RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 IL18Q14116 193 aa2.69□□□□□ -1.98
SNRNP40-205ENST00000486941 PSG3Q16557 428 aa2.69□□□□□ -1.98
SNRNP40-205ENST00000486941 ESRGQ1W209 222 aa2.69□□□□□ -1.98
SNRNP40-205ENST00000486941 TMEM128Q5BJH2 165 aa2.69□□□□□ -1.98
SNRNP40-205ENST00000486941 S100A7AQ86SG5 101 aa2.69□□□□□ -1.98
SNRNP40-205ENST00000486941 RNF182Q8N6D2 247 aa2.69□□□□□ -1.98
SNRNP40-205ENST00000486941 ZNF738Q8NE65 137 aa2.69□□□□□ -1.98
SNRNP40-205ENST00000486941 RNASE8Q8TDE3 154 aaKnown RBP2.69□□□□□ -1.98
SNRNP40-205ENST00000486941 TMEM263Q8WUH6 116 aaKnown RBP2.69□□□□□ -1.98
SNRNP40-205ENST00000486941 RASL10AQ92737 203 aa2.69□□□□□ -1.98
SNRNP40-205ENST00000486941 DIRAS2Q96HU8 199 aa2.69□□□□□ -1.98
SNRNP40-205ENST00000486941 SHANK2-AS3Q9BTD1 123 aa2.69□□□□□ -1.98
SNRNP40-205ENST00000486941 SLC25A39Q9BZJ4 359 aaPredicted RBP2.69□□□□□ -1.98
SNRNP40-205ENST00000486941 NAA50Q9GZZ1 169 aaKnown RBP2.69□□□□□ -1.98
SNRNP40-205ENST00000486941 NOP10Q9NPE3 64 aaKnown RBP2.69□□□□□ -1.98
SNRNP40-205ENST00000486941 PAIP2BQ9ULR5 123 aaKnown RBP2.69□□□□□ -1.98
SNRNP40-205ENST00000486941 RNF24Q9Y225 148 aa2.69□□□□□ -1.98
SNRNP40-205ENST00000486941 HIGD1AQ9Y241 93 aa2.69□□□□□ -1.98
SNRNP40-205ENST00000486941 MRPS16Q9Y3D3 137 aaKnown RBP2.69□□□□□ -1.98
SNRNP40-205ENST00000486941 HERC1Q15751 4861 aa2.68□□□□□ -1.98
SNRNP40-205ENST00000486941 A0A0J9YY99 117 aa2.68□□□□□ -1.98
SNRNP40-205ENST00000486941 K7EPK0 472 aa2.68□□□□□ -1.98
SNRNP40-205ENST00000486941 WRBO00258 174 aa2.68□□□□□ -1.98
SNRNP40-205ENST00000486941 RLN2P04090 185 aa2.68□□□□□ -1.98
SNRNP40-205ENST00000486941 IL5P05113 134 aa2.68□□□□□ -1.98
SNRNP40-205ENST00000486941 INAFM2P0DMQ5 153 aa2.68□□□□□ -1.98
SNRNP40-205ENST00000486941 CXCL2P19875 107 aa2.68□□□□□ -1.98
SNRNP40-205ENST00000486941 AKR1C1Q04828 323 aa2.68□□□□□ -1.98
SNRNP40-205ENST00000486941 SMUG1Q53HV7 270 aa2.68□□□□□ -1.98
SNRNP40-205ENST00000486941 SPANXN5Q5MJ07 72 aa2.68□□□□□ -1.98
SNRNP40-205ENST00000486941 Q6ZRN7 208 aaPredicted RBP2.68□□□□□ -1.98
SNRNP40-205ENST00000486941 CYP2G1PQ6ZSU1 146 aa2.68□□□□□ -1.98
SNRNP40-205ENST00000486941 ACOT7LQ6ZUV0 252 aa2.68□□□□□ -1.98
SNRNP40-205ENST00000486941 LYPD1Q8N2G4 141 aa2.68□□□□□ -1.98
SNRNP40-205ENST00000486941 LRRC20Q8TCA0 184 aa2.68□□□□□ -1.98
SNRNP40-205ENST00000486941 RPUSD4Q96CM3 377 aaKnown RBP2.68□□□□□ -1.98
SNRNP40-205ENST00000486941 SLC25A21Q9BQT8 299 aaPredicted RBP2.68□□□□□ -1.98
SNRNP40-205ENST00000486941 MCUBQ9NWR8 336 aa2.68□□□□□ -1.98
SNRNP40-205ENST00000486941 ZNF586Q9NXT0 402 aa2.68□□□□□ -1.98
SNRNP40-205ENST00000486941 RSL24D1Q9UHA3 163 aaKnown RBP2.68□□□□□ -1.98
SNRNP40-205ENST00000486941 STRAPQ9Y3F4 350 aaKnown RBP2.68□□□□□ -1.98
SNRNP40-205ENST00000486941 SNURFLB1AK76 121 aa2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 FNDC10F2Z333 226 aa2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 PHOX2AO14813 284 aa2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 MRPS12O15235 138 aaKnown RBP2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 SIVA1O15304 175 aa2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 SFT2D2O95562 160 aa2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 OR5G3P0C626 314 aa2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 LINC00869P0C866 280 aa2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 FAUP35544 74 aaKnown RBP2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 XGP55808 180 aa2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 LINC00315P59091 139 aa2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 DLK1P80370 383 aa2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 DAZ2Q13117 558 aaKnown RBP2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 LCN15Q6UWW0 184 aa2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 PATE2Q6UY27 113 aa2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 TMED4Q7Z7H5 227 aa2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 DYNC2LI1Q8TCX1 351 aa2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 DEDD2Q8WXF8 326 aa2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 VSIG2Q96IQ7 327 aa2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 SMIM8Q96KF7 97 aa2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 C18orf15Q96N68 181 aa2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 ODF3Q96PU9 254 aa2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 SLC50A1Q9BRV3 221 aa2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 ARV1Q9H2C2 271 aa2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 NPVFQ9HCQ7 196 aa2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 ZNF331Q9NQX6 463 aaPredicted RBP2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 PSENENQ9NZ42 101 aa2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 CCDC59Q9P031 241 aaKnown RBP2.67□□□□□ -1.98
SNRNP40-205ENST00000486941 A0A096LPF7 62 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 SMCO3A2RU48 225 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 FABP12A6NFH5 140 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 H3BP45 60 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 K7EP13 123 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 GOSR2O14653 212 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 IFNA5P01569 189 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 SMIM18P0DKX4 95 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 LEPP41159 167 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 TMBIM6P55061 237 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 AP3S2P59780 193 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 UBE2MP61081 183 aaKnown RBP2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 POLR2GP62487 172 aaKnown RBP eCLIP2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 PPP1R1AQ13522 171 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 GUK1Q16774 197 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 TMEM14EPQ6UXP3 125 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 Q6ZTI0 123 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 LINC00305Q7Z4B0 112 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 BPIFA4PQ86YQ2 179 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 TOMM5Q8N4H5 51 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 C11orf72Q8NBR9 251 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 ZNF680Q8NEM1 530 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 OR10P1Q8NGE3 313 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 ZNF431Q8TF32 576 aaPredicted RBP2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 RAB2BQ8WUD1 216 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 FRZBQ92765 325 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 SAT2Q96F10 170 aaPredicted RBP2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 BCL7BQ9BQE9 202 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 LINC00467Q9BRT7 94 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 GGACTQ9BVM4 153 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 PARD6GQ9BYG4 376 aaPredicted RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms