RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 HYLS1Q96M11 299 aa11.91□□□□□ -0.5
HSPG2-209ENST00000480900 BORCS7-ASMTA0A0B4J1R7 106 aa11.9□□□□□ -0.5
HSPG2-209ENST00000480900 HMGB3O15347 200 aaKnown RBP11.9□□□□□ -0.5
HSPG2-209ENST00000480900 GNPNAT1Q96EK6 184 aaPredicted RBP11.9□□□□□ -0.5
HSPG2-209ENST00000480900 C18orf15Q96N68 181 aa11.9□□□□□ -0.5
HSPG2-209ENST00000480900 ATG101Q9BSB4 218 aa11.9□□□□□ -0.5
HSPG2-209ENST00000480900 OR5I1Q13606 314 aa11.89□□□□□ -0.51
HSPG2-209ENST00000480900 Q6AWC8 147 aa11.89□□□□□ -0.51
HSPG2-209ENST00000480900 Q6ZQT7 251 aa11.89□□□□□ -0.51
HSPG2-209ENST00000480900 LINC00336Q6ZUF6 198 aa11.89□□□□□ -0.51
HSPG2-209ENST00000480900 ARPC5LQ9BPX5 153 aa11.89□□□□□ -0.51
HSPG2-209ENST00000480900 SH3BGRL3Q9H299 93 aa11.89□□□□□ -0.51
HSPG2-209ENST00000480900 TMPRSS5Q9H3S3 457 aa11.89□□□□□ -0.51
HSPG2-209ENST00000480900 RPH3ALQ9UNE2 315 aa11.89□□□□□ -0.51
HSPG2-209ENST00000480900 TRAV26-1A0A087WT03 109 aa11.88□□□□□ -0.51
HSPG2-209ENST00000480900 TRGV1A0A0A0MS02 117 aa11.88□□□□□ -0.51
HSPG2-209ENST00000480900 G3V3Q6 166 aa11.88□□□□□ -0.51
HSPG2-209ENST00000480900 M0R2N4 97 aa11.88□□□□□ -0.51
HSPG2-209ENST00000480900 HOXA5P20719 270 aa11.88□□□□□ -0.51
HSPG2-209ENST00000480900 GCHFRP30047 84 aa11.88□□□□□ -0.51
HSPG2-209ENST00000480900 RPL7L1Q6DKI1 246 aaKnown RBP11.88□□□□□ -0.51
HSPG2-209ENST00000480900 Q6ZR54 194 aa11.88□□□□□ -0.51
HSPG2-209ENST00000480900 GOLT1AQ6ZVE7 132 aa11.88□□□□□ -0.51
HSPG2-209ENST00000480900 SUN5Q8TC36 379 aa11.88□□□□□ -0.51
HSPG2-209ENST00000480900 ST6GAL2Q96JF0 529 aa11.88□□□□□ -0.51
HSPG2-209ENST00000480900 TP53TG3Q9ULZ0 132 aa11.88□□□□□ -0.51
HSPG2-209ENST00000480900 KLF12Q9Y4X4 402 aa11.88□□□□□ -0.51
HSPG2-209ENST00000480900 IGLV2-18A0A075B6J9 118 aa11.87□□□□□ -0.51
HSPG2-209ENST00000480900 TRGV2A0A075B6R0 118 aa11.87□□□□□ -0.51
HSPG2-209ENST00000480900 H3BNG1 76 aa11.87□□□□□ -0.51
HSPG2-209ENST00000480900 SPINK4O60575 86 aa11.87□□□□□ -0.51
HSPG2-209ENST00000480900 CCL18P55774 89 aa11.87□□□□□ -0.51
HSPG2-209ENST00000480900 ACTR3CQ9C0K3 210 aaPredicted RBP11.87□□□□□ -0.51
HSPG2-209ENST00000480900 SERTM2A0A1B0GWG4 89 aa11.86□□□□□ -0.51
HSPG2-209ENST00000480900 CXorf1O96002 111 aa11.86□□□□□ -0.51
HSPG2-209ENST00000480900 ZNF415Q09FC8 603 aa11.86□□□□□ -0.51
HSPG2-209ENST00000480900 C5orf17Q8NAS9 161 aa11.86□□□□□ -0.51
HSPG2-209ENST00000480900 TMEM167BQ9NRX6 74 aa11.86□□□□□ -0.51
HSPG2-209ENST00000480900 A0A0J9YY99 117 aa11.85□□□□□ -0.51
HSPG2-209ENST00000480900 GNG5P63218 68 aa11.85□□□□□ -0.51
HSPG2-209ENST00000480900 MUC21Q5SSG8 566 aa11.85□□□□□ -0.51
HSPG2-209ENST00000480900 TRAV8-1A0A0A6YYK1 113 aa11.84□□□□□ -0.51
HSPG2-209ENST00000480900 TAAR5O14804 337 aa11.84□□□□□ -0.51
HSPG2-209ENST00000480900 RTL8CO15255 209 aa11.84□□□□□ -0.51
HSPG2-209ENST00000480900 ARPC5O15511 151 aa11.84□□□□□ -0.51
HSPG2-209ENST00000480900 TDRG1Q3Y452 100 aa11.84□□□□□ -0.51
HSPG2-209ENST00000480900 FAM159AQ6UWV7 190 aa11.84□□□□□ -0.51
HSPG2-209ENST00000480900 ZNRF2Q8NHG8 242 aa11.84□□□□□ -0.51
HSPG2-209ENST00000480900 LINC00588Q9Y4M8 146 aa11.84□□□□□ -0.51
HSPG2-209ENST00000480900 HECTD4Q9Y4D8 3996 aa11.84□□□□□ -0.51
HSPG2-209ENST00000480900 TRGV11A0A075B6L2 103 aa11.83□□□□□ -0.52
HSPG2-209ENST00000480900 K7EQM0 130 aa11.83□□□□□ -0.52
HSPG2-209ENST00000480900 TCRAP04437 139 aa11.83□□□□□ -0.52
HSPG2-209ENST00000480900 SSX7Q7RTT5 188 aa11.83□□□□□ -0.52
HSPG2-209ENST00000480900 TVP23CQ96ET8 276 aa11.83□□□□□ -0.52
HSPG2-209ENST00000480900 TREM1Q9NP99 234 aa11.83□□□□□ -0.52
HSPG2-209ENST00000480900 MRPL16Q9NX20 251 aaKnown RBP11.83□□□□□ -0.52
HSPG2-209ENST00000480900 TRAV21A0A0B4J279 112 aa11.82□□□□□ -0.52
HSPG2-209ENST00000480900 CTXND1A0A1B0GTU2 59 aa11.82□□□□□ -0.52
HSPG2-209ENST00000480900 GGTLC3B5MD39 225 aa11.82□□□□□ -0.52
HSPG2-209ENST00000480900 TMEM183BQ1AE95 376 aa11.82□□□□□ -0.52
HSPG2-209ENST00000480900 AKR1C8PQ5T2L2 129 aa11.82□□□□□ -0.52
HSPG2-209ENST00000480900 TMEM183AQ8IXX5 376 aa11.82□□□□□ -0.52
HSPG2-209ENST00000480900 SPXQ9BT56 116 aa11.82□□□□□ -0.52
HSPG2-209ENST00000480900 NDFIP1Q9BT67 221 aa11.82□□□□□ -0.52
HSPG2-209ENST00000480900 MDFICQ9P1T7 246 aa11.82□□□□□ -0.52
HSPG2-209ENST00000480900 A0A1W2PRE2 83 aa11.81□□□□□ -0.52
HSPG2-209ENST00000480900 F6UZH7 168 aa11.81□□□□□ -0.52
HSPG2-209ENST00000480900 SUMO1P63165 101 aaKnown RBP11.81□□□□□ -0.52
HSPG2-209ENST00000480900 ZNF726P1Q15940 193 aa11.81□□□□□ -0.52
HSPG2-209ENST00000480900 SOHLH1Q5JUK2 328 aa11.81□□□□□ -0.52
HSPG2-209ENST00000480900 VSIG2Q96IQ7 327 aa11.81□□□□□ -0.52
HSPG2-209ENST00000480900 NAGKQ9UJ70 344 aa11.81□□□□□ -0.52
HSPG2-209ENST00000480900 NBDYA0A0U1RRE5 68 aa11.8□□□□□ -0.52
HSPG2-209ENST00000480900 PRSS29PA6NIE9 313 aa11.8□□□□□ -0.52
HSPG2-209ENST00000480900 C1orf134Q5TEV5 83 aa11.8□□□□□ -0.52
HSPG2-209ENST00000480900 IQCF2Q8IXL9 164 aa11.8□□□□□ -0.52
HSPG2-209ENST00000480900 CYB561D1Q8N8Q1 229 aa11.8□□□□□ -0.52
HSPG2-209ENST00000480900 CYTL1Q9NRR1 136 aa11.8□□□□□ -0.52
HSPG2-209ENST00000480900 EPDR1Q9UM22 224 aa11.8□□□□□ -0.52
HSPG2-209ENST00000480900 FBLL1A6NHQ2 334 aaKnown RBP11.79□□□□□ -0.52
HSPG2-209ENST00000480900 SMLR1H3BR10 107 aa11.79□□□□□ -0.52
HSPG2-209ENST00000480900 IGLV2-11P01706 119 aa11.79□□□□□ -0.52
HSPG2-209ENST00000480900 SLAQ13239 276 aa11.79□□□□□ -0.52
HSPG2-209ENST00000480900 ZNF345Q14585 488 aa11.79□□□□□ -0.52
HSPG2-209ENST00000480900 TMEM75Q8N9X5 138 aa11.79□□□□□ -0.52
HSPG2-209ENST00000480900 RASL10AQ92737 203 aa11.79□□□□□ -0.52
HSPG2-209ENST00000480900 SGK494Q96LW2 274 aa11.79□□□□□ -0.52
HSPG2-209ENST00000480900 DNAH17Q9UFH2 4485 aa11.78□□□□□ -0.52
HSPG2-209ENST00000480900 A0A096LPF7 62 aa11.78□□□□□ -0.52
HSPG2-209ENST00000480900 IGHV3-16A0A0C4DH30 117 aa11.78□□□□□ -0.52
HSPG2-209ENST00000480900 A0A1B0GVY2 172 aa11.78□□□□□ -0.52
HSPG2-209ENST00000480900 IGHV3-53P01767 116 aa11.78□□□□□ -0.52
HSPG2-209ENST00000480900 FLI1Q01543 452 aaPredicted RBP11.78□□□□□ -0.52
HSPG2-209ENST00000480900 KCNRGQ8N5I3 272 aa11.78□□□□□ -0.52
HSPG2-209ENST00000480900 KCNS1Q96KK3 526 aa11.78□□□□□ -0.52
HSPG2-209ENST00000480900 UPK3BQ9BT76 320 aa11.78□□□□□ -0.52
HSPG2-209ENST00000480900 SDF2L1Q9HCN8 221 aa11.78□□□□□ -0.52
HSPG2-209ENST00000480900 PRO0255Q9UI72 69 aa11.78□□□□□ -0.52
HSPG2-209ENST00000480900 PSG8Q9UQ74 426 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms