RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 KTN1Q86UP2 1357 aaKnown RBP2.36□□□□□ -2.03
PTCD3-214ENST00000483925 ADGRB1O14514 1584 aa2.36□□□□□ -2.03
PTCD3-214ENST00000483925 FANCMQ8IYD8 2048 aa2.36□□□□□ -2.03
PTCD3-214ENST00000483925 TMEM218A2RU14 115 aa2.36□□□□□ -2.03
PTCD3-214ENST00000483925 IFNA17P01571 189 aa2.36□□□□□ -2.03
PTCD3-214ENST00000483925 RNASE2P10153 161 aaKnown RBP2.36□□□□□ -2.03
PTCD3-214ENST00000483925 Q56UQ5 140 aa2.36□□□□□ -2.03
PTCD3-214ENST00000483925 C3orf62Q6ZUJ4 267 aa2.36□□□□□ -2.03
PTCD3-214ENST00000483925 LYPD1Q8N2G4 141 aa2.36□□□□□ -2.03
PTCD3-214ENST00000483925 VSTM2AQ8TAG5 236 aa2.36□□□□□ -2.03
PTCD3-214ENST00000483925 AGPAT4-IT1Q9H0P7 198 aa2.36□□□□□ -2.03
PTCD3-214ENST00000483925 TAS2R8Q9NYW2 309 aa2.36□□□□□ -2.03
PTCD3-214ENST00000483925 CHCHD2Q9Y6H1 151 aaPredicted RBP2.36□□□□□ -2.03
PTCD3-214ENST00000483925 CPAMD8Q8IZJ3 1885 aa2.36□□□□□ -2.03
PTCD3-214ENST00000483925 SEC16AO15027 2179 aa2.36□□□□□ -2.03
PTCD3-214ENST00000483925 SCN8AQ9UQD0 1980 aa2.36□□□□□ -2.03
PTCD3-214ENST00000483925 TRPM6Q9BX84 2022 aa2.35□□□□□ -2.03
PTCD3-214ENST00000483925 TRAV14DV4A0A0A6YYC5 116 aa2.35□□□□□ -2.03
PTCD3-214ENST00000483925 H3BRN7 92 aa2.35□□□□□ -2.03
PTCD3-214ENST00000483925 TPRXLQ17RH7 258 aa2.35□□□□□ -2.03
PTCD3-214ENST00000483925 Q1T7F1 81 aa2.35□□□□□ -2.03
PTCD3-214ENST00000483925 C1orf137Q5JT78 98 aa2.35□□□□□ -2.03
PTCD3-214ENST00000483925 MIC13Q5XKP0 118 aa2.35□□□□□ -2.03
PTCD3-214ENST00000483925 PLPP5Q8NEB5 264 aa2.35□□□□□ -2.03
PTCD3-214ENST00000483925 SEC11CQ9BY50 192 aa2.35□□□□□ -2.03
PTCD3-214ENST00000483925 RPRMQ9NS64 109 aa2.35□□□□□ -2.03
PTCD3-214ENST00000483925 SERP1Q9Y6X1 66 aa2.35□□□□□ -2.03
PTCD3-214ENST00000483925 STRCQ7RTU9 1775 aa2.35□□□□□ -2.03
PTCD3-214ENST00000483925 FOCADQ5VW36 1801 aa2.35□□□□□ -2.03
PTCD3-214ENST00000483925 WDR97A6NE52 1622 aa2.35□□□□□ -2.03
PTCD3-214ENST00000483925 MYO5AQ9Y4I1 1855 aaKnown RBP2.35□□□□□ -2.03
PTCD3-214ENST00000483925 DISP1Q96F81 1524 aa2.34□□□□□ -2.03
PTCD3-214ENST00000483925 TRAV30A0A087WSZ9 112 aa2.34□□□□□ -2.03
PTCD3-214ENST00000483925 TRAV2A0A0B4J234 112 aa2.34□□□□□ -2.03
PTCD3-214ENST00000483925 TRGV4A0A0C4DH28 118 aa2.34□□□□□ -2.03
PTCD3-214ENST00000483925 SDHAF1A6NFY7 115 aa2.34□□□□□ -2.03
PTCD3-214ENST00000483925 APOC4-APOC2K7ER74 178 aa2.34□□□□□ -2.03
PTCD3-214ENST00000483925 PITX3O75364 302 aa2.34□□□□□ -2.03
PTCD3-214ENST00000483925 APOC2P02655 101 aa2.34□□□□□ -2.03
PTCD3-214ENST00000483925 ADCYAP1P18509 176 aa2.34□□□□□ -2.03
PTCD3-214ENST00000483925 OR2T2Q6IF00 324 aa2.34□□□□□ -2.03
PTCD3-214ENST00000483925 FOXI2Q6ZQN5 318 aa2.34□□□□□ -2.03
PTCD3-214ENST00000483925 GKN2Q86XP6 184 aa2.34□□□□□ -2.03
PTCD3-214ENST00000483925 OR10AG1Q8NH19 301 aa2.34□□□□□ -2.03
PTCD3-214ENST00000483925 POLEQ07864 2286 aa2.34□□□□□ -2.04
PTCD3-214ENST00000483925 COL4A4P53420 1690 aaPredicted RBP2.34□□□□□ -2.04
PTCD3-214ENST00000483925 PZPP20742 1482 aa2.33□□□□□ -2.04
PTCD3-214ENST00000483925 M0R143 59 aa2.33□□□□□ -2.04
PTCD3-214ENST00000483925 MIR22HGQ0VDD5 57 aa2.33□□□□□ -2.04
PTCD3-214ENST00000483925 Q6AWC8 147 aa2.33□□□□□ -2.04
PTCD3-214ENST00000483925 MRPL54Q6P161 138 aaKnown RBP2.33□□□□□ -2.04
PTCD3-214ENST00000483925 SLC25A26Q70HW3 274 aa2.33□□□□□ -2.04
PTCD3-214ENST00000483925 LINC00304Q8N9R0 145 aa2.33□□□□□ -2.04
PTCD3-214ENST00000483925 Q8TAT8 98 aa2.33□□□□□ -2.04
PTCD3-214ENST00000483925 DYNLRB2Q8TF09 96 aa2.33□□□□□ -2.04
PTCD3-214ENST00000483925 SPTSSAQ969W0 71 aa2.33□□□□□ -2.04
PTCD3-214ENST00000483925 CCDC88CQ9P219 2028 aa2.33□□□□□ -2.04
PTCD3-214ENST00000483925 MAPKBP1O60336 1514 aa2.32□□□□□ -2.04
PTCD3-214ENST00000483925 USP54Q70EL1 1684 aa2.32□□□□□ -2.04
PTCD3-214ENST00000483925 MCRIP1C9JLW8 97 aa2.32□□□□□ -2.04
PTCD3-214ENST00000483925 GEMIN2O14893 280 aaKnown RBP2.32□□□□□ -2.04
PTCD3-214ENST00000483925 KLF7O75840 302 aaPredicted RBP2.32□□□□□ -2.04
PTCD3-214ENST00000483925 P0C880 135 aa2.32□□□□□ -2.04
PTCD3-214ENST00000483925 HSD52Q0P140 79 aa2.32□□□□□ -2.04
PTCD3-214ENST00000483925 HCP5Q6MZN7 132 aa2.32□□□□□ -2.04
PTCD3-214ENST00000483925 KRTAP26-1Q6PEX3 210 aa2.32□□□□□ -2.04
PTCD3-214ENST00000483925 ZCCHC23Q6ZST2 131 aa2.32□□□□□ -2.04
PTCD3-214ENST00000483925 SPACA4Q8TDM5 124 aa2.32□□□□□ -2.04
PTCD3-214ENST00000483925 MRPL57Q9BQC6 102 aaKnown RBP2.32□□□□□ -2.04
PTCD3-214ENST00000483925 HEATR5AQ86XA9 2040 aa2.32□□□□□ -2.04
PTCD3-214ENST00000483925 PXDNLA1KZ92 1463 aa2.32□□□□□ -2.04
PTCD3-214ENST00000483925 CCL25O15444 150 aa2.31□□□□□ -2.04
PTCD3-214ENST00000483925 IL5P05113 134 aa2.31□□□□□ -2.04
PTCD3-214ENST00000483925 PIPP12273 146 aaPredicted RBP2.31□□□□□ -2.04
PTCD3-214ENST00000483925 COX7CP15954 63 aa2.31□□□□□ -2.04
PTCD3-214ENST00000483925 PKIAP61925 76 aa2.31□□□□□ -2.04
PTCD3-214ENST00000483925 CATR1Q13166 79 aa2.31□□□□□ -2.04
PTCD3-214ENST00000483925 C12orf73Q69YU5 71 aa2.31□□□□□ -2.04
PTCD3-214ENST00000483925 SVBPQ8N300 66 aa2.31□□□□□ -2.04
PTCD3-214ENST00000483925 TXNDC17Q9BRA2 123 aa2.31□□□□□ -2.04
PTCD3-214ENST00000483925 TTTY12Q9BZ98 90 aa2.31□□□□□ -2.04
PTCD3-214ENST00000483925 ANAPC1Q9H1A4 1944 aa2.3□□□□□ -2.04
PTCD3-214ENST00000483925 CUL9Q8IWT3 2517 aa2.3□□□□□ -2.04
PTCD3-214ENST00000483925 PIGBOS1A0A0B4J2F0 54 aa2.3□□□□□ -2.04
PTCD3-214ENST00000483925 NDUFB6O95139 128 aa2.3□□□□□ -2.04
PTCD3-214ENST00000483925 IGKV1-17P01599 117 aa2.3□□□□□ -2.04
PTCD3-214ENST00000483925 GNG2P59768 71 aa2.3□□□□□ -2.04
PTCD3-214ENST00000483925 CNBPP62633 177 aaKnown RBP2.3□□□□□ -2.04
PTCD3-214ENST00000483925 C9orf153Q5TBE3 101 aa2.3□□□□□ -2.04
PTCD3-214ENST00000483925 SPANXN1Q5VSR9 72 aa2.3□□□□□ -2.04
PTCD3-214ENST00000483925 C5orf17Q8NAS9 161 aa2.3□□□□□ -2.04
PTCD3-214ENST00000483925 TMEM242Q9NWH2 141 aa2.3□□□□□ -2.04
PTCD3-214ENST00000483925 ORMDL1Q9P0S3 153 aa2.3□□□□□ -2.04
PTCD3-214ENST00000483925 ZNF609O15014 1411 aa2.3□□□□□ -2.04
PTCD3-214ENST00000483925 PTPRBP23467 1997 aa2.29□□□□□ -2.04
PTCD3-214ENST00000483925 MYLKQ15746 1914 aa2.29□□□□□ -2.04
PTCD3-214ENST00000483925 CUL7Q14999 1698 aa2.29□□□□□ -2.04
PTCD3-214ENST00000483925 ZFYVE16Q7Z3T8 1539 aa2.29□□□□□ -2.04
PTCD3-214ENST00000483925 COL1A2P08123 1366 aa2.29□□□□□ -2.04
PTCD3-214ENST00000483925 IGKV1D-17A0A075B6S4 117 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms