RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 AKR1C3P42330 323 aa6□□□□□ -1.45
SF3A1-208ENST00000485618 GNG5P63218 68 aa6□□□□□ -1.45
SF3A1-208ENST00000485618 FLI1Q01543 452 aaPredicted RBP6□□□□□ -1.45
SF3A1-208ENST00000485618 MEF2BQ02080 365 aaPredicted RBP6□□□□□ -1.45
SF3A1-208ENST00000485618 SMUG1Q53HV7 270 aa6□□□□□ -1.45
SF3A1-208ENST00000485618 GFI1BQ5VTD9 330 aa6□□□□□ -1.45
SF3A1-208ENST00000485618 TEX261Q6UWH6 196 aa6□□□□□ -1.45
SF3A1-208ENST00000485618 FAM159AQ6UWV7 190 aa6□□□□□ -1.45
SF3A1-208ENST00000485618 PRNTQ86SH4 94 aa6□□□□□ -1.45
SF3A1-208ENST00000485618 ZNF680Q8NEM1 530 aa6□□□□□ -1.45
SF3A1-208ENST00000485618 C11orf45Q8TAV5 145 aa6□□□□□ -1.45
SF3A1-208ENST00000485618 C16orf74Q96GX8 76 aa6□□□□□ -1.45
SF3A1-208ENST00000485618 BIN3Q9NQY0 253 aa6□□□□□ -1.45
SF3A1-208ENST00000485618 BOLA1Q9Y3E2 137 aa6□□□□□ -1.45
SF3A1-208ENST00000485618 IGHV4-28A0A0C4DH34 117 aa5.99□□□□□ -1.45
SF3A1-208ENST00000485618 A0A0J9YWU9 116 aa5.99□□□□□ -1.45
SF3A1-208ENST00000485618 LCE6AA0A183 80 aa5.99□□□□□ -1.45
SF3A1-208ENST00000485618 LOC102723971A0A1B0GUV8 181 aa5.99□□□□□ -1.45
SF3A1-208ENST00000485618 CBY3A6NI87 242 aa5.99□□□□□ -1.45
SF3A1-208ENST00000485618 SNURFLB1AK76 121 aa5.99□□□□□ -1.45
SF3A1-208ENST00000485618 J3KRW8 73 aa5.99□□□□□ -1.45
SF3A1-208ENST00000485618 CRXO43186 299 aaPredicted RBP5.99□□□□□ -1.45
SF3A1-208ENST00000485618 BCL2P10415 239 aa5.99□□□□□ -1.45
SF3A1-208ENST00000485618 TMEM183BQ1AE95 376 aa5.99□□□□□ -1.45
SF3A1-208ENST00000485618 C1orf158Q8N1D5 194 aa5.99□□□□□ -1.45
SF3A1-208ENST00000485618 Q8TAT8 98 aa5.99□□□□□ -1.45
SF3A1-208ENST00000485618 KCNS1Q96KK3 526 aa5.99□□□□□ -1.45
SF3A1-208ENST00000485618 FAM19A4Q96LR4 140 aa5.99□□□□□ -1.45
SF3A1-208ENST00000485618 LINC00467Q9BRT7 94 aa5.99□□□□□ -1.45
SF3A1-208ENST00000485618 PLA2G2EQ9NZK7 142 aa5.99□□□□□ -1.45
SF3A1-208ENST00000485618 KLF12Q9Y4X4 402 aa5.99□□□□□ -1.45
SF3A1-208ENST00000485618 X6R8D5 127 aa5.99□□□□□ -1.45
SF3A1-208ENST00000485618 TRBV6-1A0A0K0K1D8 114 aa5.98□□□□□ -1.45
SF3A1-208ENST00000485618 RBFOX3A6NFN3 312 aa5.98□□□□□ -1.45
SF3A1-208ENST00000485618 LYRM9A8MSI8 78 aa5.98□□□□□ -1.45
SF3A1-208ENST00000485618 FABP5P3A8MUU1 101 aa5.98□□□□□ -1.45
SF3A1-208ENST00000485618 EMP1P54849 157 aa5.98□□□□□ -1.45
SF3A1-208ENST00000485618 CCL20P78556 96 aa5.98□□□□□ -1.45
SF3A1-208ENST00000485618 ZFAND6Q6FIF0 208 aa5.98□□□□□ -1.45
SF3A1-208ENST00000485618 EIF4E3Q8N5X7 224 aaKnown RBP5.98□□□□□ -1.45
SF3A1-208ENST00000485618 ZFAND2AQ8N6M9 145 aa5.98□□□□□ -1.45
SF3A1-208ENST00000485618 Q8NAQ8 132 aa5.98□□□□□ -1.45
SF3A1-208ENST00000485618 TMEM263Q8WUH6 116 aaKnown RBP5.98□□□□□ -1.45
SF3A1-208ENST00000485618 EIF5A2Q9GZV4 153 aaKnown RBP5.98□□□□□ -1.45
SF3A1-208ENST00000485618 EDA2RQ9HAV5 297 aa5.98□□□□□ -1.45
SF3A1-208ENST00000485618 KLK5Q9Y337 293 aaPredicted RBP5.98□□□□□ -1.45
SF3A1-208ENST00000485618 TIMM8BQ9Y5J9 83 aaPredicted RBP5.98□□□□□ -1.45
SF3A1-208ENST00000485618 HERC2O95714 4834 aa5.97□□□□□ -1.45
SF3A1-208ENST00000485618 TRGV11A0A075B6L2 103 aa5.97□□□□□ -1.45
SF3A1-208ENST00000485618 IGHV1OR15-1A0A075B7D0 117 aa5.97□□□□□ -1.45
SF3A1-208ENST00000485618 TRAV8-1A0A0A6YYK1 113 aa5.97□□□□□ -1.45
SF3A1-208ENST00000485618 ZNF705GA8MUZ8 300 aaPredicted RBP5.97□□□□□ -1.45
SF3A1-208ENST00000485618 NDUFS6O75380 124 aaKnown RBP5.97□□□□□ -1.45
SF3A1-208ENST00000485618 ZNF324O75467 553 aaPredicted RBP5.97□□□□□ -1.45
SF3A1-208ENST00000485618 GCGP01275 180 aa5.97□□□□□ -1.45
SF3A1-208ENST00000485618 PFN1P07737 140 aaKnown RBP5.97□□□□□ -1.45
SF3A1-208ENST00000485618 ATP5G3P48201 142 aa5.97□□□□□ -1.45
SF3A1-208ENST00000485618 BTN1A1Q13410 526 aa5.97□□□□□ -1.45
SF3A1-208ENST00000485618 PEA15Q15121 130 aa5.97□□□□□ -1.45
SF3A1-208ENST00000485618 ANXA2RQ3ZCQ2 193 aa5.97□□□□□ -1.45
SF3A1-208ENST00000485618 FAM162BQ5T6X4 162 aa5.97□□□□□ -1.45
SF3A1-208ENST00000485618 Q6AWC8 147 aa5.97□□□□□ -1.45
SF3A1-208ENST00000485618 BAGE2Q86Y30 109 aa5.97□□□□□ -1.45
SF3A1-208ENST00000485618 LYPD6BQ8NI32 183 aa5.97□□□□□ -1.45
SF3A1-208ENST00000485618 SMIM12Q96EX1 92 aa5.97□□□□□ -1.45
SF3A1-208ENST00000485618 SMDT1Q9H4I9 107 aa5.97□□□□□ -1.45
SF3A1-208ENST00000485618 SDF2L1Q9HCN8 221 aa5.97□□□□□ -1.45
SF3A1-208ENST00000485618 MED9Q9NWA0 146 aa5.97□□□□□ -1.45
SF3A1-208ENST00000485618 DNAH1Q9P2D7 4330 aa5.97□□□□□ -1.45
SF3A1-208ENST00000485618 HUWE1Q7Z6Z7 4374 aaKnown RBP5.97□□□□□ -1.45
SF3A1-208ENST00000485618 TRAV34A0A0B4J273 112 aa5.96□□□□□ -1.46
SF3A1-208ENST00000485618 NUPR2A6NF83 97 aa5.96□□□□□ -1.46
SF3A1-208ENST00000485618 TMEM250H0YL14 139 aa5.96□□□□□ -1.46
SF3A1-208ENST00000485618 DEFB4AO15263 64 aa5.96□□□□□ -1.46
SF3A1-208ENST00000485618 LTAP01374 205 aa5.96□□□□□ -1.46
SF3A1-208ENST00000485618 RBMY1A1P0DJD3 496 aaKnown RBP5.96□□□□□ -1.46
SF3A1-208ENST00000485618 RBMY1CP0DJD4 496 aa5.96□□□□□ -1.46
SF3A1-208ENST00000485618 PRB4P10163 310 aaPredicted RBP5.96□□□□□ -1.46
SF3A1-208ENST00000485618 ZNF415Q09FC8 603 aa5.96□□□□□ -1.46
SF3A1-208ENST00000485618 RBMY1FQ15415 496 aaKnown RBP5.96□□□□□ -1.46
SF3A1-208ENST00000485618 ZNF767PQ75MW2 155 aa5.96□□□□□ -1.46
SF3A1-208ENST00000485618 Q86TA4 180 aa5.96□□□□□ -1.46
SF3A1-208ENST00000485618 TMEM183AQ8IXX5 376 aa5.96□□□□□ -1.46
SF3A1-208ENST00000485618 C11orf52Q96A22 123 aa5.96□□□□□ -1.46
SF3A1-208ENST00000485618 DAZAP1Q96EP5 407 aaKnown RBP5.96□□□□□ -1.46
SF3A1-208ENST00000485618 SGK494Q96LW2 274 aa5.96□□□□□ -1.46
SF3A1-208ENST00000485618 LINC00479Q96M42 142 aa5.96□□□□□ -1.46
SF3A1-208ENST00000485618 NAGKQ9UJ70 344 aa5.96□□□□□ -1.46
SF3A1-208ENST00000485618 SCO2A0A1W2PP80 73 aa5.95□□□□□ -1.46
SF3A1-208ENST00000485618 IGLV2-11P01706 119 aa5.95□□□□□ -1.46
SF3A1-208ENST00000485618 ORM1P02763 201 aa5.95□□□□□ -1.46
SF3A1-208ENST00000485618 S100A4P26447 101 aaKnown RBP5.95□□□□□ -1.46
SF3A1-208ENST00000485618 RPL35P42766 123 aaKnown RBP5.95□□□□□ -1.46
SF3A1-208ENST00000485618 GNG4P50150 75 aa5.95□□□□□ -1.46
SF3A1-208ENST00000485618 DAD1P61803 113 aa5.95□□□□□ -1.46
SF3A1-208ENST00000485618 DAZ2Q13117 558 aaKnown RBP5.95□□□□□ -1.46
SF3A1-208ENST00000485618 TDRG1Q3Y452 100 aa5.95□□□□□ -1.46
SF3A1-208ENST00000485618 ZNF506Q5JVG8 444 aa5.95□□□□□ -1.46
SF3A1-208ENST00000485618 IBA57Q5T440 356 aaKnown RBP5.95□□□□□ -1.46
SF3A1-208ENST00000485618 COX8CQ7Z4L0 72 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms