RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 ARPC5LQ9BPX5 153 aa13.25□□□□□ -0.29
CLIP2-206ENST00000487091 Q9H8V8 135 aa13.25□□□□□ -0.29
CLIP2-206ENST00000487091 TP53TG3Q9ULZ0 132 aa13.25□□□□□ -0.29
CLIP2-206ENST00000487091 A0A1W2PPV4 95 aa13.24□□□□□ -0.29
CLIP2-206ENST00000487091 PTTG1O95997 202 aa13.24□□□□□ -0.29
CLIP2-206ENST00000487091 C6orf223Q8N319 242 aa13.24□□□□□ -0.29
CLIP2-206ENST00000487091 ARL6IP6Q8N6S5 226 aa13.24□□□□□ -0.29
CLIP2-206ENST00000487091 TMED6Q8WW62 240 aa13.24□□□□□ -0.29
CLIP2-206ENST00000487091 UPK3BQ9BT76 320 aa13.24□□□□□ -0.29
CLIP2-206ENST00000487091 OTORQ9NRC9 128 aa13.24□□□□□ -0.29
CLIP2-206ENST00000487091 PKD1P98161 4303 aa13.24□□□□□ -0.29
CLIP2-206ENST00000487091 MED14OSP0DP75 135 aa13.23□□□□□ -0.29
CLIP2-206ENST00000487091 ESRGQ1W209 222 aa13.23□□□□□ -0.29
CLIP2-206ENST00000487091 FAM74A1Q5RGS3 127 aa13.23□□□□□ -0.29
CLIP2-206ENST00000487091 VSIG2Q96IQ7 327 aa13.23□□□□□ -0.29
CLIP2-206ENST00000487091 PGPA6NDG6 321 aa13.22□□□□□ -0.29
CLIP2-206ENST00000487091 ZNF415Q09FC8 603 aa13.22□□□□□ -0.29
CLIP2-206ENST00000487091 Q6AWC8 147 aa13.22□□□□□ -0.29
CLIP2-206ENST00000487091 ST6GAL2Q96JF0 529 aa13.22□□□□□ -0.29
CLIP2-206ENST00000487091 EIF3GO75821 320 aaKnown RBP eCLIP13.21□□□□□ -0.29
CLIP2-206ENST00000487091 OR10G4Q8NGN3 311 aa13.21□□□□□ -0.29
CLIP2-206ENST00000487091 OR10G9Q8NGN4 311 aa13.21□□□□□ -0.29
CLIP2-206ENST00000487091 OR10G7Q8NGN6 311 aa13.21□□□□□ -0.29
CLIP2-206ENST00000487091 CMTM2Q8TAZ6 248 aa13.21□□□□□ -0.29
CLIP2-206ENST00000487091 HYLS1Q96M11 299 aa13.21□□□□□ -0.29
CLIP2-206ENST00000487091 MED28Q9H204 178 aa13.21□□□□□ -0.29
CLIP2-206ENST00000487091 MRPS16Q9Y3D3 137 aaKnown RBP13.21□□□□□ -0.29
CLIP2-206ENST00000487091 DNAH11Q96DT5 4516 aa13.2□□□□□ -0.3
CLIP2-206ENST00000487091 A0A096LPF7 62 aa13.2□□□□□ -0.3
CLIP2-206ENST00000487091 RAB2AP61019 212 aa13.2□□□□□ -0.3
CLIP2-206ENST00000487091 TTC32Q5I0X7 151 aa13.2□□□□□ -0.3
CLIP2-206ENST00000487091 OR2G3Q8NGZ4 309 aa13.2□□□□□ -0.3
CLIP2-206ENST00000487091 AQP10Q96PS8 301 aa13.2□□□□□ -0.3
CLIP2-206ENST00000487091 DYNC1H1Q14204 4646 aaKnown RBP13.2□□□□□ -0.3
CLIP2-206ENST00000487091 TNP2Q05952 138 aa13.19□□□□□ -0.3
CLIP2-206ENST00000487091 SLAQ13239 276 aa13.19□□□□□ -0.3
CLIP2-206ENST00000487091 MUC21Q5SSG8 566 aa13.19□□□□□ -0.3
CLIP2-206ENST00000487091 MRPL16Q9NX20 251 aaKnown RBP13.19□□□□□ -0.3
CLIP2-206ENST00000487091 A0A1W2PPQ1 181 aa13.18□□□□□ -0.3
CLIP2-206ENST00000487091 PAX4O43316 350 aa13.18□□□□□ -0.3
CLIP2-206ENST00000487091 FAM159AQ6UWV7 190 aa13.18□□□□□ -0.3
CLIP2-206ENST00000487091 ASB13Q8WXK3 278 aa13.18□□□□□ -0.3
CLIP2-206ENST00000487091 PSMG3Q9BT73 122 aaPredicted RBP13.18□□□□□ -0.3
CLIP2-206ENST00000487091 PRO0255Q9UI72 69 aa13.18□□□□□ -0.3
CLIP2-206ENST00000487091 CDC34P49427 236 aaPredicted RBP13.17□□□□□ -0.3
CLIP2-206ENST00000487091 TDRG1Q3Y452 100 aa13.17□□□□□ -0.3
CLIP2-206ENST00000487091 GOLT1AQ6ZVE7 132 aa13.17□□□□□ -0.3
CLIP2-206ENST00000487091 SPXQ9BT56 116 aa13.17□□□□□ -0.3
CLIP2-206ENST00000487091 MDFICQ9P1T7 246 aa13.17□□□□□ -0.3
CLIP2-206ENST00000487091 RPH3ALQ9UNE2 315 aa13.17□□□□□ -0.3
CLIP2-206ENST00000487091 TRGV11A0A075B6L2 103 aa13.16□□□□□ -0.3
CLIP2-206ENST00000487091 HMGB3O15347 200 aaKnown RBP13.16□□□□□ -0.3
CLIP2-206ENST00000487091 IGHV3-53P01767 116 aa13.16□□□□□ -0.3
CLIP2-206ENST00000487091 MBP02144 154 aa13.16□□□□□ -0.3
CLIP2-206ENST00000487091 STAG3L2P0CL84 134 aa13.16□□□□□ -0.3
CLIP2-206ENST00000487091 STAG3L3P0CL85 134 aa13.16□□□□□ -0.3
CLIP2-206ENST00000487091 BTF3P20290 206 aaKnown RBP13.16□□□□□ -0.3
CLIP2-206ENST00000487091 SERF2P84101 59 aa13.16□□□□□ -0.3
CLIP2-206ENST00000487091 TMEM183BQ1AE95 376 aa13.16□□□□□ -0.3
CLIP2-206ENST00000487091 TMEM183AQ8IXX5 376 aa13.16□□□□□ -0.3
CLIP2-206ENST00000487091 HSD17B11Q8NBQ5 300 aa13.16□□□□□ -0.3
CLIP2-206ENST00000487091 RASL10AQ92737 203 aa13.16□□□□□ -0.3
CLIP2-206ENST00000487091 HHLA3Q9XRX5 114 aa13.16□□□□□ -0.3
CLIP2-206ENST00000487091 ICOSQ9Y6W8 199 aa13.16□□□□□ -0.3
CLIP2-206ENST00000487091 GIPP09681 153 aaPredicted RBP13.15□□□□□ -0.3
CLIP2-206ENST00000487091 ARL14EPLP0DKL9 152 aa13.15□□□□□ -0.3
CLIP2-206ENST00000487091 ATP6V0CP27449 155 aa13.15□□□□□ -0.3
CLIP2-206ENST00000487091 CRYBA4P53673 196 aa13.15□□□□□ -0.3
CLIP2-206ENST00000487091 FHL2Q14192 279 aa13.15□□□□□ -0.3
CLIP2-206ENST00000487091 SUN5Q8TC36 379 aa13.15□□□□□ -0.3
CLIP2-206ENST00000487091 RAB24Q969Q5 203 aa13.15□□□□□ -0.3
CLIP2-206ENST00000487091 KRTAP1-5Q9BYS1 174 aa13.15□□□□□ -0.3
CLIP2-206ENST00000487091 TRAV21A0A0B4J279 112 aa13.14□□□□□ -0.31
CLIP2-206ENST00000487091 SERTM2A0A1B0GWG4 89 aa13.14□□□□□ -0.31
CLIP2-206ENST00000487091 Q5BKY6 102 aa13.14□□□□□ -0.31
CLIP2-206ENST00000487091 ZNF575Q86XF7 245 aa13.14□□□□□ -0.31
CLIP2-206ENST00000487091 IQCF2Q8IXL9 164 aa13.14□□□□□ -0.31
CLIP2-206ENST00000487091 TVP23CQ96ET8 276 aa13.14□□□□□ -0.31
CLIP2-206ENST00000487091 TREM1Q9NP99 234 aa13.14□□□□□ -0.31
CLIP2-206ENST00000487091 GCHFRP30047 84 aa13.13□□□□□ -0.31
CLIP2-206ENST00000487091 KRTAP17-1Q9BYP8 105 aa13.13□□□□□ -0.31
CLIP2-206ENST00000487091 TRAV8-1A0A0A6YYK1 113 aa13.12□□□□□ -0.31
CLIP2-206ENST00000487091 TRGV4A0A0C4DH28 118 aa13.12□□□□□ -0.31
CLIP2-206ENST00000487091 GNG5P63218 68 aa13.12□□□□□ -0.31
CLIP2-206ENST00000487091 MRPL23Q16540 153 aaKnown RBP13.12□□□□□ -0.31
CLIP2-206ENST00000487091 C5orf17Q8NAS9 161 aa13.12□□□□□ -0.31
CLIP2-206ENST00000487091 INO80EQ8NBZ0 244 aaPredicted RBP13.12□□□□□ -0.31
CLIP2-206ENST00000487091 C8orf49Q96NF6 230 aa13.12□□□□□ -0.31
CLIP2-206ENST00000487091 NAGKQ9UJ70 344 aa13.12□□□□□ -0.31
CLIP2-206ENST00000487091 TNFSF18Q9UNG2 199 aa13.12□□□□□ -0.31
CLIP2-206ENST00000487091 SIVA1O15304 175 aa13.11□□□□□ -0.31
CLIP2-206ENST00000487091 ACTR3CQ9C0K3 210 aaPredicted RBP13.11□□□□□ -0.31
CLIP2-206ENST00000487091 TMEM167BQ9NRX6 74 aa13.11□□□□□ -0.31
CLIP2-206ENST00000487091 IGHV3-16A0A0C4DH30 117 aa13.1□□□□□ -0.31
CLIP2-206ENST00000487091 F6UZH7 168 aa13.1□□□□□ -0.31
CLIP2-206ENST00000487091 M0R2P5 195 aa13.1□□□□□ -0.31
CLIP2-206ENST00000487091 GNRH2O43555 120 aa13.1□□□□□ -0.31
CLIP2-206ENST00000487091 CXorf1O96002 111 aa13.1□□□□□ -0.31
CLIP2-206ENST00000487091 TCRAP04437 139 aa13.1□□□□□ -0.31
CLIP2-206ENST00000487091 NEGR1Q7Z3B1 354 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms