RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 UBE2L3P68036 154 aaKnown RBP13.74□□□□□ -0.21
HPS4-213ENST00000483631 ZNF266Q14584 549 aa13.74□□□□□ -0.21
HPS4-213ENST00000483631 ESRGQ1W209 222 aa13.74□□□□□ -0.21
HPS4-213ENST00000483631 PRR9Q5T870 116 aa13.74□□□□□ -0.21
HPS4-213ENST00000483631 TMED6Q8WW62 240 aa13.74□□□□□ -0.21
HPS4-213ENST00000483631 VSIG2Q96IQ7 327 aa13.74□□□□□ -0.21
HPS4-213ENST00000483631 ST6GAL2Q96JF0 529 aa13.74□□□□□ -0.21
HPS4-213ENST00000483631 ARPC5LQ9BPX5 153 aa13.74□□□□□ -0.21
HPS4-213ENST00000483631 KLF12Q9Y4X4 402 aa13.74□□□□□ -0.21
HPS4-213ENST00000483631 TNP2Q05952 138 aa13.73□□□□□ -0.21
HPS4-213ENST00000483631 SLAQ13239 276 aa13.73□□□□□ -0.21
HPS4-213ENST00000483631 ARL6IP6Q8N6S5 226 aa13.73□□□□□ -0.21
HPS4-213ENST00000483631 MBD2Q9UBB5 411 aa13.73□□□□□ -0.21
HPS4-213ENST00000483631 A0A096LPF7 62 aa13.72□□□□□ -0.21
HPS4-213ENST00000483631 ZNF415Q09FC8 603 aa13.72□□□□□ -0.21
HPS4-213ENST00000483631 DIRC3C9JPN6 131 aa13.71□□□□□ -0.21
HPS4-213ENST00000483631 Q6AWC8 147 aa13.71□□□□□ -0.21
HPS4-213ENST00000483631 PQLC2Q6ZP29 291 aa13.71□□□□□ -0.21
HPS4-213ENST00000483631 ZNF575Q86XF7 245 aa13.71□□□□□ -0.21
HPS4-213ENST00000483631 Q8TAT8 98 aa13.71□□□□□ -0.21
HPS4-213ENST00000483631 OTORQ9NRC9 128 aa13.71□□□□□ -0.21
HPS4-213ENST00000483631 ACOT6Q3I5F7 207 aaPredicted RBP13.7□□□□□ -0.22
HPS4-213ENST00000483631 FAM74A1Q5RGS3 127 aa13.7□□□□□ -0.22
HPS4-213ENST00000483631 SMIM3Q9BZL3 60 aa13.7□□□□□ -0.22
HPS4-213ENST00000483631 BATF3Q9NR55 127 aa13.7□□□□□ -0.22
HPS4-213ENST00000483631 PRO0255Q9UI72 69 aa13.7□□□□□ -0.22
HPS4-213ENST00000483631 TP53TG3Q9ULZ0 132 aa13.7□□□□□ -0.22
HPS4-213ENST00000483631 ICOSQ9Y6W8 199 aa13.69□□□□□ -0.22
HPS4-213ENST00000483631 PAX4O43316 350 aa13.68□□□□□ -0.22
HPS4-213ENST00000483631 Q6ZQT7 251 aa13.68□□□□□ -0.22
HPS4-213ENST00000483631 SPXQ9BT56 116 aa13.68□□□□□ -0.22
HPS4-213ENST00000483631 KRTAP1-5Q9BYS1 174 aa13.68□□□□□ -0.22
HPS4-213ENST00000483631 A0A1W2PPV4 95 aa13.67□□□□□ -0.22
HPS4-213ENST00000483631 TDRG1Q3Y452 100 aa13.67□□□□□ -0.22
HPS4-213ENST00000483631 CMTM2Q8TAZ6 248 aa13.67□□□□□ -0.22
HPS4-213ENST00000483631 WFDC1Q9HC57 220 aa13.67□□□□□ -0.22
HPS4-213ENST00000483631 MRPL16Q9NX20 251 aaKnown RBP13.67□□□□□ -0.22
HPS4-213ENST00000483631 TRGV11A0A075B6L2 103 aa13.66□□□□□ -0.22
HPS4-213ENST00000483631 C16orf90A8MZG2 172 aa13.66□□□□□ -0.22
HPS4-213ENST00000483631 FAM159AQ6UWV7 190 aa13.66□□□□□ -0.22
HPS4-213ENST00000483631 IQCF2Q8IXL9 164 aa13.66□□□□□ -0.22
HPS4-213ENST00000483631 RASL10AQ92737 203 aa13.66□□□□□ -0.22
HPS4-213ENST00000483631 PGPA6NDG6 321 aa13.65□□□□□ -0.22
HPS4-213ENST00000483631 CRYBA4P53673 196 aa13.65□□□□□ -0.22
HPS4-213ENST00000483631 MRPL23Q16540 153 aaKnown RBP13.65□□□□□ -0.22
HPS4-213ENST00000483631 OR2G3Q8NGZ4 309 aa13.65□□□□□ -0.22
HPS4-213ENST00000483631 HHLA3Q9XRX5 114 aa13.65□□□□□ -0.22
HPS4-213ENST00000483631 SIVA1O15304 175 aa13.64□□□□□ -0.23
HPS4-213ENST00000483631 CDK2AP2O75956 126 aa13.64□□□□□ -0.23
HPS4-213ENST00000483631 FHL2Q14192 279 aa13.64□□□□□ -0.23
HPS4-213ENST00000483631 MUC21Q5SSG8 566 aa13.64□□□□□ -0.23
HPS4-213ENST00000483631 OR10G4Q8NGN3 311 aa13.64□□□□□ -0.23
HPS4-213ENST00000483631 MDFICQ9P1T7 246 aa13.64□□□□□ -0.23
HPS4-213ENST00000483631 SERTM2A0A1B0GWG4 89 aa13.63□□□□□ -0.23
HPS4-213ENST00000483631 PTTG1O95997 202 aa13.63□□□□□ -0.23
HPS4-213ENST00000483631 IGHV3-53P01767 116 aa13.63□□□□□ -0.23
HPS4-213ENST00000483631 RAB2AP61019 212 aa13.63□□□□□ -0.23
HPS4-213ENST00000483631 OR10G9Q8NGN4 311 aa13.63□□□□□ -0.23
HPS4-213ENST00000483631 OR10G7Q8NGN6 311 aa13.63□□□□□ -0.23
HPS4-213ENST00000483631 HYLS1Q96M11 299 aa13.63□□□□□ -0.23
HPS4-213ENST00000483631 PSMG3Q9BT73 122 aaPredicted RBP13.63□□□□□ -0.23
HPS4-213ENST00000483631 ALG5Q9Y673 324 aa13.63□□□□□ -0.23
HPS4-213ENST00000483631 TRAV21A0A0B4J279 112 aa13.62□□□□□ -0.23
HPS4-213ENST00000483631 TMEM183BQ1AE95 376 aa13.62□□□□□ -0.23
HPS4-213ENST00000483631 TMEM183AQ8IXX5 376 aa13.62□□□□□ -0.23
HPS4-213ENST00000483631 ASB13Q8WXK3 278 aa13.62□□□□□ -0.23
HPS4-213ENST00000483631 AQP10Q96PS8 301 aa13.62□□□□□ -0.23
HPS4-213ENST00000483631 TRGV4A0A0C4DH28 118 aa13.61□□□□□ -0.23
HPS4-213ENST00000483631 GOLT1AQ6ZVE7 132 aa13.61□□□□□ -0.23
HPS4-213ENST00000483631 NEGR1Q7Z3B1 354 aa13.61□□□□□ -0.23
HPS4-213ENST00000483631 C8orf49Q96NF6 230 aa13.61□□□□□ -0.23
HPS4-213ENST00000483631 LRP1BQ9NZR2 4599 aa13.61□□□□□ -0.23
HPS4-213ENST00000483631 K7EP13 123 aa13.6□□□□□ -0.23
HPS4-213ENST00000483631 NXPH4O95158 308 aa13.6□□□□□ -0.23
HPS4-213ENST00000483631 MBP02144 154 aa13.6□□□□□ -0.23
HPS4-213ENST00000483631 ORM1P02763 201 aa13.6□□□□□ -0.23
HPS4-213ENST00000483631 STAG3L2P0CL84 134 aa13.6□□□□□ -0.23
HPS4-213ENST00000483631 STAG3L3P0CL85 134 aa13.6□□□□□ -0.23
HPS4-213ENST00000483631 CDC34P49427 236 aaPredicted RBP13.6□□□□□ -0.23
HPS4-213ENST00000483631 SERF2P84101 59 aa13.6□□□□□ -0.23
HPS4-213ENST00000483631 SUN5Q8TC36 379 aa13.6□□□□□ -0.23
HPS4-213ENST00000483631 KCNS1Q96KK3 526 aa13.6□□□□□ -0.23
HPS4-213ENST00000483631 TRAV4A0A0B4J268 109 aa13.59□□□□□ -0.23
HPS4-213ENST00000483631 M0R2P5 195 aa13.59□□□□□ -0.23
HPS4-213ENST00000483631 ARL14EPLP0DKL9 152 aa13.59□□□□□ -0.23
HPS4-213ENST00000483631 LINC00315P59091 139 aa13.59□□□□□ -0.23
HPS4-213ENST00000483631 LYPD5Q6UWN5 251 aa13.59□□□□□ -0.23
HPS4-213ENST00000483631 MED28Q9H204 178 aa13.59□□□□□ -0.23
HPS4-213ENST00000483631 TREM1Q9NP99 234 aa13.59□□□□□ -0.23
HPS4-213ENST00000483631 RPH3ALQ9UNE2 315 aa13.59□□□□□ -0.23
HPS4-213ENST00000483631 ABCA13Q86UQ4 5058 aa13.58□□□□□ -0.24
HPS4-213ENST00000483631 EIF3GO75821 320 aaKnown RBP eCLIP13.58□□□□□ -0.24
HPS4-213ENST00000483631 SPATA12Q7Z6I5 190 aa13.58□□□□□ -0.24
HPS4-213ENST00000483631 C5orf17Q8NAS9 161 aa13.58□□□□□ -0.24
HPS4-213ENST00000483631 ZNF479Q96JC4 524 aa13.58□□□□□ -0.24
HPS4-213ENST00000483631 NDFIP1Q9BT67 221 aa13.58□□□□□ -0.24
HPS4-213ENST00000483631 IGHV3-16A0A0C4DH30 117 aa13.57□□□□□ -0.24
HPS4-213ENST00000483631 K7EQD1 137 aa13.57□□□□□ -0.24
HPS4-213ENST00000483631 SRIP30626 198 aa13.57□□□□□ -0.24
HPS4-213ENST00000483631 Q6ZRN7 208 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms