RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 ZC2HC1BQ5TFG8 222 aa4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 GDF5OSQ5U4N7 250 aa4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 FAM78BQ5VT40 261 aa4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 MIR17HGQ75NE6 70 aa4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 ZNF709Q8N972 641 aa4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 HSD17B11Q8NBQ5 300 aa4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 OR1L4Q8NGR5 311 aa4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 FAM167A-AS1Q96KT0 104 aa4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 LINC00479Q96M42 142 aa4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 LINC00052Q96N35 136 aa4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 GPR82Q96P67 336 aa4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 ZNF586Q9NXT0 402 aa4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 MUC2Q02817 5179 aa4.47□□□□□ -1.69
RTFDC1-209ENST00000487211 F6UB75 175 aa4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 H3BMM0 161 aa4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 ISLRO14498 428 aa4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 GIG44P09565 113 aaPredicted RBP4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 IGLC2P0DOY2 106 aa4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 PYYP10082 97 aa4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 S100A7P31151 101 aa4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 FHITP49789 147 aa4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 SNRPD3P62318 126 aaKnown RBP4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 HERV-K104P63124 156 aa4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 ZNF266Q14584 549 aa4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 LGALSLQ3ZCW2 172 aaPredicted RBP4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 ACTL10Q5JWF8 245 aa4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 S100A7AQ86SG5 101 aa4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 BPIFA4PQ86YQ2 179 aa4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 TCTE3Q8IZS6 198 aa4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 KCNRGQ8N5I3 272 aa4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 RNF182Q8N6D2 247 aa4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 PFDN5Q99471 154 aa4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 TM2D3Q9BRN9 247 aa4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 SLC25A2Q9BXI2 301 aa4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 SH3BGRL3Q9H299 93 aa4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 RETNQ9HD89 108 aa4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 TIMM9Q9Y5J7 89 aa4.46□□□□□ -1.7
RTFDC1-209ENST00000487211 ZNF705FA8MVS1 300 aaPredicted RBP4.45□□□□□ -1.7
RTFDC1-209ENST00000487211 SLC17A3O00476 420 aa4.45□□□□□ -1.7
RTFDC1-209ENST00000487211 TAAR5O14804 337 aa4.45□□□□□ -1.7
RTFDC1-209ENST00000487211 ZNF705DP0CH99 300 aaPredicted RBP4.45□□□□□ -1.7
RTFDC1-209ENST00000487211 ZNF705BP0CI00 300 aaPredicted RBP4.45□□□□□ -1.7
RTFDC1-209ENST00000487211 HIST1H1EP10412 219 aaKnown RBP4.45□□□□□ -1.7
RTFDC1-209ENST00000487211 M6PRP20645 277 aa4.45□□□□□ -1.7
RTFDC1-209ENST00000487211 ID1P41134 155 aa4.45□□□□□ -1.7
RTFDC1-209ENST00000487211 PSMB3P49720 205 aa4.45□□□□□ -1.7
RTFDC1-209ENST00000487211 MEOX2P50222 304 aa4.45□□□□□ -1.7
RTFDC1-209ENST00000487211 CNN1P51911 297 aaKnown RBP4.45□□□□□ -1.7
RTFDC1-209ENST00000487211 RAB2AP61019 212 aa4.45□□□□□ -1.7
RTFDC1-209ENST00000487211 PSG3Q16557 428 aa4.45□□□□□ -1.7
RTFDC1-209ENST00000487211 RPP25LQ8N5L8 163 aaKnown RBP4.45□□□□□ -1.7
RTFDC1-209ENST00000487211 OR10G4Q8NGN3 311 aa4.45□□□□□ -1.7
RTFDC1-209ENST00000487211 OR10G9Q8NGN4 311 aa4.45□□□□□ -1.7
RTFDC1-209ENST00000487211 OR2G3Q8NGZ4 309 aa4.45□□□□□ -1.7
RTFDC1-209ENST00000487211 MRPL53Q96EL3 112 aaKnown RBP4.45□□□□□ -1.7
RTFDC1-209ENST00000487211 SAV1Q9H4B6 383 aaPredicted RBP4.45□□□□□ -1.7
RTFDC1-209ENST00000487211 ZNF331Q9NQX6 463 aaPredicted RBP4.45□□□□□ -1.7
RTFDC1-209ENST00000487211 TMEM14CQ9P0S9 112 aa4.45□□□□□ -1.7
RTFDC1-209ENST00000487211 FUT9Q9Y231 359 aa4.45□□□□□ -1.7
RTFDC1-209ENST00000487211 TRBV19A0A075B6N1 114 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 BORCS7-ASMTA0A0B4J1R7 106 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 IGHV3-38A0A0C4DH36 116 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 A0A0D9SG52 128 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 KIR2DL5BA0A0G2JN68 375 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 KIR2DL5BA0A0G2JPC4 375 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 A0A0J9YX75 114 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 NDUFAF8A1L188 74 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 HMGB3O15347 200 aaKnown RBP4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 C1QBP02746 253 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 OR10J4P0C629 311 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 NBEAP1P0C6P0 100 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 SERF2P84101 59 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 ZNF345Q14585 488 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 ACOT6Q3I5F7 207 aaPredicted RBP4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 C14orf177Q52M58 125 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 TMUB2Q71RG4 321 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 KIR2DL5AQ8N109 375 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 Q8NBF4 154 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 KIR2DL5BQ8NHK3 375 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 LRRC20Q8TCA0 184 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 BLNKQ8WV28 456 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 FXYD5Q96DB9 178 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 SPXQ9BT56 116 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 PSMG3Q9BT73 122 aaPredicted RBP4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 PAXXQ9BUH6 204 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 MRPL32Q9BYC8 188 aaKnown RBP4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 OR51M1Q9H341 326 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 KCNIP2Q9NS61 270 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 RPRMQ9NS64 109 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 RNF24Q9Y225 148 aa4.44□□□□□ -1.7
RTFDC1-209ENST00000487211 A0A1W2PPV4 95 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 A8MTW9 85 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 M0R3E3 92 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 HLA-DRB4P13762 266 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 APOC4P55056 127 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 FXYD7P58549 80 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 RHOBP62745 196 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 ZNF726P1Q15940 193 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 GUK1Q16774 197 aa4.43□□□□□ -1.7
RTFDC1-209ENST00000487211 DEFB135Q30KP9 77 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms