RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 SMUG1Q53HV7 270 aa12.83□□□□□ -0.36
CHMP3-207ENST00000485465 GFI1BQ5VTD9 330 aa12.83□□□□□ -0.36
CHMP3-207ENST00000485465 TMEM183AQ8IXX5 376 aa12.83□□□□□ -0.36
CHMP3-207ENST00000485465 TRBV20OR9-2A0A075B6H5 130 aa12.82□□□□□ -0.36
CHMP3-207ENST00000485465 C7orf71A4D174 169 aa12.82□□□□□ -0.36
CHMP3-207ENST00000485465 ZNF727A8MUV8 499 aa12.82□□□□□ -0.36
CHMP3-207ENST00000485465 C9JCJ5 164 aa12.82□□□□□ -0.36
CHMP3-207ENST00000485465 INSP01308 110 aa12.82□□□□□ -0.36
CHMP3-207ENST00000485465 BTN1A1Q13410 526 aa12.82□□□□□ -0.36
CHMP3-207ENST00000485465 SOHLH1Q5JUK2 328 aa12.82□□□□□ -0.36
CHMP3-207ENST00000485465 COX8CQ7Z4L0 72 aa12.82□□□□□ -0.36
CHMP3-207ENST00000485465 NHLRC2Q8NBF2 726 aa12.82□□□□□ -0.36
CHMP3-207ENST00000485465 CSNK1G2-AS1Q8NCQ2 148 aa12.82□□□□□ -0.36
CHMP3-207ENST00000485465 SMIM7Q9BQ49 75 aa12.82□□□□□ -0.36
CHMP3-207ENST00000485465 MLST8Q9BVC4 326 aa12.82□□□□□ -0.36
CHMP3-207ENST00000485465 IGLV2-8P01709 118 aa12.81□□□□□ -0.36
CHMP3-207ENST00000485465 SFTA3P0C7M3 94 aa12.81□□□□□ -0.36
CHMP3-207ENST00000485465 FAM74A3Q4VXF1 159 aa12.81□□□□□ -0.36
CHMP3-207ENST00000485465 SBSPONQ8IVN8 264 aa12.81□□□□□ -0.36
CHMP3-207ENST00000485465 SMIM12Q96EX1 92 aa12.81□□□□□ -0.36
CHMP3-207ENST00000485465 TRAV12-3A0A0B4J271 114 aa12.8□□□□□ -0.36
CHMP3-207ENST00000485465 GCGP01275 180 aa12.8□□□□□ -0.36
CHMP3-207ENST00000485465 ZNF80P51504 273 aaPredicted RBP12.8□□□□□ -0.36
CHMP3-207ENST00000485465 Q6ZWC4 215 aa12.8□□□□□ -0.36
CHMP3-207ENST00000485465 ZC2HC1AQ96GY0 325 aa12.8□□□□□ -0.36
CHMP3-207ENST00000485465 C20orf144Q9BQM9 153 aa12.8□□□□□ -0.36
CHMP3-207ENST00000485465 MEGF8Q7Z7M0 2845 aa12.79□□□□□ -0.36
CHMP3-207ENST00000485465 PGPEP1LA6NFU8 196 aa12.79□□□□□ -0.36
CHMP3-207ENST00000485465 ZNF324O75467 553 aaPredicted RBP12.79□□□□□ -0.36
CHMP3-207ENST00000485465 RBMY1A1P0DJD3 496 aaKnown RBP12.79□□□□□ -0.36
CHMP3-207ENST00000485465 RBMY1CP0DJD4 496 aa12.79□□□□□ -0.36
CHMP3-207ENST00000485465 RBMY1FQ15415 496 aaKnown RBP12.79□□□□□ -0.36
CHMP3-207ENST00000485465 Q6AWC8 147 aa12.79□□□□□ -0.36
CHMP3-207ENST00000485465 C1orf158Q8N1D5 194 aa12.79□□□□□ -0.36
CHMP3-207ENST00000485465 OCC1Q8TAD7 63 aa12.79□□□□□ -0.36
CHMP3-207ENST00000485465 TRAV21A0A0B4J279 112 aa12.78□□□□□ -0.36
CHMP3-207ENST00000485465 TMEM218A2RU14 115 aa12.78□□□□□ -0.36
CHMP3-207ENST00000485465 MGST1P10620 155 aaKnown RBP12.78□□□□□ -0.36
CHMP3-207ENST00000485465 CRIP1P50238 77 aa12.78□□□□□ -0.36
CHMP3-207ENST00000485465 DEFB135Q30KP9 77 aa12.78□□□□□ -0.36
CHMP3-207ENST00000485465 Q6ZQT7 251 aa12.78□□□□□ -0.36
CHMP3-207ENST00000485465 RCHY1Q96PM5 261 aa12.78□□□□□ -0.36
CHMP3-207ENST00000485465 NIPSNAP3BQ9BS92 247 aa12.78□□□□□ -0.36
CHMP3-207ENST00000485465 GOLT1BQ9Y3E0 138 aa12.78□□□□□ -0.36
CHMP3-207ENST00000485465 LY96Q9Y6Y9 160 aa12.78□□□□□ -0.36
CHMP3-207ENST00000485465 PFN1P07737 140 aaKnown RBP12.77□□□□□ -0.37
CHMP3-207ENST00000485465 NDUFA5Q16718 116 aa12.77□□□□□ -0.37
CHMP3-207ENST00000485465 TMEM241Q24JQ0 296 aa12.77□□□□□ -0.37
CHMP3-207ENST00000485465 TMEM256Q8N2U0 113 aa12.77□□□□□ -0.37
CHMP3-207ENST00000485465 RNF183Q96D59 192 aa12.77□□□□□ -0.37
CHMP3-207ENST00000485465 B9D2Q9BPU9 175 aa12.77□□□□□ -0.37
CHMP3-207ENST00000485465 IGHV3OR16-12A0A075B7B8 117 aa12.76□□□□□ -0.37
CHMP3-207ENST00000485465 FABP5P3A8MUU1 101 aa12.76□□□□□ -0.37
CHMP3-207ENST00000485465 SPRY2O43597 315 aa12.76□□□□□ -0.37
CHMP3-207ENST00000485465 FAM162BQ5T6X4 162 aa12.76□□□□□ -0.37
CHMP3-207ENST00000485465 ZNF705AQ6ZN79 300 aaPredicted RBP12.76□□□□□ -0.37
CHMP3-207ENST00000485465 SLC7A5P1Q8MH63 180 aa12.76□□□□□ -0.37
CHMP3-207ENST00000485465 LINC01587Q99440 93 aa12.76□□□□□ -0.37
CHMP3-207ENST00000485465 TMEM208Q9BTX3 173 aa12.76□□□□□ -0.37
CHMP3-207ENST00000485465 NAT8Q9UHE5 227 aa12.76□□□□□ -0.37
CHMP3-207ENST00000485465 TP53TG1Q9Y2A0 90 aa12.76□□□□□ -0.37
CHMP3-207ENST00000485465 H7BYZ3 331 aa12.75□□□□□ -0.37
CHMP3-207ENST00000485465 K7EN84 100 aa12.75□□□□□ -0.37
CHMP3-207ENST00000485465 SH2D1AO60880 128 aa12.75□□□□□ -0.37
CHMP3-207ENST00000485465 PRR27Q6MZM9 219 aa12.75□□□□□ -0.37
CHMP3-207ENST00000485465 LINC01551Q86U37 167 aa12.75□□□□□ -0.37
CHMP3-207ENST00000485465 TM2D3Q9BRN9 247 aa12.75□□□□□ -0.37
CHMP3-207ENST00000485465 OVOL2Q9BRP0 275 aa12.75□□□□□ -0.37
CHMP3-207ENST00000485465 BIN3Q9NQY0 253 aa12.75□□□□□ -0.37
CHMP3-207ENST00000485465 OR5I1Q13606 314 aa12.74□□□□□ -0.37
CHMP3-207ENST00000485465 PYGO2Q9BRQ0 406 aa12.74□□□□□ -0.37
CHMP3-207ENST00000485465 SDF2L1Q9HCN8 221 aa12.74□□□□□ -0.37
CHMP3-207ENST00000485465 RETNQ9HD89 108 aa12.74□□□□□ -0.37
CHMP3-207ENST00000485465 F8W036 122 aa12.73□□□□□ -0.37
CHMP3-207ENST00000485465 ADCYAP1P18509 176 aa12.73□□□□□ -0.37
CHMP3-207ENST00000485465 RPL23P62829 140 aaKnown RBP12.73□□□□□ -0.37
CHMP3-207ENST00000485465 MUC21Q5SSG8 566 aa12.73□□□□□ -0.37
CHMP3-207ENST00000485465 OR11H2Q8NH07 326 aa12.73□□□□□ -0.37
CHMP3-207ENST00000485465 SPATA25Q9BR10 227 aa12.73□□□□□ -0.37
CHMP3-207ENST00000485465 LINC00467Q9BRT7 94 aa12.73□□□□□ -0.37
CHMP3-207ENST00000485465 C11orf21Q9P2W6 132 aa12.73□□□□□ -0.37
CHMP3-207ENST00000485465 IGHV1OR15-1A0A075B7D0 117 aa12.72□□□□□ -0.37
CHMP3-207ENST00000485465 C19orf71A6NCJ1 209 aa12.72□□□□□ -0.37
CHMP3-207ENST00000485465 FAM159AQ6UWV7 190 aa12.72□□□□□ -0.37
CHMP3-207ENST00000485465 DAZAP1Q96EP5 407 aaKnown RBP12.72□□□□□ -0.37
CHMP3-207ENST00000485465 NEU1Q99519 415 aa12.72□□□□□ -0.37
CHMP3-207ENST00000485465 SEC11CQ9BY50 192 aa12.72□□□□□ -0.37
CHMP3-207ENST00000485465 NAGKQ9UJ70 344 aa12.72□□□□□ -0.37
CHMP3-207ENST00000485465 X6R8D5 127 aa12.72□□□□□ -0.37
CHMP3-207ENST00000485465 ZNF705GA8MUZ8 300 aaPredicted RBP12.71□□□□□ -0.37
CHMP3-207ENST00000485465 PRM2P04554 102 aa12.71□□□□□ -0.37
CHMP3-207ENST00000485465 HTN1P15515 57 aa12.71□□□□□ -0.37
CHMP3-207ENST00000485465 ADIRFQ15847 76 aa12.71□□□□□ -0.37
CHMP3-207ENST00000485465 TDRG1Q3Y452 100 aa12.71□□□□□ -0.37
CHMP3-207ENST00000485465 ANXA2RQ3ZCQ2 193 aa12.71□□□□□ -0.37
CHMP3-207ENST00000485465 SMIM9A6NGZ8 99 aa12.7□□□□□ -0.38
CHMP3-207ENST00000485465 ORM1P02763 201 aa12.7□□□□□ -0.38
CHMP3-207ENST00000485465 C10orf91Q5T1B1 145 aa12.7□□□□□ -0.38
CHMP3-207ENST00000485465 ISOC2Q96AB3 205 aa12.7□□□□□ -0.38
CHMP3-207ENST00000485465 KCNS1Q96KK3 526 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms