RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 SPATA12Q7Z6I5 190 aa11.83□□□□□ -0.52
SMC4-216ENST00000485645 ZFAND2AQ8N6M9 145 aa11.83□□□□□ -0.52
SMC4-216ENST00000485645 ASB13Q8WXK3 278 aa11.83□□□□□ -0.52
SMC4-216ENST00000485645 PAXXQ9BUH6 204 aa11.83□□□□□ -0.52
SMC4-216ENST00000485645 MRPL32Q9BYC8 188 aaKnown RBP11.83□□□□□ -0.52
SMC4-216ENST00000485645 KRTAP4-5Q9BYR2 181 aa11.83□□□□□ -0.52
SMC4-216ENST00000485645 ZNF492Q9P255 531 aa11.83□□□□□ -0.52
SMC4-216ENST00000485645 IGHV1OR15-1A0A075B7D0 117 aa11.82□□□□□ -0.52
SMC4-216ENST00000485645 C17orf112F2Z3M2 114 aa11.82□□□□□ -0.52
SMC4-216ENST00000485645 IFNA5P01569 189 aa11.82□□□□□ -0.52
SMC4-216ENST00000485645 GIPP09681 153 aaPredicted RBP11.82□□□□□ -0.52
SMC4-216ENST00000485645 BTF3P20290 206 aaKnown RBP11.82□□□□□ -0.52
SMC4-216ENST00000485645 PRR9Q5T870 116 aa11.82□□□□□ -0.52
SMC4-216ENST00000485645 ARPC5LQ9BPX5 153 aa11.82□□□□□ -0.52
SMC4-216ENST00000485645 SMIM3Q9BZL3 60 aa11.82□□□□□ -0.52
SMC4-216ENST00000485645 TP53TG3Q9ULZ0 132 aa11.82□□□□□ -0.52
SMC4-216ENST00000485645 OR10J4P0C629 311 aa11.81□□□□□ -0.52
SMC4-216ENST00000485645 ZNF138P52744 262 aa11.81□□□□□ -0.52
SMC4-216ENST00000485645 SCGB1C1Q8TD33 95 aa11.81□□□□□ -0.52
SMC4-216ENST00000485645 FXYD5Q96DB9 178 aa11.81□□□□□ -0.52
SMC4-216ENST00000485645 ST6GAL2Q96JF0 529 aa11.81□□□□□ -0.52
SMC4-216ENST00000485645 PAX4O43316 350 aa11.8□□□□□ -0.52
SMC4-216ENST00000485645 OR7C2O60412 319 aa11.8□□□□□ -0.52
SMC4-216ENST00000485645 CSN1S1P47710 185 aa11.8□□□□□ -0.52
SMC4-216ENST00000485645 Q6ZQT7 251 aa11.8□□□□□ -0.52
SMC4-216ENST00000485645 PHYHIPLQ96FC7 376 aa11.8□□□□□ -0.52
SMC4-216ENST00000485645 WFDC1Q9HC57 220 aa11.8□□□□□ -0.52
SMC4-216ENST00000485645 MRPL16Q9NX20 251 aaKnown RBP11.8□□□□□ -0.52
SMC4-216ENST00000485645 ICOSQ9Y6W8 199 aa11.8□□□□□ -0.52
SMC4-216ENST00000485645 DNAH5Q8TE73 4624 aa11.79□□□□□ -0.52
SMC4-216ENST00000485645 TRBV7-9A0A0J9YWB2 115 aa11.79□□□□□ -0.52
SMC4-216ENST00000485645 IGHV3-53P01767 116 aa11.79□□□□□ -0.52
SMC4-216ENST00000485645 SLAQ13239 276 aa11.79□□□□□ -0.52
SMC4-216ENST00000485645 Q5BKY6 102 aa11.79□□□□□ -0.52
SMC4-216ENST00000485645 MAPKAPK5-AS1Q8N8E1 139 aa11.79□□□□□ -0.52
SMC4-216ENST00000485645 Q8TAT8 98 aa11.79□□□□□ -0.52
SMC4-216ENST00000485645 AQP10Q96PS8 301 aa11.79□□□□□ -0.52
SMC4-216ENST00000485645 APOBP04114 4563 aaKnown RBP11.79□□□□□ -0.52
SMC4-216ENST00000485645 RBAKDNA6NC62 111 aa11.78□□□□□ -0.52
SMC4-216ENST00000485645 SIVA1O15304 175 aa11.78□□□□□ -0.52
SMC4-216ENST00000485645 RANP62826 216 aaKnown RBP11.78□□□□□ -0.52
SMC4-216ENST00000485645 ZNF415Q09FC8 603 aa11.78□□□□□ -0.52
SMC4-216ENST00000485645 LYPD1Q8N2G4 141 aa11.78□□□□□ -0.52
SMC4-216ENST00000485645 PRO0255Q9UI72 69 aa11.78□□□□□ -0.52
SMC4-216ENST00000485645 LINC00315P59091 139 aa11.77□□□□□ -0.53
SMC4-216ENST00000485645 FFAR4Q5NUL3 377 aa11.77□□□□□ -0.53
SMC4-216ENST00000485645 HHLA3Q9XRX5 114 aa11.77□□□□□ -0.53
SMC4-216ENST00000485645 CRYBA4P53673 196 aa11.76□□□□□ -0.53
SMC4-216ENST00000485645 KRTAP10-2P60368 255 aa11.76□□□□□ -0.53
SMC4-216ENST00000485645 UBE2L3P68036 154 aaKnown RBP11.76□□□□□ -0.53
SMC4-216ENST00000485645 ZNF266Q14584 549 aa11.76□□□□□ -0.53
SMC4-216ENST00000485645 MUC21Q5SSG8 566 aa11.76□□□□□ -0.53
SMC4-216ENST00000485645 NXPH4O95158 308 aa11.75□□□□□ -0.53
SMC4-216ENST00000485645 TAS2R45P59539 299 aa11.75□□□□□ -0.53
SMC4-216ENST00000485645 FHL2Q14192 279 aa11.75□□□□□ -0.53
SMC4-216ENST00000485645 MRPL23Q16540 153 aaKnown RBP11.75□□□□□ -0.53
SMC4-216ENST00000485645 KHDC3LQ587J8 217 aa11.75□□□□□ -0.53
SMC4-216ENST00000485645 OR2T35Q8NGX2 323 aa11.75□□□□□ -0.53
SMC4-216ENST00000485645 C8orf49Q96NF6 230 aa11.75□□□□□ -0.53
SMC4-216ENST00000485645 LENEPQ9Y5L5 61 aa11.75□□□□□ -0.53
SMC4-216ENST00000485645 DIRC3C9JPN6 131 aa11.74□□□□□ -0.53
SMC4-216ENST00000485645 INO80EQ8NBZ0 244 aaPredicted RBP11.74□□□□□ -0.53
SMC4-216ENST00000485645 MDFICQ9P1T7 246 aa11.74□□□□□ -0.53
SMC4-216ENST00000485645 FXYD6-FXYD2A0A087WZ82 144 aa11.73□□□□□ -0.53
SMC4-216ENST00000485645 TRGV4A0A0C4DH28 118 aa11.73□□□□□ -0.53
SMC4-216ENST00000485645 ACOT6Q3I5F7 207 aaPredicted RBP11.73□□□□□ -0.53
SMC4-216ENST00000485645 Q6AWC8 147 aa11.73□□□□□ -0.53
SMC4-216ENST00000485645 LYPD5Q6UWN5 251 aa11.73□□□□□ -0.53
SMC4-216ENST00000485645 FAM159AQ6UWV7 190 aa11.73□□□□□ -0.53
SMC4-216ENST00000485645 NEGR1Q7Z3B1 354 aa11.73□□□□□ -0.53
SMC4-216ENST00000485645 HYLS1Q96M11 299 aa11.73□□□□□ -0.53
SMC4-216ENST00000485645 TNFSF18Q9UNG2 199 aa11.73□□□□□ -0.53
SMC4-216ENST00000485645 TRGV11A0A075B6L2 103 aa11.72□□□□□ -0.53
SMC4-216ENST00000485645 RNF222A6NCQ9 220 aa11.72□□□□□ -0.53
SMC4-216ENST00000485645 G3V3Q6 166 aa11.72□□□□□ -0.53
SMC4-216ENST00000485645 TMEM183BQ1AE95 376 aa11.72□□□□□ -0.53
SMC4-216ENST00000485645 Q6ZRN7 208 aaPredicted RBP11.72□□□□□ -0.53
SMC4-216ENST00000485645 TMEM183AQ8IXX5 376 aa11.72□□□□□ -0.53
SMC4-216ENST00000485645 Q8N1X5 172 aa11.72□□□□□ -0.53
SMC4-216ENST00000485645 SPXQ9BT56 116 aa11.72□□□□□ -0.53
SMC4-216ENST00000485645 SFTA3P0C7M3 94 aa11.71□□□□□ -0.53
SMC4-216ENST00000485645 FAM74A1Q5RGS3 127 aa11.71□□□□□ -0.53
SMC4-216ENST00000485645 IQCF2Q8IXL9 164 aa11.71□□□□□ -0.53
SMC4-216ENST00000485645 HSD17B11Q8NBQ5 300 aa11.71□□□□□ -0.53
SMC4-216ENST00000485645 OR2G3Q8NGZ4 309 aa11.71□□□□□ -0.53
SMC4-216ENST00000485645 CMTM2Q8TAZ6 248 aa11.71□□□□□ -0.53
SMC4-216ENST00000485645 TMED6Q8WW62 240 aa11.71□□□□□ -0.53
SMC4-216ENST00000485645 RASL10AQ92737 203 aa11.71□□□□□ -0.53
SMC4-216ENST00000485645 ZNF479Q96JC4 524 aa11.71□□□□□ -0.53
SMC4-216ENST00000485645 OTORQ9NRC9 128 aa11.71□□□□□ -0.53
SMC4-216ENST00000485645 PGPA6NDG6 321 aa11.7□□□□□ -0.54
SMC4-216ENST00000485645 EREGO14944 169 aa11.7□□□□□ -0.54
SMC4-216ENST00000485645 SRIP30626 198 aa11.7□□□□□ -0.54
SMC4-216ENST00000485645 RAB2AP61019 212 aa11.7□□□□□ -0.54
SMC4-216ENST00000485645 OR10G4Q8NGN3 311 aa11.7□□□□□ -0.54
SMC4-216ENST00000485645 PCNPQ8WW12 178 aaKnown RBP11.7□□□□□ -0.54
SMC4-216ENST00000485645 PSMG3Q9BT73 122 aaPredicted RBP11.7□□□□□ -0.54
SMC4-216ENST00000485645 SCRT2Q9NQ03 307 aa11.7□□□□□ -0.54
SMC4-216ENST00000485645 RPH3ALQ9UNE2 315 aa11.7□□□□□ -0.54
SMC4-216ENST00000485645 TRAV9-2A0A087WT02 112 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms