RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 TCRAP04437 139 aa12.73□□□□□ -0.37
HDAC6-225ENST00000483506 GNG5P63218 68 aa12.73□□□□□ -0.37
HDAC6-225ENST00000483506 DAZ2Q13117 558 aaKnown RBP12.73□□□□□ -0.37
HDAC6-225ENST00000483506 TMUB2Q71RG4 321 aa12.73□□□□□ -0.37
HDAC6-225ENST00000483506 NDUFAF3Q9BU61 184 aa12.73□□□□□ -0.37
HDAC6-225ENST00000483506 CBY3A6NI87 242 aa12.72□□□□□ -0.37
HDAC6-225ENST00000483506 UMAD1C9J7I0 102 aa12.72□□□□□ -0.37
HDAC6-225ENST00000483506 DEFB130BP0DP73 79 aa12.72□□□□□ -0.37
HDAC6-225ENST00000483506 DEFB130AP0DP74 79 aa12.72□□□□□ -0.37
HDAC6-225ENST00000483506 EIF5AP63241 154 aaKnown RBP12.72□□□□□ -0.37
HDAC6-225ENST00000483506 STOML3Q8TAV4 291 aa12.72□□□□□ -0.37
HDAC6-225ENST00000483506 ZNF471Q9BX82 626 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-225ENST00000483506 RPH3ALQ9UNE2 315 aa12.72□□□□□ -0.37
HDAC6-225ENST00000483506 IGHV1OR15-1A0A075B7D0 117 aa12.71□□□□□ -0.37
HDAC6-225ENST00000483506 TRAV8-1A0A0A6YYK1 113 aa12.71□□□□□ -0.37
HDAC6-225ENST00000483506 MAP1LC3B2A6NCE7 125 aa12.71□□□□□ -0.37
HDAC6-225ENST00000483506 SNURFLB1AK76 121 aa12.71□□□□□ -0.37
HDAC6-225ENST00000483506 SUMO1P63165 101 aaKnown RBP12.71□□□□□ -0.37
HDAC6-225ENST00000483506 IBA57Q5T440 356 aaKnown RBP12.71□□□□□ -0.37
HDAC6-225ENST00000483506 Q6ZQT7 251 aa12.71□□□□□ -0.37
HDAC6-225ENST00000483506 TVP23CQ96ET8 276 aa12.71□□□□□ -0.37
HDAC6-225ENST00000483506 MAP1LC3BQ9GZQ8 125 aa12.71□□□□□ -0.37
HDAC6-225ENST00000483506 TMPRSS5Q9H3S3 457 aa12.71□□□□□ -0.37
HDAC6-225ENST00000483506 EPDR1Q9UM22 224 aa12.71□□□□□ -0.37
HDAC6-225ENST00000483506 RGS13O14921 159 aa12.7□□□□□ -0.38
HDAC6-225ENST00000483506 C1QBP02746 253 aa12.7□□□□□ -0.38
HDAC6-225ENST00000483506 ATP5G1P05496 136 aa12.7□□□□□ -0.38
HDAC6-225ENST00000483506 ATP5G3P48201 142 aa12.7□□□□□ -0.38
HDAC6-225ENST00000483506 FGF8P55075 233 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-225ENST00000483506 NKX6-2Q9C056 277 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-225ENST00000483506 FBLL1A6NHQ2 334 aaKnown RBP12.69□□□□□ -0.38
HDAC6-225ENST00000483506 FAM74A7A6NL05 159 aa12.69□□□□□ -0.38
HDAC6-225ENST00000483506 K7EQM0 130 aa12.69□□□□□ -0.38
HDAC6-225ENST00000483506 PFDN1O60925 122 aa12.69□□□□□ -0.38
HDAC6-225ENST00000483506 IGLV2-11P01706 119 aa12.69□□□□□ -0.38
HDAC6-225ENST00000483506 TPT1P13693 172 aaKnown RBP12.69□□□□□ -0.38
HDAC6-225ENST00000483506 HTN3P15516 51 aa12.69□□□□□ -0.38
HDAC6-225ENST00000483506 FHITP49789 147 aa12.69□□□□□ -0.38
HDAC6-225ENST00000483506 TCL1AP56279 114 aa12.69□□□□□ -0.38
HDAC6-225ENST00000483506 LGALSLQ3ZCW2 172 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-225ENST00000483506 DPPA3Q6W0C5 159 aa12.69□□□□□ -0.38
HDAC6-225ENST00000483506 IQCF2Q8IXL9 164 aa12.69□□□□□ -0.38
HDAC6-225ENST00000483506 CYB561D1Q8N8Q1 229 aa12.69□□□□□ -0.38
HDAC6-225ENST00000483506 TMEM75Q8N9X5 138 aa12.69□□□□□ -0.38
HDAC6-225ENST00000483506 C18orf15Q96N68 181 aa12.69□□□□□ -0.38
HDAC6-225ENST00000483506 ATG101Q9BSB4 218 aa12.69□□□□□ -0.38
HDAC6-225ENST00000483506 TDRG1Q3Y452 100 aa12.68□□□□□ -0.38
HDAC6-225ENST00000483506 MBD3L1Q8WWY6 194 aa12.68□□□□□ -0.38
HDAC6-225ENST00000483506 TREM1Q9NP99 234 aa12.68□□□□□ -0.38
HDAC6-225ENST00000483506 GSN-AS1Q9NRJ2 163 aa12.68□□□□□ -0.38
HDAC6-225ENST00000483506 TP53TG3Q9ULZ0 132 aa12.68□□□□□ -0.38
HDAC6-225ENST00000483506 ARL2-SNX15V9GYD0 113 aa12.68□□□□□ -0.38
HDAC6-225ENST00000483506 SPINK4O60575 86 aa12.67□□□□□ -0.38
HDAC6-225ENST00000483506 TMEM88Q6PEY1 159 aa12.67□□□□□ -0.38
HDAC6-225ENST00000483506 PSG8Q9UQ74 426 aa12.67□□□□□ -0.38
HDAC6-225ENST00000483506 TRAV21A0A0B4J279 112 aa12.66□□□□□ -0.38
HDAC6-225ENST00000483506 UBE2G2P60604 165 aa12.66□□□□□ -0.38
HDAC6-225ENST00000483506 FLI1Q01543 452 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-225ENST00000483506 Q6ZTI0 123 aa12.66□□□□□ -0.38
HDAC6-225ENST00000483506 AKAP14Q86UN6 197 aa12.66□□□□□ -0.38
HDAC6-225ENST00000483506 NDFIP1Q9BT67 221 aa12.66□□□□□ -0.38
HDAC6-225ENST00000483506 KLF12Q9Y4X4 402 aa12.66□□□□□ -0.38
HDAC6-225ENST00000483506 GAGE12BA1L429 117 aa12.65□□□□□ -0.38
HDAC6-225ENST00000483506 F6UZH7 168 aa12.65□□□□□ -0.38
HDAC6-225ENST00000483506 GAGE7O76087 117 aa12.65□□□□□ -0.38
HDAC6-225ENST00000483506 GAGE12FP0CL80 117 aa12.65□□□□□ -0.38
HDAC6-225ENST00000483506 GAGE12GP0CL81 117 aa12.65□□□□□ -0.38
HDAC6-225ENST00000483506 GAGE12IP0CL82 117 aa12.65□□□□□ -0.38
HDAC6-225ENST00000483506 P0DMU3 169 aa12.65□□□□□ -0.38
HDAC6-225ENST00000483506 FAM231AP0DMU4 169 aa12.65□□□□□ -0.38
HDAC6-225ENST00000483506 FAM231CP0DMU5 169 aa12.65□□□□□ -0.38
HDAC6-225ENST00000483506 LGALS9BQ3B8N2 356 aa12.65□□□□□ -0.38
HDAC6-225ENST00000483506 C15orf53Q8NAA6 179 aa12.65□□□□□ -0.38
HDAC6-225ENST00000483506 FAM213BQ8TBF2 198 aa12.65□□□□□ -0.38
HDAC6-225ENST00000483506 HIST1H2BAQ96A08 127 aa12.65□□□□□ -0.38
HDAC6-225ENST00000483506 SGK494Q96LW2 274 aa12.65□□□□□ -0.38
HDAC6-225ENST00000483506 TCEAL7Q9BRU2 100 aa12.65□□□□□ -0.38
HDAC6-225ENST00000483506 F5H768 121 aa12.64□□□□□ -0.39
HDAC6-225ENST00000483506 PEX7O00628 323 aa12.64□□□□□ -0.39
HDAC6-225ENST00000483506 ZNF415Q09FC8 603 aa12.64□□□□□ -0.39
HDAC6-225ENST00000483506 MUC21Q5SSG8 566 aa12.64□□□□□ -0.39
HDAC6-225ENST00000483506 FAM159AQ6UWV7 190 aa12.64□□□□□ -0.39
HDAC6-225ENST00000483506 SFT2D1Q8WV19 159 aa12.64□□□□□ -0.39
HDAC6-225ENST00000483506 TRGV11A0A075B6L2 103 aa12.63□□□□□ -0.39
HDAC6-225ENST00000483506 IFNA7P01567 189 aa12.63□□□□□ -0.39
HDAC6-225ENST00000483506 SAPCD1Q5SSQ6 148 aa12.63□□□□□ -0.39
HDAC6-225ENST00000483506 EIF5AL1Q6IS14 154 aaKnown RBP12.63□□□□□ -0.39
HDAC6-225ENST00000483506 MUC4Q99102 2169 aa12.62□□□□□ -0.39
HDAC6-225ENST00000483506 hCG_2014768A0A024R1R8 64 aa12.62□□□□□ -0.39
HDAC6-225ENST00000483506 TRGV1A0A0A0MS02 117 aa12.62□□□□□ -0.39
HDAC6-225ENST00000483506 PPT1P50897 306 aa12.62□□□□□ -0.39
HDAC6-225ENST00000483506 RAB5CP51148 216 aa12.62□□□□□ -0.39
HDAC6-225ENST00000483506 ZNF80P51504 273 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-225ENST00000483506 PRNTQ86SH4 94 aa12.62□□□□□ -0.39
HDAC6-225ENST00000483506 POM121L12Q8N7R1 296 aa12.62□□□□□ -0.39
HDAC6-225ENST00000483506 C8orf49Q96NF6 230 aa12.62□□□□□ -0.39
HDAC6-225ENST00000483506 MDFICQ9P1T7 246 aa12.62□□□□□ -0.39
HDAC6-225ENST00000483506 PFN1P07737 140 aaKnown RBP12.61□□□□□ -0.39
HDAC6-225ENST00000483506 H2AFB1P0C5Y9 115 aa12.61□□□□□ -0.39
HDAC6-225ENST00000483506 HOXA5P20719 270 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms