RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 TNFRSF6BO95407 300 aa9.64□□□□□ -0.87
HSPG2-211ENST00000486901 CRYGBP07316 175 aa9.64□□□□□ -0.87
HSPG2-211ENST00000486901 TSSC4Q9Y5U2 329 aaPredicted RBP9.64□□□□□ -0.87
HSPG2-211ENST00000486901 ZNF462Q96JM2 2506 aa9.64□□□□□ -0.87
HSPG2-211ENST00000486901 LGALS9BQ3B8N2 356 aa9.64□□□□□ -0.87
HSPG2-211ENST00000486901 LGALS9CQ6DKI2 356 aa9.64□□□□□ -0.87
HSPG2-211ENST00000486901 RAXQ9Y2V3 346 aa9.64□□□□□ -0.87
HSPG2-211ENST00000486901 CRYBG3Q68DQ2 2970 aa9.64□□□□□ -0.87
HSPG2-211ENST00000486901 TRBV25-1A0A075B6N4 114 aa9.64□□□□□ -0.87
HSPG2-211ENST00000486901 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.64□□□□□ -0.87
HSPG2-211ENST00000486901 MAP1LC3AQ9H492 121 aa9.64□□□□□ -0.87
HSPG2-211ENST00000486901 CSMD2Q7Z408 3487 aa9.63□□□□□ -0.87
HSPG2-211ENST00000486901 ATP5G2Q06055 141 aa9.63□□□□□ -0.87
HSPG2-211ENST00000486901 HIF1ANQ9NWT6 349 aa9.63□□□□□ -0.87
HSPG2-211ENST00000486901 AZU1P20160 251 aa9.63□□□□□ -0.87
HSPG2-211ENST00000486901 ZNF562Q6V9R5 426 aa9.63□□□□□ -0.87
HSPG2-211ENST00000486901 ASCL5Q7RTU5 278 aa9.63□□□□□ -0.87
HSPG2-211ENST00000486901 LINC00311Q8N616 119 aa9.63□□□□□ -0.87
HSPG2-211ENST00000486901 FAM57AQ8TBR7 257 aa9.63□□□□□ -0.87
HSPG2-211ENST00000486901 CFHR4Q92496 578 aa9.63□□□□□ -0.87
HSPG2-211ENST00000486901 TMEM14CQ9P0S9 112 aa9.63□□□□□ -0.87
HSPG2-211ENST00000486901 NEGR1Q7Z3B1 354 aa9.63□□□□□ -0.87
HSPG2-211ENST00000486901 C21orf62Q9NYP8 219 aa9.63□□□□□ -0.87
HSPG2-211ENST00000486901 SAMD13Q5VXD3 122 aa9.62□□□□□ -0.87
HSPG2-211ENST00000486901 NUP37Q8NFH4 326 aa9.62□□□□□ -0.87
HSPG2-211ENST00000486901 FANCD2OSQ96PS1 177 aa9.62□□□□□ -0.87
HSPG2-211ENST00000486901 NBR2O15453 112 aa9.62□□□□□ -0.87
HSPG2-211ENST00000486901 IGF1P05019 195 aa9.62□□□□□ -0.87
HSPG2-211ENST00000486901 ODF1Q14990 250 aa9.62□□□□□ -0.87
HSPG2-211ENST00000486901 DTX2Q86UW9 622 aa9.62□□□□□ -0.87
HSPG2-211ENST00000486901 SMAD5-AS1Q9Y6J3 95 aa9.62□□□□□ -0.87
HSPG2-211ENST00000486901 SHISA9B4DS77 424 aa9.62□□□□□ -0.87
HSPG2-211ENST00000486901 MRPS12O15235 138 aaKnown RBP9.62□□□□□ -0.87
HSPG2-211ENST00000486901 RNF185Q96GF1 192 aa9.62□□□□□ -0.87
HSPG2-211ENST00000486901 HIST1H4GQ99525 98 aa9.62□□□□□ -0.87
HSPG2-211ENST00000486901 C11orf21Q9P2W6 132 aa9.62□□□□□ -0.87
HSPG2-211ENST00000486901 CYSLTR1Q9Y271 337 aa9.62□□□□□ -0.87
HSPG2-211ENST00000486901 IGKCP01834 107 aa9.61□□□□□ -0.87
HSPG2-211ENST00000486901 SMIM17P0DL12 118 aa9.61□□□□□ -0.87
HSPG2-211ENST00000486901 MFAP4P55083 255 aa9.61□□□□□ -0.87
HSPG2-211ENST00000486901 C16orf54Q6UWD8 224 aa9.61□□□□□ -0.87
HSPG2-211ENST00000486901 GLMPQ8WWB7 406 aa9.61□□□□□ -0.87
HSPG2-211ENST00000486901 M0R381 172 aa9.61□□□□□ -0.87
HSPG2-211ENST00000486901 HOXB4P17483 251 aaPredicted RBP9.61□□□□□ -0.87
HSPG2-211ENST00000486901 TMEM30BQ3MIR4 351 aa9.61□□□□□ -0.87
HSPG2-211ENST00000486901 Q6ZS92 163 aa9.61□□□□□ -0.87
HSPG2-211ENST00000486901 HHLA3Q9XRX5 114 aa9.61□□□□□ -0.87
HSPG2-211ENST00000486901 C3orf36Q3SXR2 165 aa9.6□□□□□ -0.87
HSPG2-211ENST00000486901 OR4X2Q8NGF9 303 aa9.6□□□□□ -0.87
HSPG2-211ENST00000486901 OR9G4Q8NGQ1 327 aa9.6□□□□□ -0.87
HSPG2-211ENST00000486901 COL25A1Q9BXS0 654 aaPredicted RBP9.6□□□□□ -0.87
HSPG2-211ENST00000486901 LINC01548A6NM66 108 aa9.6□□□□□ -0.87
HSPG2-211ENST00000486901 G3V318 75 aa9.6□□□□□ -0.87
HSPG2-211ENST00000486901 TNFRSF13BO14836 293 aaPredicted RBP9.6□□□□□ -0.87
HSPG2-211ENST00000486901 CLEC3BP05452 202 aa9.6□□□□□ -0.87
HSPG2-211ENST00000486901 FN1P02751 2386 aaKnown RBP9.59□□□□□ -0.87
HSPG2-211ENST00000486901 F8W735 103 aaPredicted RBP9.59□□□□□ -0.87
HSPG2-211ENST00000486901 H3BVH4 76 aa9.59□□□□□ -0.87
HSPG2-211ENST00000486901 IGHG4P01861 327 aa9.59□□□□□ -0.87
HSPG2-211ENST00000486901 CLEC19AQ6UXS0 136 aa9.59□□□□□ -0.87
HSPG2-211ENST00000486901 SPANXN1Q5VSR9 72 aa9.59□□□□□ -0.87
HSPG2-211ENST00000486901 ZNF493Q6ZR52 646 aa9.59□□□□□ -0.87
HSPG2-211ENST00000486901 ZNF575Q86XF7 245 aa9.59□□□□□ -0.87
HSPG2-211ENST00000486901 NACAE9PAV3 2078 aa9.59□□□□□ -0.87
HSPG2-211ENST00000486901 SCGB2A2Q13296 93 aa9.59□□□□□ -0.87
HSPG2-211ENST00000486901 ZNF479Q96JC4 524 aa9.59□□□□□ -0.87
HSPG2-211ENST00000486901 PVRIGQ6DKI7 326 aa9.58□□□□□ -0.88
HSPG2-211ENST00000486901 DPM3Q9P2X0 92 aa9.58□□□□□ -0.88
HSPG2-211ENST00000486901 CTSGP08311 255 aa9.58□□□□□ -0.88
HSPG2-211ENST00000486901 ZNF672Q499Z4 452 aaPredicted RBP9.58□□□□□ -0.88
HSPG2-211ENST00000486901 IGKV3D-20A0A0C4DH25 116 aa9.58□□□□□ -0.88
HSPG2-211ENST00000486901 RPL11P62913 178 aaKnown RBP9.58□□□□□ -0.88
HSPG2-211ENST00000486901 C5orf64Q2M2E5 130 aa9.58□□□□□ -0.88
HSPG2-211ENST00000486901 C15orf32Q32M92 178 aa9.58□□□□□ -0.88
HSPG2-211ENST00000486901 ZNF418Q8TF45 676 aaPredicted RBP9.58□□□□□ -0.88
HSPG2-211ENST00000486901 LOC107984156A0A0G2JMH3 177 aa9.57□□□□□ -0.88
HSPG2-211ENST00000486901 FABP5P3A8MUU1 101 aa9.57□□□□□ -0.88
HSPG2-211ENST00000486901 RPL7P18124 248 aaKnown RBP9.57□□□□□ -0.88
HSPG2-211ENST00000486901 Q6AWC8 147 aa9.57□□□□□ -0.88
HSPG2-211ENST00000486901 ARL17AQ8IVW1 177 aa9.57□□□□□ -0.88
HSPG2-211ENST00000486901 PTH2Q96A98 100 aa9.57□□□□□ -0.88
HSPG2-211ENST00000486901 DPM2O94777 84 aa9.57□□□□□ -0.88
HSPG2-211ENST00000486901 CD3EP07766 207 aa9.57□□□□□ -0.88
HSPG2-211ENST00000486901 MGPP08493 103 aa9.57□□□□□ -0.88
HSPG2-211ENST00000486901 PAX8Q06710 450 aa9.57□□□□□ -0.88
HSPG2-211ENST00000486901 VKORC1Q9BQB6 163 aa9.57□□□□□ -0.88
HSPG2-211ENST00000486901 KLHL30-AS1Q8NEE0 82 aa9.57□□□□□ -0.88
HSPG2-211ENST00000486901 APOMO95445 188 aa9.56□□□□□ -0.88
HSPG2-211ENST00000486901 SRD5A1P18405 259 aa9.56□□□□□ -0.88
HSPG2-211ENST00000486901 BMI1P35226 326 aa9.56□□□□□ -0.88
HSPG2-211ENST00000486901 RPS20P60866 119 aaKnown RBP9.56□□□□□ -0.88
HSPG2-211ENST00000486901 ZNF502Q8TBZ5 544 aa9.56□□□□□ -0.88
HSPG2-211ENST00000486901 MYOZ3Q8TDC0 251 aa9.56□□□□□ -0.88
HSPG2-211ENST00000486901 AGPAT4-IT1Q9H0P7 198 aa9.56□□□□□ -0.88
HSPG2-211ENST00000486901 UBTD1Q9HAC8 227 aa9.56□□□□□ -0.88
HSPG2-211ENST00000486901 U3KQK5 164 aa9.56□□□□□ -0.88
HSPG2-211ENST00000486901 A0A1B0GWB2 263 aa9.56□□□□□ -0.88
HSPG2-211ENST00000486901 TCF15Q12870 199 aa9.56□□□□□ -0.88
HSPG2-211ENST00000486901 RPL39LQ96EH5 51 aaKnown RBP9.56□□□□□ -0.88
HSPG2-211ENST00000486901 DOPEY1Q5JWR5 2465 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms