RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 CD7P09564 240 aa7.52□□□□□ -1.21
USP39-215ENST00000481409 ERVFC1-1P60608 527 aa7.52□□□□□ -1.21
USP39-215ENST00000481409 IBA57Q5T440 356 aaKnown RBP7.52□□□□□ -1.21
USP39-215ENST00000481409 Q6AWC8 147 aa7.52□□□□□ -1.21
USP39-215ENST00000481409 TRPT1Q86TN4 253 aaKnown RBP7.52□□□□□ -1.21
USP39-215ENST00000481409 SGK494Q96LW2 274 aa7.52□□□□□ -1.21
USP39-215ENST00000481409 IMMP2LQ96T52 175 aa7.52□□□□□ -1.21
USP39-215ENST00000481409 C1QTNF4Q9BXJ3 329 aa7.52□□□□□ -1.21
USP39-215ENST00000481409 C7orf77A4D0Y5 90 aa7.51□□□□□ -1.21
USP39-215ENST00000481409 FAM231BA6NCW3 169 aa7.51□□□□□ -1.21
USP39-215ENST00000481409 A8MZ25 164 aa7.51□□□□□ -1.21
USP39-215ENST00000481409 K7EN84 100 aa7.51□□□□□ -1.21
USP39-215ENST00000481409 P01737 135 aa7.51□□□□□ -1.21
USP39-215ENST00000481409 CXCL1P09341 107 aa7.51□□□□□ -1.21
USP39-215ENST00000481409 RPS20P60866 119 aaKnown RBP7.51□□□□□ -1.21
USP39-215ENST00000481409 SAMD5Q5TGI4 173 aa7.51□□□□□ -1.21
USP39-215ENST00000481409 GDF5OSQ5U4N7 250 aa7.51□□□□□ -1.21
USP39-215ENST00000481409 AMTNQ6UX39 209 aa7.51□□□□□ -1.21
USP39-215ENST00000481409 ZFAND2AQ8N6M9 145 aa7.51□□□□□ -1.21
USP39-215ENST00000481409 OR10G8Q8NGN5 311 aa7.51□□□□□ -1.21
USP39-215ENST00000481409 Q8TAT8 98 aa7.51□□□□□ -1.21
USP39-215ENST00000481409 ZC2HC1AQ96GY0 325 aa7.51□□□□□ -1.21
USP39-215ENST00000481409 COL6A5A8TX70 2615 aa7.51□□□□□ -1.21
USP39-215ENST00000481409 SORL1Q92673 2214 aa7.51□□□□□ -1.21
USP39-215ENST00000481409 KIR2DL5BA0A0G2JN68 375 aa7.5□□□□□ -1.21
USP39-215ENST00000481409 KIR2DL5BA0A0G2JPC4 375 aa7.5□□□□□ -1.21
USP39-215ENST00000481409 C7orf71A4D174 169 aa7.5□□□□□ -1.21
USP39-215ENST00000481409 PGPEP1LA6NFU8 196 aa7.5□□□□□ -1.21
USP39-215ENST00000481409 KNCNA6PVL3 124 aa7.5□□□□□ -1.21
USP39-215ENST00000481409 A8MWL6 223 aa7.5□□□□□ -1.21
USP39-215ENST00000481409 ZNF705DP0CH99 300 aaPredicted RBP7.5□□□□□ -1.21
USP39-215ENST00000481409 ZNF705BP0CI00 300 aaPredicted RBP7.5□□□□□ -1.21
USP39-215ENST00000481409 KIR2DL5AQ8N109 375 aa7.5□□□□□ -1.21
USP39-215ENST00000481409 TMEM256Q8N2U0 113 aa7.5□□□□□ -1.21
USP39-215ENST00000481409 KIR2DL5BQ8NHK3 375 aa7.5□□□□□ -1.21
USP39-215ENST00000481409 BTF3L4Q96K17 158 aa7.5□□□□□ -1.21
USP39-215ENST00000481409 C8orf49Q96NF6 230 aa7.5□□□□□ -1.21
USP39-215ENST00000481409 GFRA4Q9GZZ7 299 aa7.5□□□□□ -1.21
USP39-215ENST00000481409 TUBA4BQ9H853 241 aa7.5□□□□□ -1.21
USP39-215ENST00000481409 RPS10P5Q9NQ39 176 aa7.5□□□□□ -1.21
USP39-215ENST00000481409 TRAV9-1A0A075B6T8 112 aa7.49□□□□□ -1.21
USP39-215ENST00000481409 H7BYZ3 331 aa7.49□□□□□ -1.21
USP39-215ENST00000481409 GATCO43716 136 aaKnown RBP7.49□□□□□ -1.21
USP39-215ENST00000481409 RPL19P84098 196 aaKnown RBP7.49□□□□□ -1.21
USP39-215ENST00000481409 RNF212Q495C1 297 aa7.49□□□□□ -1.21
USP39-215ENST00000481409 KPRPQ5T749 579 aaPredicted RBP7.49□□□□□ -1.21
USP39-215ENST00000481409 PRR27Q6MZM9 219 aa7.49□□□□□ -1.21
USP39-215ENST00000481409 Q8N1Y9 231 aa7.49□□□□□ -1.21
USP39-215ENST00000481409 NHLRC2Q8NBF2 726 aa7.49□□□□□ -1.21
USP39-215ENST00000481409 NUDT10Q8NFP7 164 aa7.49□□□□□ -1.21
USP39-215ENST00000481409 NUDT11Q96G61 164 aa7.49□□□□□ -1.21
USP39-215ENST00000481409 KCNS1Q96KK3 526 aa7.49□□□□□ -1.21
USP39-215ENST00000481409 LINC00467Q9BRT7 94 aa7.49□□□□□ -1.21
USP39-215ENST00000481409 RPP21Q9H633 154 aaKnown RBP7.49□□□□□ -1.21
USP39-215ENST00000481409 LOC102724200A0A096LPH7 203 aaPredicted RBP7.48□□□□□ -1.21
USP39-215ENST00000481409 ZNF705GA8MUZ8 300 aaPredicted RBP7.48□□□□□ -1.21
USP39-215ENST00000481409 UBE2CO00762 179 aa7.48□□□□□ -1.21
USP39-215ENST00000481409 SH2D1AO60880 128 aa7.48□□□□□ -1.21
USP39-215ENST00000481409 INSP01308 110 aa7.48□□□□□ -1.21
USP39-215ENST00000481409 S100PP25815 95 aa7.48□□□□□ -1.21
USP39-215ENST00000481409 CRIP1P50238 77 aa7.48□□□□□ -1.21
USP39-215ENST00000481409 APOC4P55056 127 aa7.48□□□□□ -1.21
USP39-215ENST00000481409 FOXA3P55318 350 aaPredicted RBP7.48□□□□□ -1.21
USP39-215ENST00000481409 DEFB1P60022 68 aa7.48□□□□□ -1.21
USP39-215ENST00000481409 OR5I1Q13606 314 aa7.48□□□□□ -1.21
USP39-215ENST00000481409 TDRG1Q3Y452 100 aa7.48□□□□□ -1.21
USP39-215ENST00000481409 KCNIP4Q6PIL6 250 aa7.48□□□□□ -1.21
USP39-215ENST00000481409 TSKUQ8WUA8 353 aa7.48□□□□□ -1.21
USP39-215ENST00000481409 SRD5A3Q9H8P0 318 aa7.48□□□□□ -1.21
USP39-215ENST00000481409 SMCO4Q9NRQ5 59 aa7.48□□□□□ -1.21
USP39-215ENST00000481409 V9GYV3 84 aa7.48□□□□□ -1.21
USP39-215ENST00000481409 STAB1Q9NY15 2570 aa7.47□□□□□ -1.21
USP39-215ENST00000481409 A0A1W2PPQ1 181 aa7.47□□□□□ -1.21
USP39-215ENST00000481409 TMEM189A5PLL7 270 aa7.47□□□□□ -1.21
USP39-215ENST00000481409 ZNF324O75467 553 aaPredicted RBP7.47□□□□□ -1.21
USP39-215ENST00000481409 RNASE4P34096 147 aaKnown RBP7.47□□□□□ -1.21
USP39-215ENST00000481409 SPINK13Q1W4C9 94 aa7.47□□□□□ -1.21
USP39-215ENST00000481409 DNLZQ5SXM8 178 aa7.47□□□□□ -1.21
USP39-215ENST00000481409 GFI1BQ5VTD9 330 aa7.47□□□□□ -1.21
USP39-215ENST00000481409 DEFB125Q8N687 156 aa7.47□□□□□ -1.21
USP39-215ENST00000481409 PYGO2Q9BRQ0 406 aa7.47□□□□□ -1.21
USP39-215ENST00000481409 CSTL1Q9H114 145 aa7.47□□□□□ -1.21
USP39-215ENST00000481409 RNASE7Q9H1E1 156 aaKnown RBP7.47□□□□□ -1.21
USP39-215ENST00000481409 AURKAIP1Q9NWT8 199 aaPredicted RBP7.47□□□□□ -1.21
USP39-215ENST00000481409 IL36BQ9NZH7 164 aa7.47□□□□□ -1.21
USP39-215ENST00000481409 SMIM27A0A1W2PRY6 76 aa7.46□□□□□ -1.22
USP39-215ENST00000481409 RBMY1BA6NDE4 496 aaKnown RBP7.46□□□□□ -1.22
USP39-215ENST00000481409 RBMY1EA6NEQ0 496 aaKnown RBP7.46□□□□□ -1.22
USP39-215ENST00000481409 M0R2Z0 102 aa7.46□□□□□ -1.22
USP39-215ENST00000481409 CRXO43186 299 aaPredicted RBP7.46□□□□□ -1.22
USP39-215ENST00000481409 IGKV3-20P01619 116 aa7.46□□□□□ -1.22
USP39-215ENST00000481409 RBMY1DP0C7P1 496 aaKnown RBP7.46□□□□□ -1.22
USP39-215ENST00000481409 MED14OSP0DP75 135 aa7.46□□□□□ -1.22
USP39-215ENST00000481409 ZNF80P51504 273 aaPredicted RBP7.46□□□□□ -1.22
USP39-215ENST00000481409 ZNF124Q15973 351 aa7.46□□□□□ -1.22
USP39-215ENST00000481409 FAM159AQ6UWV7 190 aa7.46□□□□□ -1.22
USP39-215ENST00000481409 LINC00322Q6ZN03 302 aaPredicted RBP7.46□□□□□ -1.22
USP39-215ENST00000481409 OR2D3Q8NGH3 330 aa7.46□□□□□ -1.22
USP39-215ENST00000481409 F2Z2F3 143 aa7.45□□□□□ -1.22
USP39-215ENST00000481409 G3V4G9 280 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms