RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 C20orf144Q9BQM9 153 aa9.06□□□□□ -0.96
COL21A1-209ENST00000482933 PRM2P04554 102 aa9.05□□□□□ -0.96
COL21A1-209ENST00000482933 SNRPCP09234 159 aaKnown RBP9.05□□□□□ -0.96
COL21A1-209ENST00000482933 IGLC2P0DOY2 106 aa9.05□□□□□ -0.96
COL21A1-209ENST00000482933 FGF7P21781 194 aa9.05□□□□□ -0.96
COL21A1-209ENST00000482933 C10orf91Q5T1B1 145 aa9.05□□□□□ -0.96
COL21A1-209ENST00000482933 MORN5Q5VZ52 161 aa9.05□□□□□ -0.96
COL21A1-209ENST00000482933 C15orf53Q8NAA6 179 aa9.05□□□□□ -0.96
COL21A1-209ENST00000482933 C16orf74Q96GX8 76 aa9.05□□□□□ -0.96
COL21A1-209ENST00000482933 SLC39A9Q9NUM3 307 aa9.05□□□□□ -0.96
COL21A1-209ENST00000482933 H7BYZ3 331 aa9.05□□□□□ -0.96
COL21A1-209ENST00000482933 SLC17A3O00476 420 aa9.05□□□□□ -0.96
COL21A1-209ENST00000482933 HTN1P15515 57 aa9.05□□□□□ -0.96
COL21A1-209ENST00000482933 AZU1P20160 251 aa9.05□□□□□ -0.96
COL21A1-209ENST00000482933 LGALS9BQ3B8N2 356 aa9.05□□□□□ -0.96
COL21A1-209ENST00000482933 ACOT6Q3I5F7 207 aaPredicted RBP9.05□□□□□ -0.96
COL21A1-209ENST00000482933 RNF212Q495C1 297 aa9.05□□□□□ -0.96
COL21A1-209ENST00000482933 TMEM88Q6PEY1 159 aa9.05□□□□□ -0.96
COL21A1-209ENST00000482933 ZNF493Q6ZR52 646 aa9.05□□□□□ -0.96
COL21A1-209ENST00000482933 SFT2D1Q8WV19 159 aa9.05□□□□□ -0.96
COL21A1-209ENST00000482933 MBD3L1Q8WWY6 194 aa9.05□□□□□ -0.96
COL21A1-209ENST00000482933 NPCDR1Q9BY65 106 aa9.05□□□□□ -0.96
COL21A1-209ENST00000482933 NKX6-2Q9C056 277 aaPredicted RBP9.05□□□□□ -0.96
COL21A1-209ENST00000482933 ACTR3CQ9C0K3 210 aaPredicted RBP9.05□□□□□ -0.96
COL21A1-209ENST00000482933 AP5S1Q9NUS5 200 aa9.05□□□□□ -0.96
COL21A1-209ENST00000482933 H3BQ15 152 aa9.04□□□□□ -0.96
COL21A1-209ENST00000482933 H3BTX0 84 aa9.04□□□□□ -0.96
COL21A1-209ENST00000482933 ZNF253O75346 499 aa9.04□□□□□ -0.96
COL21A1-209ENST00000482933 DEFB130BP0DP73 79 aa9.04□□□□□ -0.96
COL21A1-209ENST00000482933 DEFB130AP0DP74 79 aa9.04□□□□□ -0.96
COL21A1-209ENST00000482933 KHDC3LQ587J8 217 aa9.04□□□□□ -0.96
COL21A1-209ENST00000482933 TIMM8BQ9Y5J9 83 aaPredicted RBP9.04□□□□□ -0.96
COL21A1-209ENST00000482933 DNAH17Q9UFH2 4485 aa9.03□□□□□ -0.96
COL21A1-209ENST00000482933 TRAV5A0A0B4J249 113 aa9.03□□□□□ -0.96
COL21A1-209ENST00000482933 PLAC8L1A1L4L8 177 aa9.03□□□□□ -0.96
COL21A1-209ENST00000482933 RBFOX3A6NFN3 312 aa9.03□□□□□ -0.96
COL21A1-209ENST00000482933 M0R2N4 97 aa9.03□□□□□ -0.96
COL21A1-209ENST00000482933 ATP5G1P05496 136 aa9.03□□□□□ -0.96
COL21A1-209ENST00000482933 SFTA3P0C7M3 94 aa9.03□□□□□ -0.96
COL21A1-209ENST00000482933 PRB4P10163 310 aaPredicted RBP9.03□□□□□ -0.96
COL21A1-209ENST00000482933 ATP5G3P48201 142 aa9.03□□□□□ -0.96
COL21A1-209ENST00000482933 OR10G4Q8NGN3 311 aa9.03□□□□□ -0.96
COL21A1-209ENST00000482933 TMEM263Q8WUH6 116 aaKnown RBP9.03□□□□□ -0.96
COL21A1-209ENST00000482933 KRTAP9-3Q9BYQ3 159 aa9.03□□□□□ -0.96
COL21A1-209ENST00000482933 PRELID1Q9Y255 219 aa9.03□□□□□ -0.96
COL21A1-209ENST00000482933 CBY3A6NI87 242 aa9.02□□□□□ -0.97
COL21A1-209ENST00000482933 PRAC2D3DTV9 90 aa9.02□□□□□ -0.97
COL21A1-209ENST00000482933 F5H768 121 aa9.02□□□□□ -0.97
COL21A1-209ENST00000482933 LEPP41159 167 aa9.02□□□□□ -0.97
COL21A1-209ENST00000482933 SOHLH1Q5JUK2 328 aa9.02□□□□□ -0.97
COL21A1-209ENST00000482933 MRPL53Q96EL3 112 aaKnown RBP9.02□□□□□ -0.97
COL21A1-209ENST00000482933 ODF3Q96PU9 254 aa9.02□□□□□ -0.97
COL21A1-209ENST00000482933 TXNDC17Q9BRA2 123 aa9.02□□□□□ -0.97
COL21A1-209ENST00000482933 ZNF586Q9NXT0 402 aa9.02□□□□□ -0.97
COL21A1-209ENST00000482933 TMEM14CQ9P0S9 112 aa9.02□□□□□ -0.97
COL21A1-209ENST00000482933 FAT2Q9NYQ8 4349 aa9.01□□□□□ -0.97
COL21A1-209ENST00000482933 TRBV19A0A075B6N1 114 aa9.01□□□□□ -0.97
COL21A1-209ENST00000482933 CTXND1A0A1B0GTU2 59 aa9.01□□□□□ -0.97
COL21A1-209ENST00000482933 HIST1H1EP10412 219 aaKnown RBP9.01□□□□□ -0.97
COL21A1-209ENST00000482933 FHITP49789 147 aa9.01□□□□□ -0.97
COL21A1-209ENST00000482933 FAM3BP58499 235 aaPredicted RBP9.01□□□□□ -0.97
COL21A1-209ENST00000482933 PDE6HQ13956 83 aa9.01□□□□□ -0.97
COL21A1-209ENST00000482933 KIR3DS1Q14943 382 aa9.01□□□□□ -0.97
COL21A1-209ENST00000482933 ANKRD39Q53RE8 183 aa9.01□□□□□ -0.97
COL21A1-209ENST00000482933 FFAR4Q5NUL3 377 aa9.01□□□□□ -0.97
COL21A1-209ENST00000482933 RNASE8Q8TDE3 154 aaKnown RBP9.01□□□□□ -0.97
COL21A1-209ENST00000482933 MANBALQ9NQG1 85 aa9.01□□□□□ -0.97
COL21A1-209ENST00000482933 HECTD4Q9Y4D8 3996 aa9.01□□□□□ -0.97
COL21A1-209ENST00000482933 A0A1W2PPV4 95 aa9□□□□□ -0.97
COL21A1-209ENST00000482933 HMGB3O15347 200 aaKnown RBP9□□□□□ -0.97
COL21A1-209ENST00000482933 RHEBQ15382 184 aa9□□□□□ -0.97
COL21A1-209ENST00000482933 GFI1BQ5VTD9 330 aa9□□□□□ -0.97
COL21A1-209ENST00000482933 OR10G9Q8NGN4 311 aa9□□□□□ -0.97
COL21A1-209ENST00000482933 OR10G7Q8NGN6 311 aa9□□□□□ -0.97
COL21A1-209ENST00000482933 ATG101Q9BSB4 218 aa9□□□□□ -0.97
COL21A1-209ENST00000482933 NOP10Q9NPE3 64 aaKnown RBP9□□□□□ -0.97
COL21A1-209ENST00000482933 IGLV2-18A0A075B6J9 118 aa8.99□□□□□ -0.97
COL21A1-209ENST00000482933 PRSS29PA6NIE9 313 aa8.99□□□□□ -0.97
COL21A1-209ENST00000482933 J3KRW8 73 aa8.99□□□□□ -0.97
COL21A1-209ENST00000482933 CT45A10P0DMU9 189 aa8.99□□□□□ -0.97
COL21A1-209ENST00000482933 PNRC1Q12796 327 aaPredicted RBP8.99□□□□□ -0.97
COL21A1-209ENST00000482933 BTN1A1Q13410 526 aa8.99□□□□□ -0.97
COL21A1-209ENST00000482933 FAM74A3Q4VXF1 159 aa8.99□□□□□ -0.97
COL21A1-209ENST00000482933 ZNF506Q5JVG8 444 aa8.99□□□□□ -0.97
COL21A1-209ENST00000482933 AAMDCQ9H7C9 122 aa8.99□□□□□ -0.97
COL21A1-209ENST00000482933 SMCO4Q9NRQ5 59 aa8.99□□□□□ -0.97
COL21A1-209ENST00000482933 VAX2Q9UIW0 290 aa8.99□□□□□ -0.97
COL21A1-209ENST00000482933 MAP1LC3B2A6NCE7 125 aa8.98□□□□□ -0.97
COL21A1-209ENST00000482933 SNURFLB1AK76 121 aa8.98□□□□□ -0.97
COL21A1-209ENST00000482933 B4DEV8 164 aa8.98□□□□□ -0.97
COL21A1-209ENST00000482933 NUDT3O95989 172 aa8.98□□□□□ -0.97
COL21A1-209ENST00000482933 SLC25A5P05141 298 aaKnown RBP8.98□□□□□ -0.97
COL21A1-209ENST00000482933 Q6ZR54 194 aa8.98□□□□□ -0.97
COL21A1-209ENST00000482933 BLNKQ8WV28 456 aa8.98□□□□□ -0.97
COL21A1-209ENST00000482933 LINC00477Q96M19 166 aa8.98□□□□□ -0.97
COL21A1-209ENST00000482933 PYGO2Q9BRQ0 406 aa8.98□□□□□ -0.97
COL21A1-209ENST00000482933 MAP1LC3BQ9GZQ8 125 aa8.98□□□□□ -0.97
COL21A1-209ENST00000482933 TRAV12-3A0A0B4J271 114 aa8.97□□□□□ -0.97
COL21A1-209ENST00000482933 M0R3E3 92 aa8.97□□□□□ -0.97
COL21A1-209ENST00000482933 RTL8CO15255 209 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms