RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 DCTN5Q9BTE1 182 aa4.07□□□□□ -1.76
COPS3-209ENST00000486810 SLC25A15Q9Y619 301 aa4.07□□□□□ -1.76
COPS3-209ENST00000486810 NHSQ6T4R5 1651 aa4.06□□□□□ -1.76
COPS3-209ENST00000486810 THADAQ6YHU6 1953 aa4.06□□□□□ -1.76
COPS3-209ENST00000486810 TRBV20OR9-2A0A075B6H5 130 aa4.06□□□□□ -1.76
COPS3-209ENST00000486810 NGFP01138 241 aa4.06□□□□□ -1.76
COPS3-209ENST00000486810 ZNF883P0CG24 379 aa4.06□□□□□ -1.76
COPS3-209ENST00000486810 MGST1P10620 155 aaKnown RBP4.06□□□□□ -1.76
COPS3-209ENST00000486810 CD59P13987 128 aa4.06□□□□□ -1.76
COPS3-209ENST00000486810 COX5AP20674 150 aa4.06□□□□□ -1.76
COPS3-209ENST00000486810 PCBD1P61457 104 aa4.06□□□□□ -1.76
COPS3-209ENST00000486810 ADIGQ0VDE8 80 aa4.06□□□□□ -1.76
COPS3-209ENST00000486810 KRTAP27-1Q3LI81 207 aa4.06□□□□□ -1.76
COPS3-209ENST00000486810 C14orf177Q52M58 125 aa4.06□□□□□ -1.76
COPS3-209ENST00000486810 ORMDL2Q53FV1 153 aa4.06□□□□□ -1.76
COPS3-209ENST00000486810 FAM104BQ5XKR9 115 aa4.06□□□□□ -1.76
COPS3-209ENST00000486810 ZFP2Q6ZN57 461 aa4.06□□□□□ -1.76
COPS3-209ENST00000486810 LYZL2Q7Z4W2 148 aa4.06□□□□□ -1.76
COPS3-209ENST00000486810 KRTAP7-1Q8IUC3 87 aa4.06□□□□□ -1.76
COPS3-209ENST00000486810 RPRMLQ8N4K4 120 aa4.06□□□□□ -1.76
COPS3-209ENST00000486810 ZNF525Q8N782 197 aa4.06□□□□□ -1.76
COPS3-209ENST00000486810 TAF15Q92804 592 aaKnown RBP eCLIP4.06□□□□□ -1.76
COPS3-209ENST00000486810 DEPPQ9NTK1 212 aa4.06□□□□□ -1.76
COPS3-209ENST00000486810 ZNF492Q9P255 531 aa4.06□□□□□ -1.76
COPS3-209ENST00000486810 PLXNA2O75051 1894 aa4.06□□□□□ -1.76
COPS3-209ENST00000486810 PLXNB2O15031 1838 aa4.05□□□□□ -1.76
COPS3-209ENST00000486810 A0A087X002 238 aa4.05□□□□□ -1.76
COPS3-209ENST00000486810 TRBV27A0A0K0K1C4 114 aa4.05□□□□□ -1.76
COPS3-209ENST00000486810 TRBV10-2A0A0K0K1G8 114 aa4.05□□□□□ -1.76
COPS3-209ENST00000486810 A0A1B0GXF2 115 aa4.05□□□□□ -1.76
COPS3-209ENST00000486810 WI2-2373I1.2A0A1W2PRP0 233 aa4.05□□□□□ -1.76
COPS3-209ENST00000486810 H3BMM0 161 aa4.05□□□□□ -1.76
COPS3-209ENST00000486810 HBDP02042 147 aa4.05□□□□□ -1.76
COPS3-209ENST00000486810 SLC25A16P16260 332 aa4.05□□□□□ -1.76
COPS3-209ENST00000486810 LGALS3P17931 250 aaKnown RBP4.05□□□□□ -1.76
COPS3-209ENST00000486810 RPL34P49207 117 aaKnown RBP4.05□□□□□ -1.76
COPS3-209ENST00000486810 PAX8Q06710 450 aa4.05□□□□□ -1.76
COPS3-209ENST00000486810 TMEM155Q4W5P6 130 aa4.05□□□□□ -1.76
COPS3-209ENST00000486810 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
COPS3-209ENST00000486810 SLC48A1Q6P1K1 146 aa4.05□□□□□ -1.76
COPS3-209ENST00000486810 NDUFA11Q86Y39 141 aa4.05□□□□□ -1.76
COPS3-209ENST00000486810 Q8N2B8 174 aa4.05□□□□□ -1.76
COPS3-209ENST00000486810 UBE2WQ96B02 151 aa4.05□□□□□ -1.76
COPS3-209ENST00000486810 CYSTM1Q9H1C7 97 aa4.05□□□□□ -1.76
COPS3-209ENST00000486810 CXXC4Q9H2H0 198 aa4.05□□□□□ -1.76
COPS3-209ENST00000486810 MYO9BQ13459 2157 aa4.04□□□□□ -1.76
COPS3-209ENST00000486810 DYSFO75923 2080 aa4.04□□□□□ -1.76
COPS3-209ENST00000486810 COL16A1Q07092 1604 aaPredicted RBP4.04□□□□□ -1.76
COPS3-209ENST00000486810 TMEM14DPA8MWL7 114 aa4.04□□□□□ -1.76
COPS3-209ENST00000486810 CCL24O00175 119 aa4.04□□□□□ -1.76
COPS3-209ENST00000486810 SNRPD3P62318 126 aaKnown RBP4.04□□□□□ -1.76
COPS3-209ENST00000486810 LAGE3Q14657 143 aa4.04□□□□□ -1.76
COPS3-209ENST00000486810 ECSCRQ19T08 205 aa4.04□□□□□ -1.76
COPS3-209ENST00000486810 UNQ9165/PRO28630Q6UXU0 137 aa4.04□□□□□ -1.76
COPS3-209ENST00000486810 PHF5AQ7RTV0 110 aaKnown RBP4.04□□□□□ -1.76
COPS3-209ENST00000486810 OR8A1Q8NGG7 326 aa4.04□□□□□ -1.76
COPS3-209ENST00000486810 DCANP1Q8TF63 244 aa4.04□□□□□ -1.76
COPS3-209ENST00000486810 TSACCQ96A04 125 aaPredicted RBP4.04□□□□□ -1.76
COPS3-209ENST00000486810 CNRIP1Q96F85 164 aaPredicted RBP4.04□□□□□ -1.76
COPS3-209ENST00000486810 Q96M85 177 aa4.04□□□□□ -1.76
COPS3-209ENST00000486810 ARRDC1-AS1Q9H2J1 176 aa4.04□□□□□ -1.76
COPS3-209ENST00000486810 FGF22Q9HCT0 170 aa4.04□□□□□ -1.76
COPS3-209ENST00000486810 DYNLRB1Q9NP97 96 aa4.04□□□□□ -1.76
COPS3-209ENST00000486810 TAS2R4Q9NYW5 299 aa4.04□□□□□ -1.76
COPS3-209ENST00000486810 EML6Q6ZMW3 1958 aa4.03□□□□□ -1.76
COPS3-209ENST00000486810 A0A0B4J2C4 111 aa4.03□□□□□ -1.76
COPS3-209ENST00000486810 LOC107984156A0A0G2JMH3 177 aa4.03□□□□□ -1.76
COPS3-209ENST00000486810 IBA57-AS1B1ANH7 110 aa4.03□□□□□ -1.76
COPS3-209ENST00000486810 M0R378 163 aa4.03□□□□□ -1.76
COPS3-209ENST00000486810 PEX7O00628 323 aa4.03□□□□□ -1.76
COPS3-209ENST00000486810 SRSF10O75494 262 aaKnown RBP4.03□□□□□ -1.76
COPS3-209ENST00000486810 SYNJ2BPP57105 145 aa4.03□□□□□ -1.76
COPS3-209ENST00000486810 B3GALT5-AS1P59052 145 aa4.03□□□□□ -1.76
COPS3-209ENST00000486810 HBBP68871 147 aa4.03□□□□□ -1.76
COPS3-209ENST00000486810 CENPWQ5EE01 88 aa4.03□□□□□ -1.76
COPS3-209ENST00000486810 GDF5OSQ5U4N7 250 aa4.03□□□□□ -1.76
COPS3-209ENST00000486810 ZNF497Q6ZNH5 498 aa4.03□□□□□ -1.76
COPS3-209ENST00000486810 COX8CQ7Z4L0 72 aa4.03□□□□□ -1.76
COPS3-209ENST00000486810 ARL17AQ8IVW1 177 aa4.03□□□□□ -1.76
COPS3-209ENST00000486810 C6orf223Q8N319 242 aa4.03□□□□□ -1.76
COPS3-209ENST00000486810 HIST1H4GQ99525 98 aa4.03□□□□□ -1.76
COPS3-209ENST00000486810 WFDC6Q9BQY6 131 aa4.03□□□□□ -1.76
COPS3-209ENST00000486810 GFRA4Q9GZZ7 299 aa4.03□□□□□ -1.76
COPS3-209ENST00000486810 TMEM14AQ9Y6G1 99 aa4.03□□□□□ -1.76
COPS3-209ENST00000486810 MYO7AQ13402 2215 aa4.03□□□□□ -1.76
COPS3-209ENST00000486810 ATG2BQ96BY7 2078 aa4.02□□□□□ -1.77
COPS3-209ENST00000486810 A0A1B0GWA3 101 aa4.02□□□□□ -1.77
COPS3-209ENST00000486810 LINC01549A6NIU2 74 aa4.02□□□□□ -1.77
COPS3-209ENST00000486810 H3BVH4 76 aa4.02□□□□□ -1.77
COPS3-209ENST00000486810 J3QT63 122 aa4.02□□□□□ -1.77
COPS3-209ENST00000486810 UBE2L6O14933 153 aa4.02□□□□□ -1.77
COPS3-209ENST00000486810 NDUFC1O43677 76 aa4.02□□□□□ -1.77
COPS3-209ENST00000486810 LTAP01374 205 aa4.02□□□□□ -1.77
COPS3-209ENST00000486810 IGKV1D-33P01593 117 aa4.02□□□□□ -1.77
COPS3-209ENST00000486810 IGKV1-33P01594 117 aa4.02□□□□□ -1.77
COPS3-209ENST00000486810 CCKP06307 115 aa4.02□□□□□ -1.77
COPS3-209ENST00000486810 MFAP2P55001 183 aa4.02□□□□□ -1.77
COPS3-209ENST00000486810 ATXN8Q156A1 80 aa4.02□□□□□ -1.77
COPS3-209ENST00000486810 ABCA11PQ4W5N1 156 aa4.02□□□□□ -1.77
COPS3-209ENST00000486810 ZNF414Q96IQ9 312 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms