RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 TRBV7-9A0A0J9YWB2 115 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 A0A1W2PPM0 123 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 FABP5P3A8MUU1 101 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 ATP6V0E1O15342 81 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 NBR2O15453 112 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 GNG7O60262 68 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 CDK2AP2O75956 126 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 DPM2O94777 84 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 CNIH1O95406 144 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 IGKV1-17P01599 117 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 IGHV3-7P01780 117 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 TFF1P04155 84 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 IGLC6P0CF74 106 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 FGF6P10767 208 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 MRGPRG-AS1Q2M3A8 158 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 MINOS1Q5TGZ0 78 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 SAMD13Q5VXD3 122 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 ZNF562Q6V9R5 426 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 ADAMTSL5Q6ZMM2 481 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 AMN1Q8IY45 258 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 TTC9CQ8N5M4 171 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 ZNF491Q8N8L2 437 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 Q8N8P6 123 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 OR11H6Q8NGC7 330 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 RNASE6Q93091 150 aaKnown RBP3.66□□□□□ -1.82
SSBP1-211ENST00000484178 MRAP2Q96G30 205 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 ZC2HC1AQ96GY0 325 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 TIMD4Q96H15 378 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 SPANXA1Q9NS26 97 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 DPM3Q9P2X0 92 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 FAM215AQ9Y5M1 114 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 MINOS1-NBL1R4GNA1 71 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 SDK2Q58EX2 2172 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 BRWD1Q9NSI6 2320 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 DOCK11Q5JSL3 2073 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 GTF3C1Q12789 2109 aa3.65□□□□□ -1.82
SSBP1-211ENST00000484178 MED12LQ86YW9 2145 aa3.65□□□□□ -1.82
SSBP1-211ENST00000484178 PTPRBP23467 1997 aa3.65□□□□□ -1.82
SSBP1-211ENST00000484178 IGLV9-49A0A0B4J1Y8 123 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 PPIAL4CA0A0B4J2A2 164 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 NCBP2LA6PVI3 153 aaKnown RBP3.65□□□□□ -1.83
SSBP1-211ENST00000484178 D6R8Y8 96 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 LY6LH3BQJ8 138 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 K7EIM0 57 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 MRPS12O15235 138 aaKnown RBP3.65□□□□□ -1.83
SSBP1-211ENST00000484178 SH2D1AO60880 128 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 IGKCP01834 107 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 ARMS2P0C7Q2 107 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 PPIAL4GP0DN37 164 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 CCL3L1P16619 93 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 KRTAP5-9P26371 169 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 TCTAP57738 103 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 CCL8P80075 99 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 PAX8Q06710 450 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 KLF17Q5JT82 389 aaPredicted RBP3.65□□□□□ -1.83
SSBP1-211ENST00000484178 HCP5Q6MZN7 132 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 LYZL1Q6UWQ5 148 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 LINC00322Q6ZN03 302 aaPredicted RBP3.65□□□□□ -1.83
SSBP1-211ENST00000484178 LY6G5BQ8NDX9 201 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 ATP6V0E2Q8NHE4 81 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 ZNF502Q8TBZ5 544 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 MYOZ3Q8TDC0 251 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 ONECUT1Q9UBC0 465 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 RPH3ALQ9UNE2 315 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 SPCS1Q9Y6A9 102 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 PI4KAP42356 2102 aa3.65□□□□□ -1.83
SSBP1-211ENST00000484178 LAMA2P24043 3122 aaKnown RBP3.65□□□□□ -1.83
SSBP1-211ENST00000484178 IGLV11-55A0A075B6I3 123 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 IGLV5-45A0A087WSX0 123 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 A0A087WZ39 114 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 TRAV8-6A0A0B4J262 113 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 A0A1B0GV72 72 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 E7EUB6 86 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 M0R381 172 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 FCN3O75636 299 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 IL4P05112 153 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 PRSS2P07478 247 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 COL8A2P25067 703 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 IFI27P40305 119 aaPredicted RBP3.64□□□□□ -1.83
SSBP1-211ENST00000484178 RPL32P62910 135 aaKnown RBP3.64□□□□□ -1.83
SSBP1-211ENST00000484178 EBI3Q14213 229 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 DEFB109BQ30KR1 87 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 MRPL51Q4U2R6 128 aaKnown RBP3.64□□□□□ -1.83
SSBP1-211ENST00000484178 ORMDL2Q53FV1 153 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 C10orf55Q5SWW7 151 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 FAM201AQ5SY85 155 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 FOXI2Q6ZQN5 318 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 OR8A1Q8NGG7 326 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 CCL17Q92583 94 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 SIGMAR1Q99720 223 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 VGLL1Q99990 258 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 C20orf78Q9BR46 151 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 C21orf62Q9NYP8 219 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 MRPL36Q9P0J6 103 aaKnown RBP3.64□□□□□ -1.83
SSBP1-211ENST00000484178 ZNF407Q9C0G0 2248 aa3.64□□□□□ -1.83
SSBP1-211ENST00000484178 C5orf42Q9H799 3197 aa3.63□□□□□ -1.83
SSBP1-211ENST00000484178 A0A087WX48 190 aa3.63□□□□□ -1.83
SSBP1-211ENST00000484178 A0A1B0GWB2 263 aa3.63□□□□□ -1.83
SSBP1-211ENST00000484178 E9PLD3 99 aa3.63□□□□□ -1.83
SSBP1-211ENST00000484178 H3BUT2 72 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms