RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 LINC00476Q8WZB0 136 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 METTL26Q96S19 204 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 GNB1LQ9BYB4 327 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 RPRMQ9NS64 109 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 SHPKQ9UHJ6 478 aa5.09□□□□□ -1.59
HDAC3-209ENST00000486618 ZNF736B4DX44 427 aaPredicted RBP5.08□□□□□ -1.6
HDAC3-209ENST00000486618 MCRIP1C9JLW8 97 aa5.08□□□□□ -1.6
HDAC3-209ENST00000486618 GZMBP10144 247 aa5.08□□□□□ -1.6
HDAC3-209ENST00000486618 RBM11P57052 281 aaKnown RBP5.08□□□□□ -1.6
HDAC3-209ENST00000486618 TAS2R46P59540 309 aa5.08□□□□□ -1.6
HDAC3-209ENST00000486618 HLA-DRB3P79483 266 aa5.08□□□□□ -1.6
HDAC3-209ENST00000486618 SLC38A11Q08AI6 406 aa5.08□□□□□ -1.6
HDAC3-209ENST00000486618 TMEM187Q14656 261 aa5.08□□□□□ -1.6
HDAC3-209ENST00000486618 C12orf73Q69YU5 71 aa5.08□□□□□ -1.6
HDAC3-209ENST00000486618 HIST3H2BBQ8N257 126 aa5.08□□□□□ -1.6
HDAC3-209ENST00000486618 EXOC3-AS1Q8N2X6 119 aa5.08□□□□□ -1.6
HDAC3-209ENST00000486618 RHOXF1Q8NHV9 184 aa5.08□□□□□ -1.6
HDAC3-209ENST00000486618 TMEM191AQ9H0A3 160 aa5.08□□□□□ -1.6
HDAC3-209ENST00000486618 CST11Q9H112 138 aa5.08□□□□□ -1.6
HDAC3-209ENST00000486618 BANF2Q9H503 90 aa5.08□□□□□ -1.6
HDAC3-209ENST00000486618 DKK2Q9UBU2 259 aa5.08□□□□□ -1.6
HDAC3-209ENST00000486618 POMPQ9Y244 141 aa5.08□□□□□ -1.6
HDAC3-209ENST00000486618 ZNF257Q9Y2Q1 563 aa5.08□□□□□ -1.6
HDAC3-209ENST00000486618 IGHV7-81A0A0B4J1V7 117 aa5.07□□□□□ -1.6
HDAC3-209ENST00000486618 TCRBV3S1A0A5B6 114 aa5.07□□□□□ -1.6
HDAC3-209ENST00000486618 SNURFLB1AK76 121 aa5.07□□□□□ -1.6
HDAC3-209ENST00000486618 OR9G9P0C7N8 305 aa5.07□□□□□ -1.6
HDAC3-209ENST00000486618 ZNF137PP52743 207 aa5.07□□□□□ -1.6
HDAC3-209ENST00000486618 DAD1P61803 113 aa5.07□□□□□ -1.6
HDAC3-209ENST00000486618 MEIG1Q5JSS6 88 aa5.07□□□□□ -1.6
HDAC3-209ENST00000486618 ZNF660Q6AZW8 331 aaPredicted RBP5.07□□□□□ -1.6
HDAC3-209ENST00000486618 LCN12Q6JVE5 192 aa5.07□□□□□ -1.6
HDAC3-209ENST00000486618 Q6Q795 121 aa5.07□□□□□ -1.6
HDAC3-209ENST00000486618 LINC00596Q86U02 117 aa5.07□□□□□ -1.6
HDAC3-209ENST00000486618 BPIFB6Q8NFQ5 453 aa5.07□□□□□ -1.6
HDAC3-209ENST00000486618 ZNF431Q8TF32 576 aaPredicted RBP5.07□□□□□ -1.6
HDAC3-209ENST00000486618 RBMXL1Q96E39 390 aaKnown RBP5.07□□□□□ -1.6
HDAC3-209ENST00000486618 CIB3Q96Q77 187 aaPredicted RBP5.07□□□□□ -1.6
HDAC3-209ENST00000486618 VAMP8Q9BV40 100 aa5.07□□□□□ -1.6
HDAC3-209ENST00000486618 TM2D2Q9BX73 214 aa5.07□□□□□ -1.6
HDAC3-209ENST00000486618 MRPL32Q9BYC8 188 aaKnown RBP5.07□□□□□ -1.6
HDAC3-209ENST00000486618 ZNF355PQ9NSJ1 428 aa5.07□□□□□ -1.6
HDAC3-209ENST00000486618 ABRACLQ9P1F3 81 aa5.07□□□□□ -1.6
HDAC3-209ENST00000486618 HYDINQ4G0P3 5121 aa5.06□□□□□ -1.6
HDAC3-209ENST00000486618 IGHV3-43A0A0B4J1X8 118 aa5.06□□□□□ -1.6
HDAC3-209ENST00000486618 TRDV1A0A1B0GX56 115 aa5.06□□□□□ -1.6
HDAC3-209ENST00000486618 IRGMA1A4Y4 181 aa5.06□□□□□ -1.6
HDAC3-209ENST00000486618 IFITM10A6NMD0 228 aa5.06□□□□□ -1.6
HDAC3-209ENST00000486618 B4DEV8 164 aa5.06□□□□□ -1.6
HDAC3-209ENST00000486618 H7C1H1 209 aa5.06□□□□□ -1.6
HDAC3-209ENST00000486618 J3QQQ9 107 aa5.06□□□□□ -1.6
HDAC3-209ENST00000486618 SLC17A2O00624 439 aa5.06□□□□□ -1.6
HDAC3-209ENST00000486618 CA2P00918 260 aa5.06□□□□□ -1.6
HDAC3-209ENST00000486618 IGHV3-11P01762 117 aa5.06□□□□□ -1.6
HDAC3-209ENST00000486618 SPINK8P0C7L1 97 aa5.06□□□□□ -1.6
HDAC3-209ENST00000486618 IGLC6P0CF74 106 aa5.06□□□□□ -1.6
HDAC3-209ENST00000486618 IGHV3-43DP0DP04 118 aa5.06□□□□□ -1.6
HDAC3-209ENST00000486618 OR10J1P30954 320 aa5.06□□□□□ -1.6
HDAC3-209ENST00000486618 ZNF93P35789 620 aaPredicted RBP5.06□□□□□ -1.6
HDAC3-209ENST00000486618 ATP5G3P48201 142 aa5.06□□□□□ -1.6
HDAC3-209ENST00000486618 CRIP2P52943 208 aaPredicted RBP5.06□□□□□ -1.6
HDAC3-209ENST00000486618 KHDC3LQ587J8 217 aa5.06□□□□□ -1.6
HDAC3-209ENST00000486618 AMMECR1LQ6DCA0 310 aa5.06□□□□□ -1.6
HDAC3-209ENST00000486618 LCN15Q6UWW0 184 aa5.06□□□□□ -1.6
HDAC3-209ENST00000486618 MAPKAPK5-AS1Q8N8E1 139 aa5.06□□□□□ -1.6
HDAC3-209ENST00000486618 ZNF555Q8NEP9 628 aa5.06□□□□□ -1.6
HDAC3-209ENST00000486618 MRPL20Q9BYC9 149 aaKnown RBP5.06□□□□□ -1.6
HDAC3-209ENST00000486618 FUT9Q9Y231 359 aa5.06□□□□□ -1.6
HDAC3-209ENST00000486618 TRBV19A0A075B6N1 114 aa5.05□□□□□ -1.6
HDAC3-209ENST00000486618 PLAC8L1A1L4L8 177 aa5.05□□□□□ -1.6
HDAC3-209ENST00000486618 PDCD6O75340 191 aa5.05□□□□□ -1.6
HDAC3-209ENST00000486618 NMBP08949 121 aa5.05□□□□□ -1.6
HDAC3-209ENST00000486618 IGLC1P0CG04 106 aa5.05□□□□□ -1.6
HDAC3-209ENST00000486618 P0DMU3 169 aa5.05□□□□□ -1.6
HDAC3-209ENST00000486618 FAM231AP0DMU4 169 aa5.05□□□□□ -1.6
HDAC3-209ENST00000486618 FAM231CP0DMU5 169 aa5.05□□□□□ -1.6
HDAC3-209ENST00000486618 DAZ2Q13117 558 aaKnown RBP5.05□□□□□ -1.6
HDAC3-209ENST00000486618 SRSF9Q13242 221 aaKnown RBP eCLIP5.05□□□□□ -1.6
HDAC3-209ENST00000486618 TMEM183BQ1AE95 376 aa5.05□□□□□ -1.6
HDAC3-209ENST00000486618 MPV17LQ2QL34 196 aa5.05□□□□□ -1.6
HDAC3-209ENST00000486618 PIGYQ3MUY2 71 aa5.05□□□□□ -1.6
HDAC3-209ENST00000486618 Q5XG85 94 aa5.05□□□□□ -1.6
HDAC3-209ENST00000486618 UNQ5815/PRO19632Q6UWF5 114 aa5.05□□□□□ -1.6
HDAC3-209ENST00000486618 LINC00322Q6ZN03 302 aaPredicted RBP5.05□□□□□ -1.6
HDAC3-209ENST00000486618 Q6ZRU5 148 aa5.05□□□□□ -1.6
HDAC3-209ENST00000486618 DAZ4Q86SG3 579 aaKnown RBP5.05□□□□□ -1.6
HDAC3-209ENST00000486618 NPBQ8NG41 125 aa5.05□□□□□ -1.6
HDAC3-209ENST00000486618 UBALD1Q8TB05 177 aa5.05□□□□□ -1.6
HDAC3-209ENST00000486618 OVOL2Q9BRP0 275 aa5.05□□□□□ -1.6
HDAC3-209ENST00000486618 WDR61Q9GZS3 305 aaKnown RBP5.05□□□□□ -1.6
HDAC3-209ENST00000486618 GABARAPL1Q9H0R8 117 aa5.05□□□□□ -1.6
HDAC3-209ENST00000486618 ATG5Q9H1Y0 275 aa5.05□□□□□ -1.6
HDAC3-209ENST00000486618 DAZ1Q9NQZ3 744 aaKnown RBP5.05□□□□□ -1.6
HDAC3-209ENST00000486618 DAZ3Q9NR90 486 aaKnown RBP5.05□□□□□ -1.6
HDAC3-209ENST00000486618 ALMS1Q8TCU4 4167 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 TRAV4A0A0B4J268 109 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 LOC107984640A0A0U1RRK4 108 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 NUPR2A6NF83 97 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 DEDDO75618 318 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 NDUFA3O95167 84 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms