RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 MALP21145 153 aa6.11□□□□□ -1.43
COL4A5-205ENST00000483338 LINC00305Q7Z4B0 112 aa6.11□□□□□ -1.43
COL4A5-205ENST00000483338 C2orf48Q96LS8 159 aa6.11□□□□□ -1.43
COL4A5-205ENST00000483338 C1orf43Q9BWL3 253 aa6.11□□□□□ -1.43
COL4A5-205ENST00000483338 FOXA2Q9Y261 457 aaPredicted RBP6.11□□□□□ -1.43
COL4A5-205ENST00000483338 LAMA1P25391 3075 aa6.11□□□□□ -1.43
COL4A5-205ENST00000483338 PRR14LQ5THK1 2151 aa6.11□□□□□ -1.43
COL4A5-205ENST00000483338 hADV29S1A0JD25 119 aa6.11□□□□□ -1.43
COL4A5-205ENST00000483338 CXorf67Q86X51 503 aaPredicted RBP6.11□□□□□ -1.43
COL4A5-205ENST00000483338 DSCR8Q96T75 97 aa6.11□□□□□ -1.43
COL4A5-205ENST00000483338 FOXB1Q99853 325 aa6.11□□□□□ -1.43
COL4A5-205ENST00000483338 SPANXCQ9NY87 97 aa6.11□□□□□ -1.43
COL4A5-205ENST00000483338 CELSR3Q9NYQ7 3312 aa6.11□□□□□ -1.43
COL4A5-205ENST00000483338 NAV3Q8IVL0 2385 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 OOEPA6NGQ2 149 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 CCL3P10147 92 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 PLNP26678 52 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 SSR4P51571 173 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 EDDM3AQ14507 147 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 RPL39P5Q59GN2 51 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 FAM19A4Q96LR4 140 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 LINC01600Q96MT4 127 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 Q9H3A6 140 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 OCIAD1Q9NX40 245 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 IGLV3-32A0A0A0MS00 114 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 TMEM30CPA0ZSE6 113 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 LILRA5A6NI73 299 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 PRB4P10163 310 aaPredicted RBP6.1□□□□□ -1.43
COL4A5-205ENST00000483338 CRIP1P50238 77 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 DLX6P56179 175 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 LINC01559Q495D7 138 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 LINC01620Q4KN68 170 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 SCGB1D4Q6XE38 83 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 ZGRF1Q86YA3 2104 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 FAM240AA0A1B0GVK7 77 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 ZNF815PA8K554 130 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 CD69Q07108 199 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 IMUPQ9GZP8 106 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 PRO1854Q9UHT4 67 aa6.1□□□□□ -1.43
COL4A5-205ENST00000483338 RPUSD1Q9UJJ7 312 aaKnown RBP6.1□□□□□ -1.43
COL4A5-205ENST00000483338 J3QT63 122 aa6.09□□□□□ -1.43
COL4A5-205ENST00000483338 HLA-DMBP28068 263 aa6.09□□□□□ -1.43
COL4A5-205ENST00000483338 GOLT1AQ6ZVE7 132 aa6.09□□□□□ -1.43
COL4A5-205ENST00000483338 PKIGQ9Y2B9 76 aa6.09□□□□□ -1.43
COL4A5-205ENST00000483338 PYGO1Q9Y3Y4 419 aa6.09□□□□□ -1.43
COL4A5-205ENST00000483338 TRAV17A0A0B4J275 112 aa6.09□□□□□ -1.43
COL4A5-205ENST00000483338 RS1O15537 224 aa6.09□□□□□ -1.43
COL4A5-205ENST00000483338 CCL4P13236 92 aa6.09□□□□□ -1.43
COL4A5-205ENST00000483338 PCBD1P61457 104 aa6.09□□□□□ -1.43
COL4A5-205ENST00000483338 Q8N8P6 123 aa6.09□□□□□ -1.43
COL4A5-205ENST00000483338 ATRXP46100 2492 aa6.09□□□□□ -1.43
COL4A5-205ENST00000483338 WNK2Q9Y3S1 2297 aa6.09□□□□□ -1.44
COL4A5-205ENST00000483338 C1orf229Q6ZS94 237 aaPredicted RBP6.08□□□□□ -1.44
COL4A5-205ENST00000483338 LINC00336Q6ZUF6 198 aa6.08□□□□□ -1.44
COL4A5-205ENST00000483338 WDR86Q86TI4 376 aa6.08□□□□□ -1.44
COL4A5-205ENST00000483338 S1PR3Q99500 378 aa6.08□□□□□ -1.44
COL4A5-205ENST00000483338 IGHV3-48P01763 117 aa6.08□□□□□ -1.44
COL4A5-205ENST00000483338 TFF1P04155 84 aa6.08□□□□□ -1.44
COL4A5-205ENST00000483338 RNASE2P10153 161 aaKnown RBP6.08□□□□□ -1.44
COL4A5-205ENST00000483338 HOXB4P17483 251 aaPredicted RBP6.08□□□□□ -1.44
COL4A5-205ENST00000483338 FOLR3P41439 243 aa6.08□□□□□ -1.44
COL4A5-205ENST00000483338 HOXA4Q00056 320 aaPredicted RBP6.08□□□□□ -1.44
COL4A5-205ENST00000483338 C2orf83Q53S99 150 aa6.08□□□□□ -1.44
COL4A5-205ENST00000483338 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.08□□□□□ -1.44
COL4A5-205ENST00000483338 ARFGEF3Q5TH69 2177 aa6.08□□□□□ -1.44
COL4A5-205ENST00000483338 TRAV41A0A0B4J266 112 aa6.08□□□□□ -1.44
COL4A5-205ENST00000483338 EIF4EBP3O60516 100 aaPredicted RBP6.08□□□□□ -1.44
COL4A5-205ENST00000483338 COX6B1P14854 86 aa6.08□□□□□ -1.44
COL4A5-205ENST00000483338 CNTFRP26992 372 aa6.08□□□□□ -1.44
COL4A5-205ENST00000483338 SRXN1Q9BYN0 137 aa6.08□□□□□ -1.44
COL4A5-205ENST00000483338 NXT2Q9NPJ8 142 aaKnown RBP6.08□□□□□ -1.44
COL4A5-205ENST00000483338 FREM2Q5SZK8 3169 aa6.07□□□□□ -1.44
COL4A5-205ENST00000483338 IGKV1D-37A0A075B6S9 117 aa6.07□□□□□ -1.44
COL4A5-205ENST00000483338 TRBV10-2A0A0K0K1G8 114 aa6.07□□□□□ -1.44
COL4A5-205ENST00000483338 TRACP01848 142 aa6.07□□□□□ -1.44
COL4A5-205ENST00000483338 GP9P14770 177 aa6.07□□□□□ -1.44
COL4A5-205ENST00000483338 SLC25A16P16260 332 aa6.07□□□□□ -1.44
COL4A5-205ENST00000483338 RNF152Q8N8N0 203 aa6.07□□□□□ -1.44
COL4A5-205ENST00000483338 RNF185Q96GF1 192 aa6.07□□□□□ -1.44
COL4A5-205ENST00000483338 VKORC1Q9BQB6 163 aa6.07□□□□□ -1.44
COL4A5-205ENST00000483338 PLXNB1O43157 2135 aa6.07□□□□□ -1.44
COL4A5-205ENST00000483338 CACNA1BQ00975 2339 aa6.07□□□□□ -1.44
COL4A5-205ENST00000483338 K7ENP7 123 aa6.07□□□□□ -1.44
COL4A5-205ENST00000483338 GATA1P15976 413 aaPredicted RBP6.07□□□□□ -1.44
COL4A5-205ENST00000483338 PRCDQ00LT1 54 aa6.07□□□□□ -1.44
COL4A5-205ENST00000483338 C17orf82Q86X59 251 aaPredicted RBP6.07□□□□□ -1.44
COL4A5-205ENST00000483338 EXOC3-AS1Q8N2X6 119 aa6.07□□□□□ -1.44
COL4A5-205ENST00000483338 KLHL30-AS1Q8NEE0 82 aa6.07□□□□□ -1.44
COL4A5-205ENST00000483338 DCTN5Q9BTE1 182 aa6.07□□□□□ -1.44
COL4A5-205ENST00000483338 ZNF71Q9NQZ8 489 aaPredicted RBP6.07□□□□□ -1.44
COL4A5-205ENST00000483338 F8VRH5 84 aa6.07□□□□□ -1.44
COL4A5-205ENST00000483338 ENSAO43768 121 aaKnown RBP6.07□□□□□ -1.44
COL4A5-205ENST00000483338 SS18L1O75177 396 aaPredicted RBP6.07□□□□□ -1.44
COL4A5-205ENST00000483338 IGHV3-30P01768 117 aa6.07□□□□□ -1.44
COL4A5-205ENST00000483338 IGHV4-39P01824 125 aa6.07□□□□□ -1.44
COL4A5-205ENST00000483338 IGHV3-30-5P0DP03 117 aa6.07□□□□□ -1.44
COL4A5-205ENST00000483338 CD59P13987 128 aa6.07□□□□□ -1.44
COL4A5-205ENST00000483338 TMEM258P61165 79 aa6.07□□□□□ -1.44
COL4A5-205ENST00000483338 CFHR1Q03591 330 aa6.07□□□□□ -1.44
COL4A5-205ENST00000483338 CNEP1R1Q8N9A8 125 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms