RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 ARHGAP31Q2M1Z3 1444 aa-0.39□□□□□ -2.47
CCDC66-219ENST00000484441 TNS3Q68CZ2 1445 aa-0.39□□□□□ -2.47
CCDC66-219ENST00000484441 ANK1P16157 1881 aa-0.39□□□□□ -2.47
CCDC66-219ENST00000484441 WIZO95785 1651 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 MYOM1P52179 1685 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 USP54Q70EL1 1684 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 LMO7Q8WWI1 1683 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 ROBO1Q9Y6N7 1651 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 GLI2P10070 1586 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 DNMBPQ6XZF7 1577 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 PEG3Q9GZU2 1588 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 GRIN2AQ12879 1464 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 BTAF1O14981 1849 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 SBF2Q86WG5 1849 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 TOGARAM1Q9Y4F4 1720 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 TRAV3A0A0B4J244 114 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 LINC01546A6NGU7 62 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 TMEM114B3SHH9 223 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 F8WEM9 126 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 KLF7O75840 302 aaPredicted RBP-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 IFNA21P01568 189 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 IFNA17P01571 189 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 HLA-DRB1P01911 266 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 NEFHP12036 1026 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 CRYGSP22914 178 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 RPS20P60866 119 aaKnown RBP-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 UBA52P62987 128 aaKnown RBP-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 FAM74A1Q5RGS3 127 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 GLIPR1L1Q6UWM5 242 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 ATP11AUNQ6ZP68 121 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 ZNF833PQ6ZTB9 187 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 UBE2DNLQ8IWF7 75 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 FAM9CQ8IZT9 166 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 DEFB124Q8NES8 71 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 OR52R1Q8NGF1 315 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 LEAP2Q969E1 77 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 RMND5BQ96G75 393 aaPredicted RBP-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 ATP6V1G3Q96LB4 118 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 LINC00472Q9H8W2 130 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 FGFR1OP2Q9NVK5 253 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 EPDR1Q9UM22 224 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 UBE2D4Q9Y2X8 147 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 PIK3C2BO00750 1634 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 BIVM-ERCC5R4GMW8 1640 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 EFCAB6Q5THR3 1501 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 KDM5DQ9BY66 1539 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 SPTBP11277 2137 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 KDM3BQ7LBC6 1761 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 CCDC144AA2RUR9 1427 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 SOGA1O94964 1423 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 VPS8Q8N3P4 1428 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 FRMPD1Q5SYB0 1578 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 DIP2CQ9Y2E4 1556 aa-0.4□□□□□ -2.47
CCDC66-219ENST00000484441 NEO1Q92859 1461 aa-0.41□□□□□ -2.47
CCDC66-219ENST00000484441 MAGI1Q96QZ7 1491 aaPredicted RBP-0.41□□□□□ -2.47
CCDC66-219ENST00000484441 MLH3Q9UHC1 1453 aa-0.41□□□□□ -2.47
CCDC66-219ENST00000484441 A0A0G2JMZ2 1700 aa-0.41□□□□□ -2.47
CCDC66-219ENST00000484441 SPHKAPQ2M3C7 1700 aa-0.41□□□□□ -2.47
CCDC66-219ENST00000484441 IFT172Q9UG01 1749 aa-0.41□□□□□ -2.47
CCDC66-219ENST00000484441 CPDO75976 1380 aa-0.41□□□□□ -2.47
CCDC66-219ENST00000484441 SCRIBQ14160 1630 aa-0.41□□□□□ -2.47
CCDC66-219ENST00000484441 CAMSAP1Q5T5Y3 1602 aa-0.41□□□□□ -2.47
CCDC66-219ENST00000484441 NUP210Q8TEM1 1887 aaPredicted RBP-0.41□□□□□ -2.47
CCDC66-219ENST00000484441 MADDQ8WXG6 1647 aa-0.41□□□□□ -2.47
CCDC66-219ENST00000484441 RGPD2P0DJD1 1756 aa-0.41□□□□□ -2.47
CCDC66-219ENST00000484441 ANKRD36CQ5JPF3 1778 aa-0.41□□□□□ -2.47
CCDC66-219ENST00000484441 MAP3K1Q13233 1512 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 CLPSL1A2RUU4 121 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 H0YGG7 62 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 M0QZ58 72 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 CCL22O00626 93 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 NUPR1O60356 82 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 PITX3O75364 302 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 OR7C1O76099 320 aaPredicted RBP-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 IGF2P01344 180 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 IFNA4P05014 189 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 IFNA16P05015 189 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 TNP1P09430 55 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 PIRTP0C851 137 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 HLA-EP13747 358 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 HMGA1P17096 107 aaKnown RBP-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 KDELR1P24390 212 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 CD52P31358 61 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 SPRR1AP35321 89 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 SRP14P37108 136 aaKnown RBP-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 CDKN2CP42773 168 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 SERPINB9P50453 376 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 UBE2D3P61077 147 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 YPEL3P61236 119 aaPredicted RBP-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 TFF3Q07654 80 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 EIF3IQ13347 325 aaKnown RBP-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 WFDC2Q14508 124 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 H1FX-AS1Q4G0G2 97 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 LPCAT3Q6P1A2 487 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 LYG2Q86SG7 212 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 Q8IZM0 81 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 OR4S1Q8NGB4 309 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 TEX47Q8TBZ9 253 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 PSMF1Q92530 271 aa-0.41□□□□□ -2.48
CCDC66-219ENST00000484441 DIRC1Q969H9 104 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms