RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 CCDC168Q8NDH2 2452 aa9.05□□□□□ -0.96
PKP4-213ENST00000486254 IGHV4-4A0A075B6R2 117 aa9.04□□□□□ -0.96
PKP4-213ENST00000486254 PCP4L1A6NKN8 68 aa9.04□□□□□ -0.96
PKP4-213ENST00000486254 OR5AL1P0C617 328 aa9.04□□□□□ -0.96
PKP4-213ENST00000486254 MED14OSP0DP75 135 aa9.04□□□□□ -0.96
PKP4-213ENST00000486254 PKIAP61925 76 aa9.04□□□□□ -0.96
PKP4-213ENST00000486254 FAM104BQ5XKR9 115 aa9.04□□□□□ -0.96
PKP4-213ENST00000486254 C10orf99Q6UWK7 81 aa9.04□□□□□ -0.96
PKP4-213ENST00000486254 ZFAND2AQ8N6M9 145 aa9.04□□□□□ -0.96
PKP4-213ENST00000486254 C4orf3Q8WVX3 66 aa9.04□□□□□ -0.96
PKP4-213ENST00000486254 TMEM191AQ9H0A3 160 aa9.04□□□□□ -0.96
PKP4-213ENST00000486254 CSMD1Q96PZ7 3565 aa9.04□□□□□ -0.96
PKP4-213ENST00000486254 TEX15Q9BXT5 2789 aa9.03□□□□□ -0.96
PKP4-213ENST00000486254 TRAV2A0A0B4J234 112 aa9.03□□□□□ -0.96
PKP4-213ENST00000486254 TSTD3H0UI37 97 aa9.03□□□□□ -0.96
PKP4-213ENST00000486254 SNAI2O43623 268 aa9.03□□□□□ -0.96
PKP4-213ENST00000486254 HSBP1O75506 76 aa9.03□□□□□ -0.96
PKP4-213ENST00000486254 ORM1P02763 201 aa9.03□□□□□ -0.96
PKP4-213ENST00000486254 PPBPP02775 128 aa9.03□□□□□ -0.96
PKP4-213ENST00000486254 HOXD3P31249 432 aaPredicted RBP9.03□□□□□ -0.96
PKP4-213ENST00000486254 KLHDC1Q8N7A1 406 aa9.03□□□□□ -0.96
PKP4-213ENST00000486254 NAGKQ9UJ70 344 aa9.03□□□□□ -0.96
PKP4-213ENST00000486254 LAMTOR2Q9Y2Q5 125 aa9.03□□□□□ -0.96
PKP4-213ENST00000486254 MYO9AB2RTY4 2548 aa9.03□□□□□ -0.96
PKP4-213ENST00000486254 TLN2Q9Y4G6 2542 aa9.03□□□□□ -0.96
PKP4-213ENST00000486254 TRAV21A0A0B4J279 112 aa9.03□□□□□ -0.96
PKP4-213ENST00000486254 IGKV3D-20A0A0C4DH25 116 aa9.03□□□□□ -0.96
PKP4-213ENST00000486254 CDPF1Q6NVV7 123 aa9.03□□□□□ -0.96
PKP4-213ENST00000486254 FLNAP21333 2647 aaKnown RBP9.02□□□□□ -0.96
PKP4-213ENST00000486254 UNC79Q9P2D8 2635 aa9.02□□□□□ -0.96
PKP4-213ENST00000486254 IGHV4OR15-8A0A075B7B6 117 aa9.02□□□□□ -0.97
PKP4-213ENST00000486254 A0A087WW49 117 aa9.02□□□□□ -0.97
PKP4-213ENST00000486254 DNAJC9-AS1A6NH13 148 aa9.02□□□□□ -0.97
PKP4-213ENST00000486254 M0QZ24 198 aa9.02□□□□□ -0.97
PKP4-213ENST00000486254 CACNG7P62955 275 aa9.02□□□□□ -0.97
PKP4-213ENST00000486254 TEX43Q6ZNM6 134 aa9.02□□□□□ -0.97
PKP4-213ENST00000486254 NIT1Q86X76 327 aa9.02□□□□□ -0.97
PKP4-213ENST00000486254 CSMD2Q7Z408 3487 aa9.02□□□□□ -0.97
PKP4-213ENST00000486254 MXRA5Q9NR99 2828 aa9.02□□□□□ -0.97
PKP4-213ENST00000486254 C2orf70A6NJV1 201 aa9.01□□□□□ -0.97
PKP4-213ENST00000486254 KLLNB2CW77 178 aa9.01□□□□□ -0.97
PKP4-213ENST00000486254 K7EQG2 157 aa9.01□□□□□ -0.97
PKP4-213ENST00000486254 SNRPD3P62318 126 aaKnown RBP9.01□□□□□ -0.97
PKP4-213ENST00000486254 RPL11P62913 178 aaKnown RBP9.01□□□□□ -0.97
PKP4-213ENST00000486254 ORMDL3Q8N138 153 aa9.01□□□□□ -0.97
PKP4-213ENST00000486254 URB1-AS1Q96HZ7 61 aa9.01□□□□□ -0.97
PKP4-213ENST00000486254 TPPP3Q9BW30 176 aa9.01□□□□□ -0.97
PKP4-213ENST00000486254 C11orf21Q9P2W6 132 aa9.01□□□□□ -0.97
PKP4-213ENST00000486254 TMSB15BA0A087X1C1 80 aa9□□□□□ -0.97
PKP4-213ENST00000486254 KIR2DL5BA0A0G2JN68 375 aa9□□□□□ -0.97
PKP4-213ENST00000486254 KIR2DL5BA0A0G2JPC4 375 aa9□□□□□ -0.97
PKP4-213ENST00000486254 FAM181BA6NEQ2 426 aa9□□□□□ -0.97
PKP4-213ENST00000486254 LINC00614P0C842 121 aa9□□□□□ -0.97
PKP4-213ENST00000486254 KIR2DL5AQ8N109 375 aa9□□□□□ -0.97
PKP4-213ENST00000486254 MS4A6AQ9H2W1 248 aa9□□□□□ -0.97
PKP4-213ENST00000486254 PEMTQ9UBM1 199 aa9□□□□□ -0.97
PKP4-213ENST00000486254 PDZD2O15018 2839 aa9□□□□□ -0.97
PKP4-213ENST00000486254 LINC01619G3V211 115 aa8.99□□□□□ -0.97
PKP4-213ENST00000486254 SCGB1D1O95968 90 aa8.99□□□□□ -0.97
PKP4-213ENST00000486254 RNASE1P07998 156 aaKnown RBP8.99□□□□□ -0.97
PKP4-213ENST00000486254 PRB4P10163 310 aaPredicted RBP8.99□□□□□ -0.97
PKP4-213ENST00000486254 NTF3P20783 257 aa8.99□□□□□ -0.97
PKP4-213ENST00000486254 SYNJ2BPP57105 145 aa8.99□□□□□ -0.97
PKP4-213ENST00000486254 RNASEKQ6P5S7 137 aaKnown RBP8.99□□□□□ -0.97
PKP4-213ENST00000486254 Q6ZSV7 163 aa8.99□□□□□ -0.97
PKP4-213ENST00000486254 DEFB125Q8N687 156 aa8.99□□□□□ -0.97
PKP4-213ENST00000486254 C16orf95Q9H693 158 aa8.99□□□□□ -0.97
PKP4-213ENST00000486254 CRXO43186 299 aaPredicted RBP8.99□□□□□ -0.97
PKP4-213ENST00000486254 TWIST1Q15672 202 aa8.99□□□□□ -0.97
PKP4-213ENST00000486254 PRR9Q5T870 116 aa8.99□□□□□ -0.97
PKP4-213ENST00000486254 HIST2H2BCQ6DN03 193 aa8.99□□□□□ -0.97
PKP4-213ENST00000486254 AP5S1Q9NUS5 200 aa8.99□□□□□ -0.97
PKP4-213ENST00000486254 SONP18583 2426 aaKnown RBP8.98□□□□□ -0.97
PKP4-213ENST00000486254 LINC01546A6NGU7 62 aa8.98□□□□□ -0.97
PKP4-213ENST00000486254 LINC00587B1AMM8 73 aa8.98□□□□□ -0.97
PKP4-213ENST00000486254 M0R2Z0 102 aa8.98□□□□□ -0.97
PKP4-213ENST00000486254 LEPP41159 167 aa8.98□□□□□ -0.97
PKP4-213ENST00000486254 MRPL51Q4U2R6 128 aaKnown RBP8.98□□□□□ -0.97
PKP4-213ENST00000486254 AMN1Q8IY45 258 aa8.98□□□□□ -0.97
PKP4-213ENST00000486254 Q8N976 141 aa8.98□□□□□ -0.97
PKP4-213ENST00000486254 PRELID3AQ96N28 172 aa8.98□□□□□ -0.97
PKP4-213ENST00000486254 SCRT2Q9NQ03 307 aa8.98□□□□□ -0.97
PKP4-213ENST00000486254 A0A0J9YX75 114 aa8.97□□□□□ -0.97
PKP4-213ENST00000486254 A8MTW9 85 aa8.97□□□□□ -0.97
PKP4-213ENST00000486254 D6R8Y8 96 aa8.97□□□□□ -0.97
PKP4-213ENST00000486254 DUSP14O95147 198 aaKnown RBP8.97□□□□□ -0.97
PKP4-213ENST00000486254 NXPH4O95158 308 aa8.97□□□□□ -0.97
PKP4-213ENST00000486254 C3orf79P0CE67 100 aa8.97□□□□□ -0.97
PKP4-213ENST00000486254 PMCHL1Q16048 86 aa8.97□□□□□ -0.97
PKP4-213ENST00000486254 TDRG1Q3Y452 100 aa8.97□□□□□ -0.97
PKP4-213ENST00000486254 TCTEX1D4Q5JR98 221 aa8.97□□□□□ -0.97
PKP4-213ENST00000486254 FOXI2Q6ZQN5 318 aa8.97□□□□□ -0.97
PKP4-213ENST00000486254 SMIM15Q7Z3B0 74 aa8.97□□□□□ -0.97
PKP4-213ENST00000486254 ZNF664Q8N3J9 261 aa8.97□□□□□ -0.97
PKP4-213ENST00000486254 RNF185Q96GF1 192 aa8.97□□□□□ -0.97
PKP4-213ENST00000486254 C20orf144Q9BQM9 153 aa8.97□□□□□ -0.97
PKP4-213ENST00000486254 IGHV1-24A0A0C4DH33 117 aa8.96□□□□□ -0.97
PKP4-213ENST00000486254 BTF3P20290 206 aaKnown RBP8.96□□□□□ -0.97
PKP4-213ENST00000486254 TSPOP30536 169 aa8.96□□□□□ -0.97
PKP4-213ENST00000486254 FHL3Q13643 280 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms