV3-9A0A075B6K5 115 aa12.03□□□□□ -0.48
HLA-DQB1-209ENST00000487676 IGKV2D-26A0A0A0MRZ7 120 aa12.03□□□□□ -0.48
HLA-DQB1-209ENST00000487676 CFAP161Q6P656 301 aa12.03□□□□□ -0.48
HLA-DQB1-209ENST00000487676 PTH2Q96A98 100 aa12.03□□□□□ -0.48
HLA-DQB1-209ENST00000487676 MALRD1Q5VYJ5 2156 aa12.03□□□□□ -0.48
HLA-DQB1-209ENST00000487676 OVOL1O14753 267 aa12.03□□□□□ -0.48
HLA-DQB1-209ENST00000487676 CGB3P0DN86 165 aa12.03□□□□□ -0.48
HLA-DQB1-209ENST00000487676 CGB7P0DN87 165 aa12.03□□□□□ -0.48
HLA-DQB1-209ENST00000487676 PLXNB1O43157 2135 aa12.02□□□□□ -0.48
HLA-DQB1-209ENST00000487676 FAM90A27PA6NNH2 459 aa12.02□□□□□ -0.48
HLA-DQB1-209ENST00000487676 TP53TG1Q9Y2A0 90 aa12.02□□□□□ -0.48
HLA-DQB1-209ENST00000487676 TRAV12-3A0A0B4J271 114 aa12.02□□□□□ -0.49
HLA-DQB1-209ENST00000487676 ANKRD29Q8N6D5 301 aa12.02□□□□□ -0.49
HLA-DQB1-209ENST00000487676 CITED1Q99966 193 aa12.02□□□□□ -0.49
HLA-DQB1-209ENST00000487676 SPANXDQ9BXN6 97 aa12.02□□□□□ -0.49
HLA-DQB1-209ENST00000487676 C8orf31Q8N9H6 132 aa12.02□□□□□ -0.49
HLA-DQB1-209ENST00000487676 C15orf32Q32M92 178 aa12.01□□□□□ -0.49
HLA-DQB1-209ENST00000487676 C1orf229Q6ZS94 237 aaPredicted RBP12.01□□□□□ -0.49
HLA-DQB1-209ENST00000487676 TRAV12-1A0A0B4J245 112 aa12.01□□□□□ -0.49
HLA-DQB1-209ENST00000487676 CFC1BP0CG36 223 aa12.01□□□□□ -0.49
HLA-DQB1-209ENST00000487676 CFC1P0CG37 223 aa12.01□□□□□ -0.49
HLA-DQB1-209ENST00000487676 TMEM141Q96I45 108 aa12.01□□□□□ -0.49
HLA-DQB1-209ENST00000487676 LINC00477Q96M19 166 aa12.01□□□□□ -0.49
HLA-DQB1-209ENST00000487676 PRR14LQ5THK1 2151 aa12.01□□□□□ -0.49
HLA-DQB1-209ENST00000487676 C16orf54Q6UWD8 224 aa12.01□□□□□ -0.49
HLA-DQB1-209ENST00000487676 DEFB124Q8NES8 71 aa12.01□□□□□ -0.49
HLA-DQB1-209ENST00000487676 NUP37Q8NFH4 326 aa12.01□□□□□ -0.49
HLA-DQB1-209ENST00000487676 C7orf69Q9H7B7 122 aa12.01□□□□□ -0.49
HLA-DQB1-209ENST00000487676 GPR179Q6PRD1 2367 aa12.01□□□□□ -0.49
HLA-DQB1-209ENST00000487676 C9orf139Q6ZV77 190 aa12□□□□□ -0.49
HLA-DQB1-209ENST00000487676 MBD3L4A6NDZ8 208 aaPredicted RBP12□□□□□ -0.49
HLA-DQB1-209ENST00000487676 MBD3L3A6NE82 208 aaPredicted RBP12□□□□□ -0.49
HLA-DQB1-209ENST00000487676 MBD3L5A6NJ08 208 aaPredicted RBP12□□□□□ -0.49
HLA-DQB1-209ENST00000487676 CD7P09564 240 aa12□□□□□ -0.49
HLA-DQB1-209ENST00000487676 MBD3L2Q8NHZ7 208 aaPredicted RBP12□□□□□ -0.49
HLA-DQB1-209ENST00000487676 J3QQQ9 107 aa11.99□□□□□ -0.49
HLA-DQB1-209ENST00000487676 OR13C6PQ8NH95 151 aa11.99□□□□□ -0.49
HLA-DQB1-209ENST00000487676 I3L2K1 104 aa11.99□□□□□ -0.49
HLA-DQB1-209ENST00000487676 LOXP28300 417 aaPredicted RBP11.99□□□□□ -0.49
HLA-DQB1-209ENST00000487676 DEFB104AQ8WTQ1 72 aa11.99□□□□□ -0.49
HLA-DQB1-209ENST00000487676 TRAV8-3A0A0A6YYJ7 113 aa11.99□□□□□ -0.49
HLA-DQB1-209ENST00000487676 SPRNQ5BIV9 151 aa11.99□□□□□ -0.49
HLA-DQB1-209ENST00000487676 TRGV3P03979 118 aa11.98□□□□□ -0.49
HLA-DQB1-209ENST00000487676 PF4V1P10720 104 aa11.98□□□□□ -0.49
HLA-DQB1-209ENST00000487676 TNFRSF18Q9Y5U5 241 aa11.98□□□□□ -0.49
HLA-DQB1-209ENST00000487676 U3KQK5 164 aa11.98□□□□□ -0.49
HLA-DQB1-209ENST00000487676 LGALS1P09382 135 aaKnown RBP11.98□□□□□ -0.49
HLA-DQB1-209ENST00000487676 CD28P10747 220 aa11.98□□□□□ -0.49
HLA-DQB1-209ENST00000487676 UTF1Q5T230 341 aa11.98□□□□□ -0.49
HLA-DQB1-209ENST00000487676 PIFOQ8TCI5 191 aa11.98□□□□□ -0.49
HLA-DQB1-209ENST00000487676 HERV-K104P63124 156 aa11.98□□□□□ -0.49
HLA-DQB1-209ENST00000487676 C3orf36Q3SXR2 165 aa11.98□□□□□ -0.49
HLA-DQB1-209ENST00000487676 PCNX1Q96RV3 2341 aa11.97□□□□□ -0.49
HLA-DQB1-209ENST00000487676 IGLV2-23P01705 113 aa11.97□□□□□ -0.49
HLA-DQB1-209ENST00000487676 DYNAPQ8N1N2 210 aa11.97□□□□□ -0.49
HLA-DQB1-209ENST00000487676 CFHR4Q92496 578 aa11.97□□□□□ -0.49
HLA-DQB1-209ENST00000487676 LYNX1G3V0Z9 82 aa11.96□□□□□ -0.49
HLA-DQB1-209ENST00000487676 LYNX1P0DP58 116 aa11.96□□□□□ -0.49
HLA-DQB1-209ENST00000487676 KLHL30-AS1Q8NEE0 82 aa11.96□□□□□ -0.49
HLA-DQB1-209ENST00000487676 CDX4O14627 284 aaPredicted RBP11.96□□□□□ -0.49
HLA-DQB1-209ENST00000487676 K7EIM0 57 aa11.96□□□□□ -0.5
HLA-DQB1-209ENST00000487676 INSL3P51460 131 aa11.96□□□□□ -0.5
HLA-DQB1-209ENST00000487676 FAM57AQ8TBR7 257 aa11.96□□□□□ -0.5
HLA-DQB1-209ENST00000487676 EDA2RQ9HAV5 297 aa11.96□□□□□ -0.5
HLA-DQB1-209ENST00000487676 TIMM21Q9BVV7 248 aa11.95□□□□□ -0.5
HLA-DQB1-209ENST00000487676 C19orf54Q5BKX5 351 aa11.95□□□□□ -0.5
HLA-DQB1-209ENST00000487676 MAPKAPK5-AS1Q8N8E1 139 aa11.95□□□□□ -0.5
HLA-DQB1-209ENST00000487676 CREBBPQ92793 2442 aa11.95□□□□□ -0.5
HLA-DQB1-209ENST00000487676 NPFFO15130 113 aa11.95□□□□□ -0.5
HLA-DQB1-209ENST00000487676 NDUFV3P56181 108 aaKnown RBP11.95□□□□□ -0.5
HLA-DQB1-209ENST00000487676 NPC2P61916 151 aa11.95□□□□□ -0.5
HLA-DQB1-209ENST00000487676 PAX8Q06710 450 aa11.95□□□□□ -0.5
HLA-DQB1-209ENST00000487676 IGKV3-20P01619 116 aa11.94□□□□□ -0.5
HLA-DQB1-209ENST00000487676 RITA1Q96K30 269 aa11.94□□□□□ -0.5
HLA-DQB1-209ENST00000487676 TMEM126AQ9H061 195 aa11.94□□□□□ -0.5
HLA-DQB1-209ENST00000487676 CD59P13987 128 aa11.94□□□□□ -0.5
HLA-DQB1-209ENST00000487676 LINC01620Q4KN68 170 aa11.94□□□□□ -0.5
HLA-DQB1-209ENST00000487676 AGPAT4-IT1Q9H0P7 198 aa11.94□□□□□ -0.5
HLA-DQB1-209ENST00000487676 C10orf142B7Z368 130 aa11.93□□□□□ -0.5
HLA-DQB1-209ENST00000487676 SRD5A1P18405 259 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms