RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 TRGV11A0A075B6L2 103 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 TRAV6A0A075B6T7 132 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 SERTM2A0A1B0GWG4 89 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 IGSF23A1L1A6 192 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 GYPEP15421 78 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 HTN1P15515 57 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 CSN1S1P47710 185 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 DEFA1P59665 94 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 DEFA3P59666 94 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 ERVFC1-1P60608 527 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 UBE2L3P68036 154 aaKnown RBP2.88□□□□□ -1.95
VPS13D-208ENST00000481484 ARL16Q0P5N6 197 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 RAB32Q13637 225 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 FAM74A1Q5RGS3 127 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 MIC13Q5XKP0 118 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 C9orf47Q6ZRZ4 202 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 SH2D6Q7Z4S9 175 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 NFE4Q86UQ8 179 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 C10orf126Q8N4M7 172 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 ARL6IP6Q8N6S5 226 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 C11orf72Q8NBR9 251 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 PCNPQ8WW12 178 aaKnown RBP2.88□□□□□ -1.95
VPS13D-208ENST00000481484 FAM19A4Q96LR4 140 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 ATP5SQ99766 215 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 MLST8Q9BVC4 326 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 PARD6GQ9BYG4 376 aaPredicted RBP2.88□□□□□ -1.95
VPS13D-208ENST00000481484 LINC00588Q9Y4M8 146 aa2.88□□□□□ -1.95
VPS13D-208ENST00000481484 IGHV1OR15-1A0A075B7D0 117 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 TRAV9-2A0A087WT02 112 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 TRGV1A0A0A0MS02 117 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 TRAV12-3A0A0B4J271 114 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 LINC00854A0A1B0GVQ3 168 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 GAGE12BA1L429 117 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 FBLL1A6NHQ2 334 aaKnown RBP2.87□□□□□ -1.95
VPS13D-208ENST00000481484 H3BQ15 152 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 SIVA1O15304 175 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 PLA2G10O15496 165 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 OR7C2O60412 319 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 CIDEAO60543 219 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 SPINK4O60575 86 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 GAGE7O76087 117 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 ORM1P02763 201 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 GPX1P07203 203 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 GAGE12FP0CL80 117 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 GAGE12GP0CL81 117 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 GAGE12IP0CL82 117 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 CT45A10P0DMU9 189 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 AZU1P20160 251 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 ZNF138P52744 262 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 IL15RAQ13261 267 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 OR5I1Q13606 314 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 ZNF266Q14584 549 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 MORN5Q5VZ52 161 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 Q6AWC8 147 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 PQLC2Q6ZP29 291 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 Q6ZTI0 123 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 ZNF575Q86XF7 245 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 OR5C1Q8NGR4 320 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 TXNDC17Q9BRA2 123 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 SEC22CQ9BRL7 303 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 SPXQ9BT56 116 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 PAXXQ9BUH6 204 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 SH3BGRL3Q9H299 93 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 Q9H8V8 135 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 ZNF586Q9NXT0 402 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 PRO0255Q9UI72 69 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 TP53TG3Q9ULZ0 132 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 FUT9Q9Y231 359 aa2.87□□□□□ -1.95
VPS13D-208ENST00000481484 A0A096LPF7 62 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 GAGE12HA6NDE8 117 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 FAM24AA6NFZ4 105 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 C9JCJ5 164 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 DIRC3C9JPN6 131 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 PRAC2D3DTV9 90 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 M0R3E3 92 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 ZNF324O75467 553 aaPredicted RBP2.86□□□□□ -1.95
VPS13D-208ENST00000481484 UPK1BO75841 260 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 NXPH4O95158 308 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 NDUFB4O95168 129 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 IFNA5P01569 189 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 NBEAP1P0C6P0 100 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 PYYP10082 97 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 SRIP30626 198 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 TIRAPP58753 221 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 LINC00315P59091 139 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 BTN1A1Q13410 526 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 MRPL23Q16540 153 aaKnown RBP2.86□□□□□ -1.95
VPS13D-208ENST00000481484 TDRG1Q3Y452 100 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 ZFP69Q49AA0 526 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 CT83Q5H943 113 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 ZFAND2AQ8N6M9 145 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 OR10G4Q8NGN3 311 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 CMTM2Q8TAZ6 248 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 THAP6Q8TBB0 222 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 BLNKQ8WV28 456 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 ASB13Q8WXK3 278 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 FXYD5Q96DB9 178 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 PHYHIPLQ96FC7 376 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 FAM167A-AS1Q96KT0 104 aa2.86□□□□□ -1.95
VPS13D-208ENST00000481484 NDFIP1Q9BT67 221 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms