RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 AAMDCQ9H7C9 122 aa10.56□□□□□ -0.72
HLA-DQB1-208ENST00000484729 WFDC1Q9HC57 220 aa10.56□□□□□ -0.72
HLA-DQB1-208ENST00000484729 IGKV2-40A0A087WW87 121 aaPredicted RBP10.55□□□□□ -0.72
HLA-DQB1-208ENST00000484729 A0A1B0GVG6 124 aa10.55□□□□□ -0.72
HLA-DQB1-208ENST00000484729 KLLNB2CW77 178 aa10.55□□□□□ -0.72
HLA-DQB1-208ENST00000484729 IGKV2D-40P01614 121 aaPredicted RBP10.55□□□□□ -0.72
HLA-DQB1-208ENST00000484729 PDE6HQ13956 83 aa10.55□□□□□ -0.72
HLA-DQB1-208ENST00000484729 ICAM4Q14773 271 aa10.55□□□□□ -0.72
HLA-DQB1-208ENST00000484729 EIF4E3Q8N5X7 224 aaKnown RBP10.55□□□□□ -0.72
HLA-DQB1-208ENST00000484729 C11orf72Q8NBR9 251 aa10.55□□□□□ -0.72
HLA-DQB1-208ENST00000484729 ST6GAL2Q96JF0 529 aa10.55□□□□□ -0.72
HLA-DQB1-208ENST00000484729 LINC00477Q96M19 166 aa10.55□□□□□ -0.72
HLA-DQB1-208ENST00000484729 AGPAT4-IT1Q9H0P7 198 aa10.55□□□□□ -0.72
HLA-DQB1-208ENST00000484729 FUT9Q9Y231 359 aa10.55□□□□□ -0.72
HLA-DQB1-208ENST00000484729 A0A096LPF7 62 aa10.54□□□□□ -0.72
HLA-DQB1-208ENST00000484729 BORCS7-ASMTA0A0B4J1R7 106 aa10.54□□□□□ -0.72
HLA-DQB1-208ENST00000484729 A0A1W2PPQ1 181 aa10.54□□□□□ -0.72
HLA-DQB1-208ENST00000484729 ZNF324O75467 553 aaPredicted RBP10.54□□□□□ -0.72
HLA-DQB1-208ENST00000484729 GPX1P07203 203 aa10.54□□□□□ -0.72
HLA-DQB1-208ENST00000484729 ANXA2RQ3ZCQ2 193 aa10.54□□□□□ -0.72
HLA-DQB1-208ENST00000484729 TMEM78Q5T7P6 136 aa10.54□□□□□ -0.72
HLA-DQB1-208ENST00000484729 FAM122CQ6P4D5 195 aa10.54□□□□□ -0.72
HLA-DQB1-208ENST00000484729 TCTE3Q8IZS6 198 aa10.54□□□□□ -0.72
HLA-DQB1-208ENST00000484729 FRZBQ92765 325 aa10.54□□□□□ -0.72
HLA-DQB1-208ENST00000484729 VSIG2Q96IQ7 327 aa10.54□□□□□ -0.72
HLA-DQB1-208ENST00000484729 FAM19A4Q96LR4 140 aa10.54□□□□□ -0.72
HLA-DQB1-208ENST00000484729 SLC25A2Q9BXI2 301 aa10.54□□□□□ -0.72
HLA-DQB1-208ENST00000484729 MDFICQ9P1T7 246 aa10.54□□□□□ -0.72
HLA-DQB1-208ENST00000484729 KLF12Q9Y4X4 402 aa10.54□□□□□ -0.72
HLA-DQB1-208ENST00000484729 RGS13O14921 159 aa10.53□□□□□ -0.72
HLA-DQB1-208ENST00000484729 CRISP2P16562 243 aa10.53□□□□□ -0.72
HLA-DQB1-208ENST00000484729 TCL1AP56279 114 aa10.53□□□□□ -0.72
HLA-DQB1-208ENST00000484729 FFAR4Q5NUL3 377 aa10.53□□□□□ -0.72
HLA-DQB1-208ENST00000484729 MIR17HGQ75NE6 70 aa10.53□□□□□ -0.72
HLA-DQB1-208ENST00000484729 HSD17B11Q8NBQ5 300 aa10.53□□□□□ -0.72
HLA-DQB1-208ENST00000484729 OR11H4Q8NGC9 324 aa10.53□□□□□ -0.72
HLA-DQB1-208ENST00000484729 C18orf15Q96N68 181 aa10.53□□□□□ -0.72
HLA-DQB1-208ENST00000484729 LINC00467Q9BRT7 94 aa10.53□□□□□ -0.72
HLA-DQB1-208ENST00000484729 HMSDA8MTL9 139 aa10.52□□□□□ -0.73
HLA-DQB1-208ENST00000484729 IGHV3-53P01767 116 aa10.52□□□□□ -0.73
HLA-DQB1-208ENST00000484729 SMR3BP02814 79 aaPredicted RBP10.52□□□□□ -0.73
HLA-DQB1-208ENST00000484729 ZNF345Q14585 488 aa10.52□□□□□ -0.73
HLA-DQB1-208ENST00000484729 PRR9Q5T870 116 aa10.52□□□□□ -0.73
HLA-DQB1-208ENST00000484729 C9orf47Q6ZRZ4 202 aa10.52□□□□□ -0.73
HLA-DQB1-208ENST00000484729 VGLL1Q99990 258 aa10.52□□□□□ -0.73
HLA-DQB1-208ENST00000484729 ARPC5LQ9BPX5 153 aa10.52□□□□□ -0.73
HLA-DQB1-208ENST00000484729 TAAR5O14804 337 aa10.51□□□□□ -0.73
HLA-DQB1-208ENST00000484729 SPINK4O60575 86 aa10.51□□□□□ -0.73
HLA-DQB1-208ENST00000484729 LINC00315P59091 139 aa10.51□□□□□ -0.73
HLA-DQB1-208ENST00000484729 IBA57Q5T440 356 aaKnown RBP10.51□□□□□ -0.73
HLA-DQB1-208ENST00000484729 RPL7L1Q6DKI1 246 aaKnown RBP10.51□□□□□ -0.73
HLA-DQB1-208ENST00000484729 KCNRGQ8N5I3 272 aa10.51□□□□□ -0.73
HLA-DQB1-208ENST00000484729 ZFAND2AQ8N6M9 145 aa10.51□□□□□ -0.73
HLA-DQB1-208ENST00000484729 FAM167A-AS1Q96KT0 104 aa10.51□□□□□ -0.73
HLA-DQB1-208ENST00000484729 OR51M1Q9H341 326 aa10.51□□□□□ -0.73
HLA-DQB1-208ENST00000484729 MRPL16Q9NX20 251 aaKnown RBP10.51□□□□□ -0.73
HLA-DQB1-208ENST00000484729 PGPEP1Q9NXJ5 209 aa10.51□□□□□ -0.73
HLA-DQB1-208ENST00000484729 TP53TG3Q9ULZ0 132 aa10.51□□□□□ -0.73
HLA-DQB1-208ENST00000484729 IGHV1OR15-1A0A075B7D0 117 aa10.5□□□□□ -0.73
HLA-DQB1-208ENST00000484729 A0A0D9SG52 128 aa10.5□□□□□ -0.73
HLA-DQB1-208ENST00000484729 KANTRA0A1W2PQU2 76 aa10.5□□□□□ -0.73
HLA-DQB1-208ENST00000484729 PAX4O43316 350 aa10.5□□□□□ -0.73
HLA-DQB1-208ENST00000484729 PFDN1O60925 122 aa10.5□□□□□ -0.73
HLA-DQB1-208ENST00000484729 C1QBP02746 253 aa10.5□□□□□ -0.73
HLA-DQB1-208ENST00000484729 NMBP08949 121 aa10.5□□□□□ -0.73
HLA-DQB1-208ENST00000484729 OR10J4P0C629 311 aa10.5□□□□□ -0.73
HLA-DQB1-208ENST00000484729 NBEAP1P0C6P0 100 aa10.5□□□□□ -0.73
HLA-DQB1-208ENST00000484729 Q6ZQT7 251 aa10.5□□□□□ -0.73
HLA-DQB1-208ENST00000484729 Q6ZRN7 208 aaPredicted RBP10.5□□□□□ -0.73
HLA-DQB1-208ENST00000484729 Q8TAT8 98 aa10.5□□□□□ -0.73
HLA-DQB1-208ENST00000484729 PAXXQ9BUH6 204 aa10.5□□□□□ -0.73
HLA-DQB1-208ENST00000484729 MRPL32Q9BYC8 188 aaKnown RBP10.5□□□□□ -0.73
HLA-DQB1-208ENST00000484729 ZNF492Q9P255 531 aa10.5□□□□□ -0.73
HLA-DQB1-208ENST00000484729 ICOSQ9Y6W8 199 aa10.5□□□□□ -0.73
HLA-DQB1-208ENST00000484729 VPS13BQ7Z7G8 4022 aa10.5□□□□□ -0.73
HLA-DQB1-208ENST00000484729 SIVA1O15304 175 aa10.49□□□□□ -0.73
HLA-DQB1-208ENST00000484729 ATP6V0CP27449 155 aa10.49□□□□□ -0.73
HLA-DQB1-208ENST00000484729 KRTAP10-1P60331 282 aa10.49□□□□□ -0.73
HLA-DQB1-208ENST00000484729 ZNF415Q09FC8 603 aa10.49□□□□□ -0.73
HLA-DQB1-208ENST00000484729 ACOT6Q3I5F7 207 aaPredicted RBP10.49□□□□□ -0.73
HLA-DQB1-208ENST00000484729 FXYD5Q96DB9 178 aa10.49□□□□□ -0.73
HLA-DQB1-208ENST00000484729 PHYHIPLQ96FC7 376 aa10.49□□□□□ -0.73
HLA-DQB1-208ENST00000484729 BCL2L11O43521 198 aa10.48□□□□□ -0.73
HLA-DQB1-208ENST00000484729 OR7C2O60412 319 aa10.48□□□□□ -0.73
HLA-DQB1-208ENST00000484729 NXPH4O95158 308 aa10.48□□□□□ -0.73
HLA-DQB1-208ENST00000484729 ZNF138P52744 262 aa10.48□□□□□ -0.73
HLA-DQB1-208ENST00000484729 ZFP69Q49AA0 526 aa10.48□□□□□ -0.73
HLA-DQB1-208ENST00000484729 PSMG3Q9BT73 122 aaPredicted RBP10.48□□□□□ -0.73
HLA-DQB1-208ENST00000484729 SH3BGRL3Q9H299 93 aa10.48□□□□□ -0.73
HLA-DQB1-208ENST00000484729 PRO0255Q9UI72 69 aa10.48□□□□□ -0.73
HLA-DQB1-208ENST00000484729 CSN1S1P47710 185 aa10.47□□□□□ -0.73
HLA-DQB1-208ENST00000484729 RAB2AP61019 212 aa10.47□□□□□ -0.73
HLA-DQB1-208ENST00000484729 MUC21Q5SSG8 566 aa10.47□□□□□ -0.73
HLA-DQB1-208ENST00000484729 TMUB2Q71RG4 321 aa10.47□□□□□ -0.73
HLA-DQB1-208ENST00000484729 HYLS1Q96M11 299 aa10.47□□□□□ -0.73
HLA-DQB1-208ENST00000484729 C8orf49Q96NF6 230 aa10.47□□□□□ -0.73
HLA-DQB1-208ENST00000484729 ZNF471Q9BX82 626 aaPredicted RBP10.47□□□□□ -0.73
HLA-DQB1-208ENST00000484729 J3QL48 77 aa10.46□□□□□ -0.73
HLA-DQB1-208ENST00000484729 RANP62826 216 aaKnown RBP10.46□□□□□ -0.73
HLA-DQB1-208ENST00000484729 UBE2L3P68036 154 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms