RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 TMPRSS5Q9H3S3 457 aa8.66□□□□□ -1.02
SREBF1-215ENST00000487401 H0YIZ8 118 aa8.65□□□□□ -1.02
SREBF1-215ENST00000487401 ARPC5O15511 151 aa8.65□□□□□ -1.02
SREBF1-215ENST00000487401 CRISP2P16562 243 aa8.65□□□□□ -1.02
SREBF1-215ENST00000487401 CSN1S1P47710 185 aa8.65□□□□□ -1.02
SREBF1-215ENST00000487401 ESRGQ1W209 222 aa8.65□□□□□ -1.02
SREBF1-215ENST00000487401 TTC32Q5I0X7 151 aa8.65□□□□□ -1.02
SREBF1-215ENST00000487401 VGLL1Q99990 258 aa8.65□□□□□ -1.02
SREBF1-215ENST00000487401 FUT9Q9Y231 359 aa8.65□□□□□ -1.02
SREBF1-215ENST00000487401 FXYD6-FXYD2A0A087WZ82 144 aa8.64□□□□□ -1.03
SREBF1-215ENST00000487401 A0A0D9SG52 128 aa8.64□□□□□ -1.03
SREBF1-215ENST00000487401 OR7C2O60412 319 aa8.64□□□□□ -1.03
SREBF1-215ENST00000487401 OR10J4P0C629 311 aa8.64□□□□□ -1.03
SREBF1-215ENST00000487401 ZNF138P52744 262 aa8.64□□□□□ -1.03
SREBF1-215ENST00000487401 TOR2AQ5JU69 321 aa8.64□□□□□ -1.03
SREBF1-215ENST00000487401 C11orf72Q8NBR9 251 aa8.64□□□□□ -1.03
SREBF1-215ENST00000487401 SCGB1C1Q8TD33 95 aa8.64□□□□□ -1.03
SREBF1-215ENST00000487401 ZNF492Q9P255 531 aa8.64□□□□□ -1.03
SREBF1-215ENST00000487401 KLF12Q9Y4X4 402 aa8.64□□□□□ -1.03
SREBF1-215ENST00000487401 PCLOQ9Y6V0 5065 aa8.64□□□□□ -1.03
SREBF1-215ENST00000487401 IGHV1OR15-1A0A075B7D0 117 aa8.63□□□□□ -1.03
SREBF1-215ENST00000487401 C16orf90A8MZG2 172 aa8.63□□□□□ -1.03
SREBF1-215ENST00000487401 SPINK4O60575 86 aa8.63□□□□□ -1.03
SREBF1-215ENST00000487401 IFNA5P01569 189 aa8.63□□□□□ -1.03
SREBF1-215ENST00000487401 PET100P0DJ07 73 aa8.63□□□□□ -1.03
SREBF1-215ENST00000487401 RANP62826 216 aaKnown RBP8.63□□□□□ -1.03
SREBF1-215ENST00000487401 FFAR4Q5NUL3 377 aa8.63□□□□□ -1.03
SREBF1-215ENST00000487401 SLC51BQ86UW2 128 aa8.63□□□□□ -1.03
SREBF1-215ENST00000487401 KCNRGQ8N5I3 272 aa8.63□□□□□ -1.03
SREBF1-215ENST00000487401 ZFAND2AQ8N6M9 145 aa8.63□□□□□ -1.03
SREBF1-215ENST00000487401 PPP1R1CQ8WVI7 109 aa8.63□□□□□ -1.03
SREBF1-215ENST00000487401 FXYD5Q96DB9 178 aa8.63□□□□□ -1.03
SREBF1-215ENST00000487401 C18orf15Q96N68 181 aa8.63□□□□□ -1.03
SREBF1-215ENST00000487401 ATP5SQ99766 215 aa8.63□□□□□ -1.03
SREBF1-215ENST00000487401 ARPC5LQ9BPX5 153 aa8.63□□□□□ -1.03
SREBF1-215ENST00000487401 MRPS16Q9Y3D3 137 aaKnown RBP8.63□□□□□ -1.03
SREBF1-215ENST00000487401 RYR1P21817 5038 aa8.63□□□□□ -1.03
SREBF1-215ENST00000487401 TCL1AP56279 114 aa8.62□□□□□ -1.03
SREBF1-215ENST00000487401 IBA57Q5T440 356 aaKnown RBP8.62□□□□□ -1.03
SREBF1-215ENST00000487401 LYPD1Q8N2G4 141 aa8.62□□□□□ -1.03
SREBF1-215ENST00000487401 PHYHIPLQ96FC7 376 aa8.62□□□□□ -1.03
SREBF1-215ENST00000487401 UPK3BQ9BT76 320 aa8.62□□□□□ -1.03
SREBF1-215ENST00000487401 TRBV7-9A0A0J9YWB2 115 aa8.61□□□□□ -1.03
SREBF1-215ENST00000487401 A0A1W2PPQ1 181 aa8.61□□□□□ -1.03
SREBF1-215ENST00000487401 PAX4O43316 350 aa8.61□□□□□ -1.03
SREBF1-215ENST00000487401 IGHV3-53P01767 116 aa8.61□□□□□ -1.03
SREBF1-215ENST00000487401 RPL12P30050 165 aaKnown RBP8.61□□□□□ -1.03
SREBF1-215ENST00000487401 TAS2R45P59539 299 aa8.61□□□□□ -1.03
SREBF1-215ENST00000487401 UBE2L3P68036 154 aaKnown RBP8.61□□□□□ -1.03
SREBF1-215ENST00000487401 SLAQ13239 276 aa8.61□□□□□ -1.03
SREBF1-215ENST00000487401 ZNF345Q14585 488 aa8.61□□□□□ -1.03
SREBF1-215ENST00000487401 PRR9Q5T870 116 aa8.61□□□□□ -1.03
SREBF1-215ENST00000487401 Q8TAT8 98 aa8.61□□□□□ -1.03
SREBF1-215ENST00000487401 PCNPQ8WW12 178 aaKnown RBP8.61□□□□□ -1.03
SREBF1-215ENST00000487401 VSIG2Q96IQ7 327 aa8.61□□□□□ -1.03
SREBF1-215ENST00000487401 SMIM3Q9BZL3 60 aa8.61□□□□□ -1.03
SREBF1-215ENST00000487401 Q9H3A6 140 aa8.61□□□□□ -1.03
SREBF1-215ENST00000487401 TP53TG3Q9ULZ0 132 aa8.61□□□□□ -1.03
SREBF1-215ENST00000487401 TNFSF18Q9UNG2 199 aa8.61□□□□□ -1.03
SREBF1-215ENST00000487401 LRP1BQ9NZR2 4599 aa8.6□□□□□ -1.03
SREBF1-215ENST00000487401 A0A096LPF7 62 aa8.6□□□□□ -1.03
SREBF1-215ENST00000487401 RBAKDNA6NC62 111 aa8.6□□□□□ -1.03
SREBF1-215ENST00000487401 ZNF415Q09FC8 603 aa8.6□□□□□ -1.03
SREBF1-215ENST00000487401 KHDC3LQ587J8 217 aa8.6□□□□□ -1.03
SREBF1-215ENST00000487401 Q6ZQT7 251 aa8.6□□□□□ -1.03
SREBF1-215ENST00000487401 MRPL16Q9NX20 251 aaKnown RBP8.6□□□□□ -1.03
SREBF1-215ENST00000487401 ICOSQ9Y6W8 199 aa8.6□□□□□ -1.03
SREBF1-215ENST00000487401 KANTRA0A1W2PQU2 76 aa8.59□□□□□ -1.03
SREBF1-215ENST00000487401 BCL2L11O43521 198 aa8.59□□□□□ -1.03
SREBF1-215ENST00000487401 BTF3P20290 206 aaKnown RBP8.59□□□□□ -1.03
SREBF1-215ENST00000487401 ZNF266Q14584 549 aa8.59□□□□□ -1.03
SREBF1-215ENST00000487401 MUC21Q5SSG8 566 aa8.59□□□□□ -1.03
SREBF1-215ENST00000487401 ALKAL2Q6UX46 152 aa8.59□□□□□ -1.03
SREBF1-215ENST00000487401 CMTM2Q8TAZ6 248 aa8.59□□□□□ -1.03
SREBF1-215ENST00000487401 SUN5Q8TC36 379 aa8.59□□□□□ -1.03
SREBF1-215ENST00000487401 PRO0255Q9UI72 69 aa8.59□□□□□ -1.03
SREBF1-215ENST00000487401 HHLA3Q9XRX5 114 aa8.59□□□□□ -1.03
SREBF1-215ENST00000487401 DIRC3C9JPN6 131 aa8.58□□□□□ -1.04
SREBF1-215ENST00000487401 ACOT6Q3I5F7 207 aaPredicted RBP8.58□□□□□ -1.04
SREBF1-215ENST00000487401 FAM74A1Q5RGS3 127 aa8.58□□□□□ -1.04
SREBF1-215ENST00000487401 FAM159AQ6UWV7 190 aa8.58□□□□□ -1.04
SREBF1-215ENST00000487401 SPATA12Q7Z6I5 190 aa8.58□□□□□ -1.04
SREBF1-215ENST00000487401 KRTAP1-5Q9BYS1 174 aa8.58□□□□□ -1.04
SREBF1-215ENST00000487401 OTORQ9NRC9 128 aa8.58□□□□□ -1.04
SREBF1-215ENST00000487401 MBD2Q9UBB5 411 aa8.58□□□□□ -1.04
SREBF1-215ENST00000487401 LENEPQ9Y5L5 61 aa8.58□□□□□ -1.04
SREBF1-215ENST00000487401 DNAH5Q8TE73 4624 aa8.57□□□□□ -1.04
SREBF1-215ENST00000487401 TRGV4A0A0C4DH28 118 aa8.57□□□□□ -1.04
SREBF1-215ENST00000487401 A0A1W2PPV4 95 aa8.57□□□□□ -1.04
SREBF1-215ENST00000487401 RNF222A6NCQ9 220 aa8.57□□□□□ -1.04
SREBF1-215ENST00000487401 PGPA6NDG6 321 aa8.57□□□□□ -1.04
SREBF1-215ENST00000487401 KRBOX1C9JBD0 128 aa8.57□□□□□ -1.04
SREBF1-215ENST00000487401 C8orf49Q96NF6 230 aa8.57□□□□□ -1.04
SREBF1-215ENST00000487401 MDFICQ9P1T7 246 aa8.57□□□□□ -1.04
SREBF1-215ENST00000487401 RPH3ALQ9UNE2 315 aa8.57□□□□□ -1.04
SREBF1-215ENST00000487401 HSPG2P98160 4391 aa8.57□□□□□ -1.04
SREBF1-215ENST00000487401 TRGV11A0A075B6L2 103 aa8.56□□□□□ -1.04
SREBF1-215ENST00000487401 SIVA1O15304 175 aa8.56□□□□□ -1.04
SREBF1-215ENST00000487401 EIF3GO75821 320 aaKnown RBP eCLIP8.56□□□□□ -1.04
SREBF1-215ENST00000487401 NXPH4O95158 308 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms