RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 IGHV1OR15-1A0A075B7D0 117 aa11.63□□□□□ -0.55
VAMP4-204ENST00000482519 TRGV1A0A0A0MS02 117 aa11.63□□□□□ -0.55
VAMP4-204ENST00000482519 G3V3Q6 166 aa11.63□□□□□ -0.55
VAMP4-204ENST00000482519 GCHFRP30047 84 aa11.63□□□□□ -0.55
VAMP4-204ENST00000482519 DAZ2Q13117 558 aaKnown RBP11.63□□□□□ -0.55
VAMP4-204ENST00000482519 ANXA2RQ3ZCQ2 193 aa11.63□□□□□ -0.55
VAMP4-204ENST00000482519 MUC21Q5SSG8 566 aa11.63□□□□□ -0.55
VAMP4-204ENST00000482519 LINC00612Q8N6U2 182 aa11.63□□□□□ -0.55
VAMP4-204ENST00000482519 C11orf72Q8NBR9 251 aa11.63□□□□□ -0.55
VAMP4-204ENST00000482519 LINC00467Q9BRT7 94 aa11.63□□□□□ -0.55
VAMP4-204ENST00000482519 ATG101Q9BSB4 218 aa11.63□□□□□ -0.55
VAMP4-204ENST00000482519 KLF12Q9Y4X4 402 aa11.63□□□□□ -0.55
VAMP4-204ENST00000482519 DNAH6Q9C0G6 4158 aa11.62□□□□□ -0.55
VAMP4-204ENST00000482519 IGLV2-18A0A075B6J9 118 aa11.62□□□□□ -0.55
VAMP4-204ENST00000482519 TRGV2A0A075B6R0 118 aa11.62□□□□□ -0.55
VAMP4-204ENST00000482519 TRBV7-9A0A0J9YWB2 115 aa11.62□□□□□ -0.55
VAMP4-204ENST00000482519 TMPRSS5Q9H3S3 457 aa11.62□□□□□ -0.55
VAMP4-204ENST00000482519 FRAS1Q86XX4 4008 aa11.62□□□□□ -0.55
VAMP4-204ENST00000482519 TRAV26-1A0A087WT03 109 aa11.61□□□□□ -0.55
VAMP4-204ENST00000482519 TRAV8-1A0A0A6YYK1 113 aa11.61□□□□□ -0.55
VAMP4-204ENST00000482519 A0A0J9YY99 117 aa11.61□□□□□ -0.55
VAMP4-204ENST00000482519 CXorf1O96002 111 aa11.61□□□□□ -0.55
VAMP4-204ENST00000482519 RNF212Q495C1 297 aa11.61□□□□□ -0.55
VAMP4-204ENST00000482519 SSX7Q7RTT5 188 aa11.61□□□□□ -0.55
VAMP4-204ENST00000482519 SGK494Q96LW2 274 aa11.61□□□□□ -0.55
VAMP4-204ENST00000482519 NAGKQ9UJ70 344 aa11.61□□□□□ -0.55
VAMP4-204ENST00000482519 TAAR5O14804 337 aa11.6□□□□□ -0.55
VAMP4-204ENST00000482519 HOXA5P20719 270 aa11.6□□□□□ -0.55
VAMP4-204ENST00000482519 TCL1AP56279 114 aa11.6□□□□□ -0.55
VAMP4-204ENST00000482519 TMED6Q8WW62 240 aa11.6□□□□□ -0.55
VAMP4-204ENST00000482519 ST6GAL2Q96JF0 529 aa11.6□□□□□ -0.55
VAMP4-204ENST00000482519 TMEM167BQ9NRX6 74 aa11.6□□□□□ -0.55
VAMP4-204ENST00000482519 LENEPQ9Y5L5 61 aa11.6□□□□□ -0.55
VAMP4-204ENST00000482519 DNAH10Q8IVF4 4471 aa11.6□□□□□ -0.55
VAMP4-204ENST00000482519 F6UZH7 168 aa11.59□□□□□ -0.55
VAMP4-204ENST00000482519 SUMO1P63165 101 aaKnown RBP11.59□□□□□ -0.55
VAMP4-204ENST00000482519 AKR1C8PQ5T2L2 129 aa11.59□□□□□ -0.55
VAMP4-204ENST00000482519 FAM159AQ6UWV7 190 aa11.59□□□□□ -0.55
VAMP4-204ENST00000482519 TREM1Q9NP99 234 aa11.59□□□□□ -0.55
VAMP4-204ENST00000482519 MRPL16Q9NX20 251 aaKnown RBP11.59□□□□□ -0.55
VAMP4-204ENST00000482519 SPINK4O60575 86 aa11.58□□□□□ -0.56
VAMP4-204ENST00000482519 TCRAP04437 139 aa11.58□□□□□ -0.56
VAMP4-204ENST00000482519 ZNF415Q09FC8 603 aa11.58□□□□□ -0.56
VAMP4-204ENST00000482519 TMEM183BQ1AE95 376 aa11.58□□□□□ -0.56
VAMP4-204ENST00000482519 IBA57Q5T440 356 aaKnown RBP11.58□□□□□ -0.56
VAMP4-204ENST00000482519 Q6AWC8 147 aa11.58□□□□□ -0.56
VAMP4-204ENST00000482519 TMEM183AQ8IXX5 376 aa11.58□□□□□ -0.56
VAMP4-204ENST00000482519 ARL6IP6Q8N6S5 226 aa11.58□□□□□ -0.56
VAMP4-204ENST00000482519 C5orf17Q8NAS9 161 aa11.58□□□□□ -0.56
VAMP4-204ENST00000482519 SUN5Q8TC36 379 aa11.58□□□□□ -0.56
VAMP4-204ENST00000482519 CYTL1Q9NRR1 136 aa11.58□□□□□ -0.56
VAMP4-204ENST00000482519 MDFICQ9P1T7 246 aa11.58□□□□□ -0.56
VAMP4-204ENST00000482519 CTXND1A0A1B0GTU2 59 aa11.57□□□□□ -0.56
VAMP4-204ENST00000482519 K7EQM0 130 aa11.57□□□□□ -0.56
VAMP4-204ENST00000482519 IGHV3-53P01767 116 aa11.57□□□□□ -0.56
VAMP4-204ENST00000482519 FGF8P55075 233 aaPredicted RBP11.57□□□□□ -0.56
VAMP4-204ENST00000482519 CCL18P55774 89 aa11.57□□□□□ -0.56
VAMP4-204ENST00000482519 ZNF726P1Q15940 193 aa11.57□□□□□ -0.56
VAMP4-204ENST00000482519 TVP23CQ96ET8 276 aa11.57□□□□□ -0.56
VAMP4-204ENST00000482519 NDFIP1Q9BT67 221 aa11.57□□□□□ -0.56
VAMP4-204ENST00000482519 KRTAP3-3Q9BYR6 98 aa11.57□□□□□ -0.56
VAMP4-204ENST00000482519 KRTAP3-2Q9BYR7 98 aa11.57□□□□□ -0.56
VAMP4-204ENST00000482519 NACAE9PAV3 2078 aa11.56□□□□□ -0.56
VAMP4-204ENST00000482519 GGTLC3B5MD39 225 aa11.56□□□□□ -0.56
VAMP4-204ENST00000482519 UBE2G2P60604 165 aa11.56□□□□□ -0.56
VAMP4-204ENST00000482519 KRTAP17-1Q9BYP8 105 aa11.56□□□□□ -0.56
VAMP4-204ENST00000482519 EPDR1Q9UM22 224 aa11.56□□□□□ -0.56
VAMP4-204ENST00000482519 TRGV11A0A075B6L2 103 aa11.55□□□□□ -0.56
VAMP4-204ENST00000482519 TRAV21A0A0B4J279 112 aa11.55□□□□□ -0.56
VAMP4-204ENST00000482519 SERTM2A0A1B0GWG4 89 aa11.55□□□□□ -0.56
VAMP4-204ENST00000482519 IFNA7P01567 189 aa11.55□□□□□ -0.56
VAMP4-204ENST00000482519 PRNTQ86SH4 94 aa11.55□□□□□ -0.56
VAMP4-204ENST00000482519 PSG8Q9UQ74 426 aa11.55□□□□□ -0.56
VAMP4-204ENST00000482519 GNRH2O43555 120 aa11.54□□□□□ -0.56
VAMP4-204ENST00000482519 FAM3BP58499 235 aaPredicted RBP11.54□□□□□ -0.56
VAMP4-204ENST00000482519 LGALS9BQ3B8N2 356 aa11.54□□□□□ -0.56
VAMP4-204ENST00000482519 KCNRGQ8N5I3 272 aa11.54□□□□□ -0.56
VAMP4-204ENST00000482519 OR11H4Q8NGC9 324 aa11.54□□□□□ -0.56
VAMP4-204ENST00000482519 C8orf49Q96NF6 230 aa11.54□□□□□ -0.56
VAMP4-204ENST00000482519 LINC00588Q9Y4M8 146 aa11.54□□□□□ -0.56
VAMP4-204ENST00000482519 A0A1W2PRE2 83 aa11.53□□□□□ -0.56
VAMP4-204ENST00000482519 MAP1LC3B2A6NCE7 125 aa11.53□□□□□ -0.56
VAMP4-204ENST00000482519 FLI1Q01543 452 aaPredicted RBP11.53□□□□□ -0.56
VAMP4-204ENST00000482519 CYB561D1Q8N8Q1 229 aa11.53□□□□□ -0.56
VAMP4-204ENST00000482519 C18orf15Q96N68 181 aa11.53□□□□□ -0.56
VAMP4-204ENST00000482519 MAP1LC3BQ9GZQ8 125 aa11.53□□□□□ -0.56
VAMP4-204ENST00000482519 HMSDA8MTL9 139 aa11.52□□□□□ -0.57
VAMP4-204ENST00000482519 ZNF345Q14585 488 aa11.52□□□□□ -0.57
VAMP4-204ENST00000482519 TDRG1Q3Y452 100 aa11.52□□□□□ -0.57
VAMP4-204ENST00000482519 ZFP69Q49AA0 526 aa11.52□□□□□ -0.57
VAMP4-204ENST00000482519 VSIG2Q96IQ7 327 aa11.52□□□□□ -0.57
VAMP4-204ENST00000482519 LINC00479Q96M42 142 aa11.52□□□□□ -0.57
VAMP4-204ENST00000482519 ZNF471Q9BX82 626 aaPredicted RBP11.52□□□□□ -0.57
VAMP4-204ENST00000482519 SDF2L1Q9HCN8 221 aa11.52□□□□□ -0.57
VAMP4-204ENST00000482519 MUC4Q99102 2169 aa11.51□□□□□ -0.57
VAMP4-204ENST00000482519 TRAV34A0A0B4J273 112 aa11.51□□□□□ -0.57
VAMP4-204ENST00000482519 A0A0D9SG52 128 aa11.51□□□□□ -0.57
VAMP4-204ENST00000482519 KANTRA0A1W2PQU2 76 aa11.51□□□□□ -0.57
VAMP4-204ENST00000482519 H3BNG1 76 aa11.51□□□□□ -0.57
VAMP4-204ENST00000482519 GCGP01275 180 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms