RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 KRTAP10-2P60368 255 aa9.01□□□□□ -0.97
HDAC6-227ENST00000485102 ARL6IP6Q8N6S5 226 aa9.01□□□□□ -0.97
HDAC6-227ENST00000485102 MRPL53Q96EL3 112 aaKnown RBP9.01□□□□□ -0.97
HDAC6-227ENST00000485102 PPP1R14DQ9NXH3 145 aa9.01□□□□□ -0.97
HDAC6-227ENST00000485102 TRAV26-1A0A087WT03 109 aa9□□□□□ -0.97
HDAC6-227ENST00000485102 NBEAP1P0C6P0 100 aa9□□□□□ -0.97
HDAC6-227ENST00000485102 STAG3L2P0CL84 134 aa9□□□□□ -0.97
HDAC6-227ENST00000485102 STAG3L3P0CL85 134 aa9□□□□□ -0.97
HDAC6-227ENST00000485102 IGLC2P0DOY2 106 aa9□□□□□ -0.97
HDAC6-227ENST00000485102 CSN1S1P47710 185 aa9□□□□□ -0.97
HDAC6-227ENST00000485102 ESRGQ1W209 222 aa9□□□□□ -0.97
HDAC6-227ENST00000485102 FAM122CQ6P4D5 195 aa9□□□□□ -0.97
HDAC6-227ENST00000485102 RPUSD4Q96CM3 377 aaKnown RBP9□□□□□ -0.97
HDAC6-227ENST00000485102 MRPS16Q9Y3D3 137 aaKnown RBP9□□□□□ -0.97
HDAC6-227ENST00000485102 HTN1P15515 57 aa8.99□□□□□ -0.97
HDAC6-227ENST00000485102 TAGLN2P37802 199 aaKnown RBP8.99□□□□□ -0.97
HDAC6-227ENST00000485102 UBE2L3P68036 154 aaKnown RBP8.99□□□□□ -0.97
HDAC6-227ENST00000485102 OR5I1Q13606 314 aa8.99□□□□□ -0.97
HDAC6-227ENST00000485102 MIR17HGQ75NE6 70 aa8.99□□□□□ -0.97
HDAC6-227ENST00000485102 RAB24Q969Q5 203 aa8.99□□□□□ -0.97
HDAC6-227ENST00000485102 TCEAL7Q9BRU2 100 aa8.99□□□□□ -0.97
HDAC6-227ENST00000485102 SLC25A2Q9BXI2 301 aa8.99□□□□□ -0.97
HDAC6-227ENST00000485102 SH3BGRL3Q9H299 93 aa8.99□□□□□ -0.97
HDAC6-227ENST00000485102 ZNF331Q9NQX6 463 aaPredicted RBP8.99□□□□□ -0.97
HDAC6-227ENST00000485102 ARL2-SNX15V9GYD0 113 aa8.99□□□□□ -0.97
HDAC6-227ENST00000485102 TRBV19A0A075B6N1 114 aa8.98□□□□□ -0.97
HDAC6-227ENST00000485102 SERTM2A0A1B0GWG4 89 aa8.98□□□□□ -0.97
HDAC6-227ENST00000485102 HOXA5P20719 270 aa8.98□□□□□ -0.97
HDAC6-227ENST00000485102 SULT1A2P50226 295 aa8.98□□□□□ -0.97
HDAC6-227ENST00000485102 BLOC1S1P78537 153 aa8.98□□□□□ -0.97
HDAC6-227ENST00000485102 DAZ2Q13117 558 aaKnown RBP8.98□□□□□ -0.97
HDAC6-227ENST00000485102 CCDC28AQ8IWP9 274 aa8.98□□□□□ -0.97
HDAC6-227ENST00000485102 C18orf15Q96N68 181 aa8.98□□□□□ -0.97
HDAC6-227ENST00000485102 PGPEP1Q9NXJ5 209 aa8.98□□□□□ -0.97
HDAC6-227ENST00000485102 FAT1Q14517 4588 aa8.97□□□□□ -0.97
HDAC6-227ENST00000485102 FBLL1A6NHQ2 334 aaKnown RBP8.97□□□□□ -0.97
HDAC6-227ENST00000485102 K7EQM0 130 aa8.97□□□□□ -0.97
HDAC6-227ENST00000485102 IFNA7P01567 189 aa8.97□□□□□ -0.97
HDAC6-227ENST00000485102 H2AFB1P0C5Y9 115 aa8.97□□□□□ -0.97
HDAC6-227ENST00000485102 GCSAMLQ5JQS6 135 aa8.97□□□□□ -0.97
HDAC6-227ENST00000485102 Q6ZRN7 208 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-227ENST00000485102 CMTM2Q8TAZ6 248 aa8.97□□□□□ -0.97
HDAC6-227ENST00000485102 TMED6Q8WW62 240 aa8.97□□□□□ -0.97
HDAC6-227ENST00000485102 FAM167A-AS1Q96KT0 104 aa8.97□□□□□ -0.97
HDAC6-227ENST00000485102 ODF3Q96PU9 254 aa8.97□□□□□ -0.97
HDAC6-227ENST00000485102 TXNDC17Q9BRA2 123 aa8.97□□□□□ -0.97
HDAC6-227ENST00000485102 TRAV5A0A0B4J249 113 aa8.96□□□□□ -0.98
HDAC6-227ENST00000485102 MAP1LC3B2A6NCE7 125 aa8.96□□□□□ -0.98
HDAC6-227ENST00000485102 CD300CQ08708 224 aa8.96□□□□□ -0.98
HDAC6-227ENST00000485102 KIR3DS1Q14943 382 aa8.96□□□□□ -0.98
HDAC6-227ENST00000485102 GFI1BQ5VTD9 330 aa8.96□□□□□ -0.98
HDAC6-227ENST00000485102 FAM213BQ8TBF2 198 aa8.96□□□□□ -0.98
HDAC6-227ENST00000485102 SUN5Q8TC36 379 aa8.96□□□□□ -0.98
HDAC6-227ENST00000485102 MBD3L1Q8WWY6 194 aa8.96□□□□□ -0.98
HDAC6-227ENST00000485102 SAT2Q96F10 170 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-227ENST00000485102 MAP1LC3BQ9GZQ8 125 aa8.96□□□□□ -0.98
HDAC6-227ENST00000485102 TRAV1-1A0A0B4J248 108 aa8.95□□□□□ -0.98
HDAC6-227ENST00000485102 A0A0J9YY99 117 aa8.95□□□□□ -0.98
HDAC6-227ENST00000485102 A0A1W2PRE2 83 aa8.95□□□□□ -0.98
HDAC6-227ENST00000485102 SNURFLB1AK76 121 aa8.95□□□□□ -0.98
HDAC6-227ENST00000485102 EPM2AB3EWF7 344 aa8.95□□□□□ -0.98
HDAC6-227ENST00000485102 F6UZH7 168 aa8.95□□□□□ -0.98
HDAC6-227ENST00000485102 IFNA1P01562 189 aa8.95□□□□□ -0.98
HDAC6-227ENST00000485102 ARL14EPLP0DKL9 152 aa8.95□□□□□ -0.98
HDAC6-227ENST00000485102 GCHFRP30047 84 aa8.95□□□□□ -0.98
HDAC6-227ENST00000485102 SFT2D1Q8WV19 159 aa8.95□□□□□ -0.98
HDAC6-227ENST00000485102 BLNKQ8WV28 456 aa8.95□□□□□ -0.98
HDAC6-227ENST00000485102 FXYD5Q96DB9 178 aa8.95□□□□□ -0.98
HDAC6-227ENST00000485102 PYGO2Q9BRQ0 406 aa8.95□□□□□ -0.98
HDAC6-227ENST00000485102 OTORQ9NRC9 128 aa8.95□□□□□ -0.98
HDAC6-227ENST00000485102 ZNF586Q9NXT0 402 aa8.95□□□□□ -0.98
HDAC6-227ENST00000485102 GAGE12BA1L429 117 aa8.94□□□□□ -0.98
HDAC6-227ENST00000485102 RBAKDNA6NC62 111 aa8.94□□□□□ -0.98
HDAC6-227ENST00000485102 GAGE7O76087 117 aa8.94□□□□□ -0.98
HDAC6-227ENST00000485102 SLC25A5P05141 298 aaKnown RBP8.94□□□□□ -0.98
HDAC6-227ENST00000485102 GAGE12FP0CL80 117 aa8.94□□□□□ -0.98
HDAC6-227ENST00000485102 GAGE12GP0CL81 117 aa8.94□□□□□ -0.98
HDAC6-227ENST00000485102 GAGE12IP0CL82 117 aa8.94□□□□□ -0.98
HDAC6-227ENST00000485102 PYYP10082 97 aa8.94□□□□□ -0.98
HDAC6-227ENST00000485102 FHITP49789 147 aa8.94□□□□□ -0.98
HDAC6-227ENST00000485102 LINC00315P59091 139 aa8.94□□□□□ -0.98
HDAC6-227ENST00000485102 MORN5Q5VZ52 161 aa8.94□□□□□ -0.98
HDAC6-227ENST00000485102 CDPF1Q6NVV7 123 aa8.94□□□□□ -0.98
HDAC6-227ENST00000485102 IQCF2Q8IXL9 164 aa8.94□□□□□ -0.98
HDAC6-227ENST00000485102 VSIG2Q96IQ7 327 aa8.94□□□□□ -0.98
HDAC6-227ENST00000485102 MANBALQ9NQG1 85 aa8.94□□□□□ -0.98
HDAC6-227ENST00000485102 A0A096LPF7 62 aa8.93□□□□□ -0.98
HDAC6-227ENST00000485102 TRBV7-9A0A0J9YWB2 115 aa8.93□□□□□ -0.98
HDAC6-227ENST00000485102 PRAC2D3DTV9 90 aa8.93□□□□□ -0.98
HDAC6-227ENST00000485102 H3BQ15 152 aa8.93□□□□□ -0.98
HDAC6-227ENST00000485102 OR10J4P0C629 311 aa8.93□□□□□ -0.98
HDAC6-227ENST00000485102 LINC00477Q96M19 166 aa8.93□□□□□ -0.98
HDAC6-227ENST00000485102 LINC00467Q9BRT7 94 aa8.93□□□□□ -0.98
HDAC6-227ENST00000485102 SIVA1O15304 175 aa8.92□□□□□ -0.98
HDAC6-227ENST00000485102 CT45A10P0DMU9 189 aa8.92□□□□□ -0.98
HDAC6-227ENST00000485102 LEPP41159 167 aa8.92□□□□□ -0.98
HDAC6-227ENST00000485102 NKX2-5P52952 324 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-227ENST00000485102 XGP55808 180 aa8.92□□□□□ -0.98
HDAC6-227ENST00000485102 RANP62826 216 aaKnown RBP8.92□□□□□ -0.98
HDAC6-227ENST00000485102 Q6ZTI0 123 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms