RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 ERVK-16P61578 105 aa7.73□□□□□ -1.17
HLA-DQA1-206ENST00000482745 NUP35Q8NFH5 326 aa7.73□□□□□ -1.17
HLA-DQA1-206ENST00000482745 OR1B1Q8NGR6 318 aa7.73□□□□□ -1.17
HLA-DQA1-206ENST00000482745 OSR1Q8TAX0 266 aaPredicted RBP7.73□□□□□ -1.17
HLA-DQA1-206ENST00000482745 OR51B2Q9Y5P1 312 aa7.73□□□□□ -1.17
HLA-DQA1-206ENST00000482745 IGHV4OR15-8A0A075B7B6 117 aa7.73□□□□□ -1.17
HLA-DQA1-206ENST00000482745 A0A087WW49 117 aa7.73□□□□□ -1.17
HLA-DQA1-206ENST00000482745 IGHV1-24A0A0C4DH33 117 aa7.73□□□□□ -1.17
HLA-DQA1-206ENST00000482745 LINC01619G3V211 115 aa7.73□□□□□ -1.17
HLA-DQA1-206ENST00000482745 SAA1P0DJI8 122 aaPredicted RBP7.73□□□□□ -1.17
HLA-DQA1-206ENST00000482745 SMIM17P0DL12 118 aa7.73□□□□□ -1.17
HLA-DQA1-206ENST00000482745 GATA2P23769 480 aaPredicted RBP7.73□□□□□ -1.17
HLA-DQA1-206ENST00000482745 GDF5OSQ5U4N7 250 aa7.73□□□□□ -1.17
HLA-DQA1-206ENST00000482745 TEX45Q8NA69 505 aa7.73□□□□□ -1.17
HLA-DQA1-206ENST00000482745 AP1S3Q96PC3 154 aa7.73□□□□□ -1.17
HLA-DQA1-206ENST00000482745 MAP1LC3CQ9BXW4 147 aa7.73□□□□□ -1.17
HLA-DQA1-206ENST00000482745 TP73-AS1Q9UF72 201 aa7.73□□□□□ -1.17
HLA-DQA1-206ENST00000482745 CA1P00915 261 aaPredicted RBP7.72□□□□□ -1.17
HLA-DQA1-206ENST00000482745 NHLRC2Q8NBF2 726 aa7.72□□□□□ -1.17
HLA-DQA1-206ENST00000482745 URB1-AS1Q96HZ7 61 aa7.72□□□□□ -1.17
HLA-DQA1-206ENST00000482745 TNCP24821 2201 aa7.72□□□□□ -1.17
HLA-DQA1-206ENST00000482745 A0A1B0GXF2 115 aa7.72□□□□□ -1.17
HLA-DQA1-206ENST00000482745 A6NDN8 102 aa7.72□□□□□ -1.17
HLA-DQA1-206ENST00000482745 C9orf118A6NHY6 69 aa7.72□□□□□ -1.17
HLA-DQA1-206ENST00000482745 K7EP34 96 aa7.72□□□□□ -1.17
HLA-DQA1-206ENST00000482745 OVOL1O14753 267 aa7.72□□□□□ -1.17
HLA-DQA1-206ENST00000482745 ACTL6BO94805 426 aa7.72□□□□□ -1.17
HLA-DQA1-206ENST00000482745 COX8AP10176 69 aa7.72□□□□□ -1.17
HLA-DQA1-206ENST00000482745 HIST1H1EP10412 219 aaKnown RBP7.72□□□□□ -1.17
HLA-DQA1-206ENST00000482745 MRGPRG-AS1Q2M3A8 158 aa7.72□□□□□ -1.17
HLA-DQA1-206ENST00000482745 NEGR1Q7Z3B1 354 aa7.72□□□□□ -1.17
HLA-DQA1-206ENST00000482745 BPIFA4PQ86YQ2 179 aa7.72□□□□□ -1.17
HLA-DQA1-206ENST00000482745 VKORC1L1Q8N0U8 176 aa7.72□□□□□ -1.17
HLA-DQA1-206ENST00000482745 C5orf17Q8NAS9 161 aa7.72□□□□□ -1.17
HLA-DQA1-206ENST00000482745 SRSF12Q8WXF0 261 aaKnown RBP7.72□□□□□ -1.17
HLA-DQA1-206ENST00000482745 DLX4Q92988 240 aaPredicted RBP7.72□□□□□ -1.17
HLA-DQA1-206ENST00000482745 PRR25Q96S07 402 aa7.72□□□□□ -1.17
HLA-DQA1-206ENST00000482745 HSPB8Q9UJY1 196 aa7.72□□□□□ -1.17
HLA-DQA1-206ENST00000482745 A0A087X0K7 114 aa7.71□□□□□ -1.18
HLA-DQA1-206ENST00000482745 FAM231BA6NCW3 169 aa7.71□□□□□ -1.18
HLA-DQA1-206ENST00000482745 H3BRM9 83 aa7.71□□□□□ -1.18
HLA-DQA1-206ENST00000482745 H3BUA1 57 aa7.71□□□□□ -1.18
HLA-DQA1-206ENST00000482745 HBBP68871 147 aa7.71□□□□□ -1.18
HLA-DQA1-206ENST00000482745 SAMD13Q5VXD3 122 aa7.71□□□□□ -1.18
HLA-DQA1-206ENST00000482745 OR5A1Q8NGJ0 315 aa7.71□□□□□ -1.18
HLA-DQA1-206ENST00000482745 ZNF503Q96F45 646 aa7.71□□□□□ -1.18
HLA-DQA1-206ENST00000482745 HIGD1CA8MV81 97 aa7.7□□□□□ -1.18
HLA-DQA1-206ENST00000482745 KIR2DS2P43631 304 aa7.7□□□□□ -1.18
HLA-DQA1-206ENST00000482745 TMEM97Q5BJF2 176 aa7.7□□□□□ -1.18
HLA-DQA1-206ENST00000482745 C10orf55Q5SWW7 151 aa7.7□□□□□ -1.18
HLA-DQA1-206ENST00000482745 C2orf91Q6ZV80 131 aa7.7□□□□□ -1.18
HLA-DQA1-206ENST00000482745 MRPL32Q9BYC8 188 aaKnown RBP7.7□□□□□ -1.18
HLA-DQA1-206ENST00000482745 A0A0G2JLM5 398 aa7.7□□□□□ -1.18
HLA-DQA1-206ENST00000482745 C15orf61A6NNL5 157 aa7.7□□□□□ -1.18
HLA-DQA1-206ENST00000482745 PSG3Q16557 428 aa7.7□□□□□ -1.18
HLA-DQA1-206ENST00000482745 SSBP4Q9BWG4 385 aaPredicted RBP7.7□□□□□ -1.18
HLA-DQA1-206ENST00000482745 ENY2Q9NPA8 101 aa7.7□□□□□ -1.18
HLA-DQA1-206ENST00000482745 COL7A1Q02388 2944 aa7.69□□□□□ -1.18
HLA-DQA1-206ENST00000482745 C8orf88P0DMB2 117 aa7.69□□□□□ -1.18
HLA-DQA1-206ENST00000482745 CAMPP49913 170 aa7.69□□□□□ -1.18
HLA-DQA1-206ENST00000482745 INSL3P51460 131 aa7.69□□□□□ -1.18
HLA-DQA1-206ENST00000482745 CD69Q07108 199 aa7.69□□□□□ -1.18
HLA-DQA1-206ENST00000482745 LINC01545Q5VT33 79 aa7.69□□□□□ -1.18
HLA-DQA1-206ENST00000482745 VSTM2AQ8TAG5 236 aa7.69□□□□□ -1.18
HLA-DQA1-206ENST00000482745 TMEM140Q9NV12 185 aa7.69□□□□□ -1.18
HLA-DQA1-206ENST00000482745 SMPXQ9UHP9 88 aa7.69□□□□□ -1.18
HLA-DQA1-206ENST00000482745 FNDC4Q9H6D8 234 aaPredicted RBP7.69□□□□□ -1.18
HLA-DQA1-206ENST00000482745 ZNF256Q9Y2P7 627 aaPredicted RBP7.69□□□□□ -1.18
HLA-DQA1-206ENST00000482745 A0A1B0GV72 72 aa7.68□□□□□ -1.18
HLA-DQA1-206ENST00000482745 CT83Q5H943 113 aa7.68□□□□□ -1.18
HLA-DQA1-206ENST00000482745 LINC00173Q6ZV60 143 aa7.68□□□□□ -1.18
HLA-DQA1-206ENST00000482745 OR2K2Q8NGT1 345 aa7.68□□□□□ -1.18
HLA-DQA1-206ENST00000482745 PEX7O00628 323 aa7.67□□□□□ -1.18
HLA-DQA1-206ENST00000482745 RPL27AP46776 148 aaKnown RBP7.67□□□□□ -1.18
HLA-DQA1-206ENST00000482745 ATP5IP56385 69 aaPredicted RBP7.67□□□□□ -1.18
HLA-DQA1-206ENST00000482745 HSPE1P61604 102 aaKnown RBP7.67□□□□□ -1.18
HLA-DQA1-206ENST00000482745 UBE2L3P68036 154 aaKnown RBP7.67□□□□□ -1.18
HLA-DQA1-206ENST00000482745 OR10AG1Q8NH19 301 aa7.67□□□□□ -1.18
HLA-DQA1-206ENST00000482745 TMEM167AQ8TBQ9 72 aa7.67□□□□□ -1.18
HLA-DQA1-206ENST00000482745 USMG5Q96IX5 58 aa7.67□□□□□ -1.18
HLA-DQA1-206ENST00000482745 B9D2Q9BPU9 175 aa7.67□□□□□ -1.18
HLA-DQA1-206ENST00000482745 NDFIP1Q9BT67 221 aa7.67□□□□□ -1.18
HLA-DQA1-206ENST00000482745 TMEM14BQ9NUH8 114 aa7.67□□□□□ -1.18
HLA-DQA1-206ENST00000482745 SORL1Q92673 2214 aa7.67□□□□□ -1.18
HLA-DQA1-206ENST00000482745 BRI3O95415 125 aa7.67□□□□□ -1.18
HLA-DQA1-206ENST00000482745 TRBV12-3P01733 135 aa7.67□□□□□ -1.18
HLA-DQA1-206ENST00000482745 PLP1P60201 277 aa7.67□□□□□ -1.18
HLA-DQA1-206ENST00000482745 TRAV3A0A0B4J244 114 aa7.66□□□□□ -1.18
HLA-DQA1-206ENST00000482745 A8MWL6 223 aa7.66□□□□□ -1.18
HLA-DQA1-206ENST00000482745 TEX22C9J3V5 150 aa7.66□□□□□ -1.18
HLA-DQA1-206ENST00000482745 H3BUT2 72 aa7.66□□□□□ -1.18
HLA-DQA1-206ENST00000482745 MYOD1P15172 320 aa7.66□□□□□ -1.18
HLA-DQA1-206ENST00000482745 HSD52Q0P140 79 aa7.66□□□□□ -1.18
HLA-DQA1-206ENST00000482745 GFRA4Q9GZZ7 299 aa7.66□□□□□ -1.18
HLA-DQA1-206ENST00000482745 DNAH9Q9NYC9 4486 aa7.66□□□□□ -1.18
HLA-DQA1-206ENST00000482745 FAM223BA6NKX1 122 aa7.66□□□□□ -1.18
HLA-DQA1-206ENST00000482745 E7EUB6 86 aa7.66□□□□□ -1.18
HLA-DQA1-206ENST00000482745 SIVA1O15304 175 aa7.66□□□□□ -1.18
HLA-DQA1-206ENST00000482745 FOXA3P55318 350 aaPredicted RBP7.66□□□□□ -1.18
HLA-DQA1-206ENST00000482745 SYNJ2BPP57105 145 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms