RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 Q9H3A6 140 aa12.79□□□□□ -0.36
CLK1-211ENST00000481641 PTTG2Q9NZH5 202 aa12.79□□□□□ -0.36
CLK1-211ENST00000481641 UBE2L3P68036 154 aaKnown RBP12.78□□□□□ -0.36
CLK1-211ENST00000481641 MUC21Q5SSG8 566 aa12.78□□□□□ -0.36
CLK1-211ENST00000481641 IBA57Q5T440 356 aaKnown RBP12.78□□□□□ -0.36
CLK1-211ENST00000481641 ARPC5LQ9BPX5 153 aa12.78□□□□□ -0.36
CLK1-211ENST00000481641 WFDC1Q9HC57 220 aa12.78□□□□□ -0.36
CLK1-211ENST00000481641 RPL12P30050 165 aaKnown RBP12.77□□□□□ -0.37
CLK1-211ENST00000481641 CSN1S1P47710 185 aa12.77□□□□□ -0.37
CLK1-211ENST00000481641 TTC32Q5I0X7 151 aa12.77□□□□□ -0.37
CLK1-211ENST00000481641 ST6GAL2Q96JF0 529 aa12.77□□□□□ -0.37
CLK1-211ENST00000481641 MBD2Q9UBB5 411 aa12.77□□□□□ -0.37
CLK1-211ENST00000481641 ABCA13Q86UQ4 5058 aa12.77□□□□□ -0.37
CLK1-211ENST00000481641 PAX4O43316 350 aa12.76□□□□□ -0.37
CLK1-211ENST00000481641 IFNA5P01569 189 aa12.76□□□□□ -0.37
CLK1-211ENST00000481641 SPATA12Q7Z6I5 190 aa12.76□□□□□ -0.37
CLK1-211ENST00000481641 SCGB1C1Q8TD33 95 aa12.76□□□□□ -0.37
CLK1-211ENST00000481641 HYLS1Q96M11 299 aa12.76□□□□□ -0.37
CLK1-211ENST00000481641 DIRC3C9JPN6 131 aa12.75□□□□□ -0.37
CLK1-211ENST00000481641 ZNF266Q14584 549 aa12.75□□□□□ -0.37
CLK1-211ENST00000481641 KHDC3LQ587J8 217 aa12.75□□□□□ -0.37
CLK1-211ENST00000481641 LYPD1Q8N2G4 141 aa12.75□□□□□ -0.37
CLK1-211ENST00000481641 C8orf49Q96NF6 230 aa12.75□□□□□ -0.37
CLK1-211ENST00000481641 MDFICQ9P1T7 246 aa12.75□□□□□ -0.37
CLK1-211ENST00000481641 RPH3ALQ9UNE2 315 aa12.75□□□□□ -0.37
CLK1-211ENST00000481641 TRBV7-9A0A0J9YWB2 115 aa12.74□□□□□ -0.37
CLK1-211ENST00000481641 RBAKDNA6NC62 111 aa12.74□□□□□ -0.37
CLK1-211ENST00000481641 PET100P0DJ07 73 aa12.74□□□□□ -0.37
CLK1-211ENST00000481641 ZNF415Q09FC8 603 aa12.74□□□□□ -0.37
CLK1-211ENST00000481641 ICOSQ9Y6W8 199 aa12.74□□□□□ -0.37
CLK1-211ENST00000481641 A0A1W2PPQ1 181 aa12.73□□□□□ -0.37
CLK1-211ENST00000481641 CRYBA4P53673 196 aa12.73□□□□□ -0.37
CLK1-211ENST00000481641 TAS2R45P59539 299 aa12.73□□□□□ -0.37
CLK1-211ENST00000481641 DEFA1P59665 94 aa12.73□□□□□ -0.37
CLK1-211ENST00000481641 DEFA3P59666 94 aa12.73□□□□□ -0.37
CLK1-211ENST00000481641 FHL2Q14192 279 aa12.73□□□□□ -0.37
CLK1-211ENST00000481641 APOBP04114 4563 aaKnown RBP12.73□□□□□ -0.37
CLK1-211ENST00000481641 PGPA6NDG6 321 aa12.72□□□□□ -0.37
CLK1-211ENST00000481641 SFTA3P0C7M3 94 aa12.72□□□□□ -0.37
CLK1-211ENST00000481641 LINC00315P59091 139 aa12.72□□□□□ -0.37
CLK1-211ENST00000481641 KRTAP10-2P60368 255 aa12.72□□□□□ -0.37
CLK1-211ENST00000481641 RAB2AP61019 212 aa12.72□□□□□ -0.37
CLK1-211ENST00000481641 TMEM183BQ1AE95 376 aa12.72□□□□□ -0.37
CLK1-211ENST00000481641 TMEM183AQ8IXX5 376 aa12.72□□□□□ -0.37
CLK1-211ENST00000481641 PRO0255Q9UI72 69 aa12.72□□□□□ -0.37
CLK1-211ENST00000481641 HHLA3Q9XRX5 114 aa12.72□□□□□ -0.37
CLK1-211ENST00000481641 DNAH5Q8TE73 4624 aa12.72□□□□□ -0.37
CLK1-211ENST00000481641 SIVA1O15304 175 aa12.71□□□□□ -0.37
CLK1-211ENST00000481641 HMGB3O15347 200 aaKnown RBP12.71□□□□□ -0.37
CLK1-211ENST00000481641 NXPH4O95158 308 aa12.71□□□□□ -0.37
CLK1-211ENST00000481641 Q6AWC8 147 aa12.71□□□□□ -0.37
CLK1-211ENST00000481641 ZNF479Q96JC4 524 aa12.71□□□□□ -0.37
CLK1-211ENST00000481641 OTORQ9NRC9 128 aa12.71□□□□□ -0.37
CLK1-211ENST00000481641 NAGKQ9UJ70 344 aa12.71□□□□□ -0.37
CLK1-211ENST00000481641 CDK2AP2O75956 126 aa12.7□□□□□ -0.38
CLK1-211ENST00000481641 ACOT6Q3I5F7 207 aaPredicted RBP12.7□□□□□ -0.38
CLK1-211ENST00000481641 TNFRSF18Q9Y5U5 241 aa12.7□□□□□ -0.38
CLK1-211ENST00000481641 TRGV4A0A0C4DH28 118 aa12.69□□□□□ -0.38
CLK1-211ENST00000481641 GNRH2O43555 120 aa12.69□□□□□ -0.38
CLK1-211ENST00000481641 GNG5P63218 68 aa12.69□□□□□ -0.38
CLK1-211ENST00000481641 LYPD5Q6UWN5 251 aa12.69□□□□□ -0.38
CLK1-211ENST00000481641 FAM159AQ6UWV7 190 aa12.69□□□□□ -0.38
CLK1-211ENST00000481641 GOLT1AQ6ZVE7 132 aa12.69□□□□□ -0.38
CLK1-211ENST00000481641 CMTM2Q8TAZ6 248 aa12.69□□□□□ -0.38
CLK1-211ENST00000481641 TVP23CQ96ET8 276 aa12.69□□□□□ -0.38
CLK1-211ENST00000481641 LENEPQ9Y5L5 61 aa12.69□□□□□ -0.38
CLK1-211ENST00000481641 TRAV8-1A0A0A6YYK1 113 aa12.68□□□□□ -0.38
CLK1-211ENST00000481641 A0A1W2PPV4 95 aa12.68□□□□□ -0.38
CLK1-211ENST00000481641 F6UZH7 168 aa12.68□□□□□ -0.38
CLK1-211ENST00000481641 SLAQ13239 276 aa12.68□□□□□ -0.38
CLK1-211ENST00000481641 Q6ZRN7 208 aaPredicted RBP12.68□□□□□ -0.38
CLK1-211ENST00000481641 ALG5Q9Y673 324 aa12.68□□□□□ -0.38
CLK1-211ENST00000481641 TRGV11A0A075B6L2 103 aa12.67□□□□□ -0.38
CLK1-211ENST00000481641 BTF3P20290 206 aaKnown RBP12.67□□□□□ -0.38
CLK1-211ENST00000481641 MRPL23Q16540 153 aaKnown RBP12.67□□□□□ -0.38
CLK1-211ENST00000481641 PQLC2Q6ZP29 291 aa12.67□□□□□ -0.38
CLK1-211ENST00000481641 MAPKAPK5-AS1Q8N8E1 139 aa12.67□□□□□ -0.38
CLK1-211ENST00000481641 OR10G4Q8NGN3 311 aa12.67□□□□□ -0.38
CLK1-211ENST00000481641 OR10G9Q8NGN4 311 aa12.67□□□□□ -0.38
CLK1-211ENST00000481641 OR10G7Q8NGN6 311 aa12.67□□□□□ -0.38
CLK1-211ENST00000481641 TMED6Q8WW62 240 aa12.67□□□□□ -0.38
CLK1-211ENST00000481641 RASL10AQ92737 203 aa12.67□□□□□ -0.38
CLK1-211ENST00000481641 SGK494Q96LW2 274 aa12.67□□□□□ -0.38
CLK1-211ENST00000481641 SPXQ9BT56 116 aa12.67□□□□□ -0.38
CLK1-211ENST00000481641 K7EQD1 137 aa12.66□□□□□ -0.38
CLK1-211ENST00000481641 FUSP35637 526 aaKnown RBP eCLIP12.66□□□□□ -0.38
CLK1-211ENST00000481641 FAM74A1Q5RGS3 127 aa12.66□□□□□ -0.38
CLK1-211ENST00000481641 GYPEP15421 78 aa12.65□□□□□ -0.38
CLK1-211ENST00000481641 NEGR1Q7Z3B1 354 aa12.65□□□□□ -0.38
CLK1-211ENST00000481641 HSD17B11Q8NBQ5 300 aa12.65□□□□□ -0.38
CLK1-211ENST00000481641 TREM1Q9NP99 234 aa12.65□□□□□ -0.38
CLK1-211ENST00000481641 IGHV3-16A0A0C4DH30 117 aa12.64□□□□□ -0.39
CLK1-211ENST00000481641 TYMSP04818 313 aa12.64□□□□□ -0.39
CLK1-211ENST00000481641 ARL14EPLP0DKL9 152 aa12.64□□□□□ -0.39
CLK1-211ENST00000481641 TDRG1Q3Y452 100 aa12.64□□□□□ -0.39
CLK1-211ENST00000481641 IQCF2Q8IXL9 164 aa12.64□□□□□ -0.39
CLK1-211ENST00000481641 TRAV21A0A0B4J279 112 aa12.63□□□□□ -0.39
CLK1-211ENST00000481641 LOC100131303A0A0U1RQF7 123 aa12.63□□□□□ -0.39
CLK1-211ENST00000481641 SRIP30626 198 aa12.63□□□□□ -0.39
CLK1-211ENST00000481641 CDC34P49427 236 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms